RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 SHANK3Q9BYB0 1731 aa18.61■□□□□ 0.57
SOD1-204ENST00000476106 SYT17Q9BSW7 474 aa18.6■□□□□ 0.57
SOD1-204ENST00000476106 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
SOD1-204ENST00000476106 UTRNP46939 3433 aa18.59■□□□□ 0.57
SOD1-204ENST00000476106 MTHFSP49914 203 aa18.58■□□□□ 0.56
SOD1-204ENST00000476106 BARGINQ6ZT62 677 aa18.57■□□□□ 0.56
SOD1-204ENST00000476106 SBF2Q86WG5 1849 aa18.57■□□□□ 0.56
SOD1-204ENST00000476106 MEGF6O75095 1541 aa18.56■□□□□ 0.56
SOD1-204ENST00000476106 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
SOD1-204ENST00000476106 FHDC1Q9C0D6 1143 aaPredicted RBP18.56■□□□□ 0.56
SOD1-204ENST00000476106 THRAP3Q9Y2W1 955 aaKnown RBP18.56■□□□□ 0.56
SOD1-204ENST00000476106 CHD4Q14839 1912 aa18.56■□□□□ 0.56
SOD1-204ENST00000476106 PTGER2P43116 358 aa18.55■□□□□ 0.56
SOD1-204ENST00000476106 NBPF6Q5VWK0 638 aa18.55■□□□□ 0.56
SOD1-204ENST00000476106 NBPF4Q96M43 638 aa18.55■□□□□ 0.56
SOD1-204ENST00000476106 VIRMAQ69YN4 1812 aaKnown RBP18.55■□□□□ 0.56
SOD1-204ENST00000476106 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
SOD1-204ENST00000476106 COL3A1P02461 1466 aaPredicted RBP18.54■□□□□ 0.56
SOD1-204ENST00000476106 ZBTB7AO95365 584 aa18.54■□□□□ 0.56
SOD1-204ENST00000476106 TNS2Q63HR2 1409 aa18.54■□□□□ 0.56
SOD1-204ENST00000476106 PPP2R1AP30153 589 aa18.53■□□□□ 0.56
SOD1-204ENST00000476106 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.56
SOD1-204ENST00000476106 IL2RBP14784 551 aa18.52■□□□□ 0.56
SOD1-204ENST00000476106 PLSCR1O15162 318 aa18.51■□□□□ 0.55
SOD1-204ENST00000476106 DDB1Q16531 1140 aa18.51■□□□□ 0.55
SOD1-204ENST00000476106 EYA1Q99502 592 aa18.51■□□□□ 0.55
SOD1-204ENST00000476106 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
SOD1-204ENST00000476106 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
SOD1-204ENST00000476106 CFAP53Q96M91 514 aa18.49■□□□□ 0.55
SOD1-204ENST00000476106 CDCA7Q9BWT1 371 aaPredicted RBP18.49■□□□□ 0.55
SOD1-204ENST00000476106 OVOS2A0A0G2JMS6 1433 aa18.49■□□□□ 0.55
SOD1-204ENST00000476106 NCAPD2Q15021 1401 aa18.48■□□□□ 0.55
SOD1-204ENST00000476106 CEP350Q5VT06 3117 aa18.47■□□□□ 0.55
SOD1-204ENST00000476106 U2SURPO15042 1029 aaKnown RBP18.47■□□□□ 0.55
SOD1-204ENST00000476106 DIAPH1O60610 1272 aaKnown RBP18.47■□□□□ 0.55
SOD1-204ENST00000476106 GPR162Q16538 588 aa18.47■□□□□ 0.55
SOD1-204ENST00000476106 AEBP1Q8IUX7 1158 aa18.47■□□□□ 0.55
SOD1-204ENST00000476106 BCL11BQ9C0K0 894 aaPredicted RBP18.47■□□□□ 0.55
SOD1-204ENST00000476106 PDGFDQ9GZP0 370 aaPredicted RBP18.47■□□□□ 0.55
SOD1-204ENST00000476106 ANO8Q9HCE9 1232 aaPredicted RBP18.47■□□□□ 0.55
SOD1-204ENST00000476106 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
SOD1-204ENST00000476106 IGSF1Q8N6C5 1336 aa18.47■□□□□ 0.55
SOD1-204ENST00000476106 TATP17735 454 aaPredicted RBP18.46■□□□□ 0.55
SOD1-204ENST00000476106 IL13P35225 146 aa18.46■□□□□ 0.55
SOD1-204ENST00000476106 RALBP1Q15311 655 aa18.46■□□□□ 0.55
SOD1-204ENST00000476106 NHSQ6T4R5 1651 aa18.45■□□□□ 0.54
SOD1-204ENST00000476106 ITGB4P16144 1822 aa18.45■□□□□ 0.54
SOD1-204ENST00000476106 EXOC5O00471 708 aa18.45■□□□□ 0.54
SOD1-204ENST00000476106 HMOX1P09601 288 aa18.45■□□□□ 0.54
SOD1-204ENST00000476106 MTFR1LQ9H019 292 aa18.45■□□□□ 0.54
SOD1-204ENST00000476106 TOGARAM1Q9Y4F4 1720 aa18.45■□□□□ 0.54
SOD1-204ENST00000476106 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
SOD1-204ENST00000476106 DDX54Q8TDD1 881 aaKnown RBP18.44■□□