RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
SOX2-OT-207ENST00000476964 LZTS3O60299 673 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-207ENST00000476964 BMP2P12643 396 aa9.3□□□□□ -0.92
SOX2-OT-207ENST00000476964 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
SOX2-OT-207ENST00000476964 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
SOX2-OT-207ENST00000476964 RELBQ01201 579 aa9.28□□□□□ -0.92
SOX2-OT-207ENST00000476964 TBC1D9Q6ZT07 1266 aa9.28□□□□□ -0.92
SOX2-OT-207ENST00000476964 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
SOX2-OT-207ENST00000476964 ZNF395Q9H8N7 513 aaPredicted RBP9.28□□□□□ -0.92
SOX2-OT-207ENST00000476964 ZNF777Q9ULD5 760 aaPredicted RBP9.28□□□□□ -0.92
SOX2-OT-207ENST00000476964 MYCP01106 439 aaPredicted RBP9.27□□□□□ -0.93
SOX2-OT-207ENST00000476964 GNRH1P01148 92 aa9.27□□□□□ -0.93
SOX2-OT-207ENST00000476964 SKIP12755 728 aa9.27□□□□□ -0.93
SOX2-OT-207ENST00000476964 CYP2U1Q7Z449 544 aa9.27□□□□□ -0.93
SOX2-OT-207ENST00000476964 A0A1W2PRU2 124 aa9.26□□□□□ -0.93
SOX2-OT-207ENST00000476964 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
SOX2-OT-207ENST00000476964 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-207ENST00000476964 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
SOX2-OT-207ENST00000476964 ATP9BO43861 1147 aa9.25□□□□□ -0.93
SOX2-OT-207ENST00000476964 CTSOP43234 321 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-207ENST00000476964 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
SOX2-OT-207ENST00000476964 INSM2Q96T92 566 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-207ENST00000476964 ESF1Q9H501 851 aaKnown RBP9.25□□□□□ -0.93
SOX2-OT-207ENST00000476964 USP17L5A8MUK1 530 aa9.24□□□□□ -0.93
SOX2-OT-207ENST00000476964 RNF144AP50876 292 aaPredicted RBP9.24□□□□□ -0.93
SOX2-OT-207ENST00000476964 CLN3Q13286 438 aa9.24□□□□□ -0.93
SOX2-OT-207ENST00000476964 TFIP11Q9UBB9 837 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-207ENST00000476964 DNMT3LQ9UJW3 386 aa9.24□□□□□ -0.93
SOX2-OT-207ENST00000476964 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
SOX2-OT-207ENST00000476964 HRH3Q9Y5N1 445 aa9.24□□□□□ -0.93
SOX2-OT-207ENST00000476964 NCOA4Q13772 614 aa9.23□□□□□ -0.93
SOX2-OT-207ENST00000476964 PPP1R12CQ9BZL4 782 aa9.23□□□□□ -0.93
SOX2-OT-207ENST00000476964 PALM3A6NDB9 673 aaPredicted RBP9.22□□□□□ -0.93
SOX2-OT-207ENST00000476964 GPC1P35052 558 aa9.22□□□□□ -0.93
SOX2-OT-207ENST00000476964 EML3Q32P44 896 aa9.22□□□□□ -0.93
SOX2-OT-207ENST00000476964 FOXD4L5Q5VV16 416 aaPredicted RBP9.22□□□□□ -0.93
SOX2-OT-207ENST00000476964 RNF217Q8TC41 542 aa9.22□□□□□ -0.93
SOX2-OT-207ENST00000476964 XAGE2Q96GT9 111 aa9.22□□□□□ -0.93
SOX2-OT-207ENST00000476964 SOBPA7XYQ1 873 aa9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 IL2RAP01589 272 aa9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 ZNF775Q96BV0 537 aaPredicted RBP9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 ESYT1Q9BSJ8 1104 aa9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 ARHGEF10LQ9HCE6 1279 aa9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 NOD1Q9Y239 953 aa9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 MAFBQ9Y5Q3 323 aaPredicted RBP9.21□□□□□ -0.94
SOX2-OT-207ENST00000476964 USP17L3A6NCW0 530 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 USP17L4A6NCW7 530 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 WASLO00401 505 aaPredicted RBP9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 MAN1A2O60476 641 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 SCNN1DP51172 638 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 USP17L1Q7RTZ2 530 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 GRIP2Q9C0E4 1043 aa9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 POLMQ9NP87 494 aaPredicted RBP9.2□□□□□ -0.94
SOX2-OT-207ENST00000476964 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
SOX2-OT-207ENST00000476964 ZBTB7BO15156 539 aaPredicted RBP9.19□□□□□ -0.94
SOX2-OT-207ENST00000476964 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
SOX2-OT-207ENST00000476964 CNKSR1Q969H4 720 aa9.19□□□□□ -0.94
SOX2-OT-207ENST00000476964 ETNK1Q9HBU6 452 aa9.19□□□□□ -0.94
SOX2-OT-207ENST00000476964 ESCO1Q5FWF5 840 aa9.18□□□□□ -0.94
SOX2-OT-207ENST00000476964 MEN1O00255 615 aa9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 STAU1O95793 577 aaKnown RBP9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 INHAP05111 366 aa9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 CENPCQ03188 943 aa9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 CFAP70Q5T0N1 1121 aa9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 KANK4Q5T7N3 995 aaPredicted RBP9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 NPAS3Q8IXF0 933 aa9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 RAB6BQ9NRW1 208 aa9.17□□□□□ -0.94
SOX2-OT-207ENST00000476964 TMEM229AB2RXF0 380 aa9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 GTF2IP78347 998 aa9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 CLDN10P78369 228 aa9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 TRIM50Q86XT4 487 aa9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 SLC4A9Q96Q91 983 aa9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 NXF1Q9UBU9 619 aaKnown RBP9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 MKRN1Q9UHC7 482 aaKnown RBP9.16□□□□□ -0.94
SOX2-OT-207ENST00000476964 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-207ENST00000476964 DKK1O94907 266 aa9.15□□□□□ -0.94
SOX2-OT-207ENST00000476964 GDF10P55107 478 aa9.15□□□□□ -0.94
SOX2-OT-207ENST00000476964 LYSMD3Q7Z3D4 306 aa9.15□□□□□ -0.94
SOX2-OT-207ENST00000476964 SLC35F4A4IF30 521 aa9.14□□□□□ -0.95
SOX2-OT-207ENST00000476964 SPATA31C2B4DYI2 1134 aa9.14□□□□□ -0.95
SOX2-OT-207ENST00000476964 PTSQ03393 145 aa9.14□□□□□ -0.95
SOX2-OT-207ENST00000476964 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
SOX2-OT-207ENST00000476964 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
SOX2-OT-207ENST00000476964 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
SOX2-OT-207ENST00000476964 LMOD1P29536 600 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-207ENST00000476964 ATP1A2P50993 1020 aa9.13□□□□□ -0.95
SOX2-OT-207ENST00000476964 NFX1Q12986 1120 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-207ENST00000476964 WDR44Q5JSH3 913 aa9.13□□□□□ -0.95
SOX2-OT-207ENST00000476964 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
SOX2-OT-207ENST00000476964 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
SOX2-OT-207ENST00000476964 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
SOX2-OT-207ENST00000476964 MTFR1Q15390 333 aa9.12□□□□□ -0.95
SOX2-OT-207ENST00000476964 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
SOX2-OT-207ENST00000476964 H3BM21 787 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms