RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 SKIP12755 728 aa7.46□□□□□ -1.22
ITGA4-208ENST00000476824 CTSOP43234 321 aaPredicted RBP7.46□□□□□ -1.22
ITGA4-208ENST00000476824 FIGNL2A6NMB9 653 aa7.45□□□□□ -1.22
ITGA4-208ENST00000476824 SPINT1O43278 529 aa7.45□□□□□ -1.22
ITGA4-208ENST00000476824 PTGIRP43119 386 aa7.45□□□□□ -1.22
ITGA4-208ENST00000476824 TBC1D9Q6ZT07 1266 aa7.45□□□□□ -1.22
ITGA4-208ENST00000476824 CCDC125Q86Z20 511 aa7.45□□□□□ -1.22
ITGA4-208ENST00000476824 DEPDC4Q8N2C3 294 aa7.45□□□□□ -1.22
ITGA4-208ENST00000476824 KIFC2Q96AC6 838 aa7.45□□□□□ -1.22
ITGA4-208ENST00000476824 SOS2Q07890 1332 aaPredicted RBP7.45□□□□□ -1.22
ITGA4-208ENST00000476824 ATP5J2-PTCD1G3V325 749 aa7.44□□□□□ -1.22
ITGA4-208ENST00000476824 ZMYND15Q9H091 742 aa7.44□□□□□ -1.22
ITGA4-208ENST00000476824 ARHGEF10LQ9HCE6 1279 aa7.44□□□□□ -1.22
ITGA4-208ENST00000476824 RAB6BQ9NRW1 208 aa7.44□□□□□ -1.22
ITGA4-208ENST00000476824 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
ITGA4-208ENST00000476824 A0A1W2PRU2 124 aa7.43□□□□□ -1.22
ITGA4-208ENST00000476824 TTLL8A6PVC2 850 aa7.43□□□□□ -1.22
ITGA4-208ENST00000476824 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
ITGA4-208ENST00000476824 CALR3Q96L12 384 aaKnown RBP7.43□□□□□ -1.22
ITGA4-208ENST00000476824 ESF1Q9H501 851 aaKnown RBP7.43□□□□□ -1.22
ITGA4-208ENST00000476824 POLMQ9NP87 494 aaPredicted RBP7.43□□□□□ -1.22
ITGA4-208ENST00000476824 MEN1O00255 615 aa7.42□□□□□ -1.22
ITGA4-208ENST00000476824 MAN1A2O60476 641 aa7.42□□□□□ -1.22
ITGA4-208ENST00000476824 FOXD4L5Q5VV16 416 aaPredicted RBP7.42□□□□□ -1.22
ITGA4-208ENST00000476824 CYP2U1Q7Z449 544 aa7.42□□□□□ -1.22
ITGA4-208ENST00000476824 ZNF775Q96BV0 537 aaPredicted RBP7.42□□□□□ -1.22
ITGA4-208ENST00000476824 USP17L5A8MUK1 530 aa7.41□□□□□ -1.22
ITGA4-208ENST00000476824 USP4Q13107 963 aa7.41□□□□□ -1.22
ITGA4-208ENST00000476824 NCOA4Q13772 614 aa7.41□□□□□ -1.22
ITGA4-208ENST00000476824 MAP7D1Q3KQU3 841 aa7.41□□□□□ -1.22
ITGA4-208ENST00000476824 C14orf37Q86TY3 774 aa7.4□□□□□ -1.22
ITGA4-208ENST00000476824 RNF217Q8TC41 542 aa7.4□□□□□ -1.22
ITGA4-208ENST00000476824 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
ITGA4-208ENST00000476824 USP17L3A6NCW0 530 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 USP17L4A6NCW7 530 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 ATP9BO43861 1147 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 IL2RAP01589 272 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 VEGFBP49765 207 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 USP17L1Q7RTZ2 530 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 NFATC2IPQ8NCF5 419 aa7.39□□□□□ -1.23
ITGA4-208ENST00000476824 ARID3CA6NKF2 412 aa7.38□□□□□ -1.23
ITGA4-208ENST00000476824 EML3Q32P44 896 aa7.38□□□□□ -1.23
ITGA4-208ENST00000476824 TRIM52Q96A61 297 aa7.38□□□□□ -1.23
ITGA4-208ENST00000476824 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
ITGA4-208ENST00000476824 PALM3A6NDB9 673 aaPredicted RBP7.37□□□□□ -1.23
ITGA4-208ENST00000476824 GNRH1P01148 92 aa7.37□□□□□ -1.23
ITGA4-208ENST00000476824 SCNN1DP51172 638 aa7.37□□□□□ -1.23
ITGA4-208ENST00000476824 CLN3Q13286 438 aa7.37□□□□□ -1.23
ITGA4-208ENST00000476824 CNKSR1Q969H4 720 aa7.37□□□□□ -1.23
ITGA4-208ENST00000476824 NLRP3Q96P20 1036 aa7.37□□□□□ -1.23
ITGA4-208ENST00000476824 PPP1R12CQ9BZL4 782 aa7.37□□□□□ -1.23
ITGA4-208ENST00000476824 PCDHGA11Q9Y5H2 935 aa7.37□□□□□ -1.23
ITGA4-208ENST00000476824 RHOQP17081 205 aa7.36□□□□□ -1.23
ITGA4-208ENST00000476824 RNF144AP50876 292 aaPredicted RBP7.36□□□□□ -1.23
ITGA4-208ENST00000476824 GTF2IP78347 998 aa7.36□□□□□ -1.23
ITGA4-208ENST00000476824 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.23
ITGA4-208ENST00000476824 PRICKLE2Q7Z3G6 844 aa7.36□□□□□ -1.23
ITGA4-208ENST00000476824 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
ITGA4-208ENST00000476824 MAFBQ9Y5Q3 323 aaPredicted RBP7.36□□□□□ -1.23
ITGA4-208ENST00000476824 CENPCQ03188 943 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 PTSQ03393 145 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 PLEKHM2Q8IWE5 1019 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 SIRT1Q96EB6 747 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 XAGE2Q96GT9 111 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 ESYT1Q9BSJ8 1104 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 KIAA1024Q9UPX6 916 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 HRH3Q9Y5N1 445 aa7.35□□□□□ -1.23
ITGA4-208ENST00000476824 TMEM229AB2RXF0 380 aa7.34□□□□□ -1.23
ITGA4-208ENST00000476824 GDF10P55107 478 aa7.34□□□□□ -1.23
ITGA4-208ENST00000476824 CLDN10P78369 228 aa7.34□□□□□ -1.23
ITGA4-208ENST00000476824 PSME1Q06323 249 aa7.34□□□□□ -1.23
ITGA4-208ENST00000476824 SLC27A3Q5K4L6 730 aa7.34□□□□□ -1.23
ITGA4-208ENST00000476824 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
ITGA4-208ENST00000476824 NXF1Q9UBU9 619 aaKnown RBP7.34□□□□□ -1.23
ITGA4-208ENST00000476824 MKRN1Q9UHC7 482 aaKnown RBP7.34□□□□□ -1.23
ITGA4-208ENST00000476824 SERTAD1Q9UHV2 236 aa7.34□□□□□ -1.23
ITGA4-208ENST00000476824 TERTO14746 1132 aaKnown RBP7.33□□□□□ -1.24
ITGA4-208ENST00000476824 LMOD1P29536 600 aaPredicted RBP7.33□□□□□ -1.24
ITGA4-208ENST00000476824 POU4F2Q12837 409 aa7.33□□□□□ -1.24
ITGA4-208ENST00000476824 NFX1Q12986 1120 aaKnown RBP7.33□□□□□ -1.24
ITGA4-208ENST00000476824 CFAP70Q5T0N1 1121 aa7.33□□□□□ -1.24
ITGA4-208ENST00000476824 LYSMD3Q7Z3D4 306 aa7.33□□□□□ -1.24
ITGA4-208ENST00000476824 FHDC1Q9C0D6 1143 aaPredicted RBP7.33□□□□□ -1.24
ITGA4-208ENST00000476824 GRIP2Q9C0E4 1043 aa7.33□□□□□ -1.24
ITGA4-208ENST00000476824 SENP3-EIF4A1A0A087X0R7 540 aa7.32□□□□□ -1.24
ITGA4-208ENST00000476824 ZBTB7BO15156 539 aaPredicted RBP7.32□□□□□ -1.24
ITGA4-208ENST00000476824 LZTS3O60299 673 aaPredicted RBP7.32□□□□□ -1.24
ITGA4-208ENST00000476824 INHAP05111 366 aa7.32□□□□□ -1.24
ITGA4-208ENST00000476824 RFX1P22670 979 aa7.32□□□□□ -1.24
ITGA4-208ENST00000476824 ESCO1Q5FWF5 840 aa7.32□□□□□ -1.24
ITGA4-208ENST00000476824 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.32□□□□□ -1.24
ITGA4-208ENST00000476824 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 GPC1P35052 558 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 TLR1Q15399 786 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 CDCA8Q53HL2 280 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 OGFOD1Q8N543 542 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 CCDC155Q8N6L0 562 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 TPCN2Q8NHX9 752 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 ZNF594Q96JF6 807 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms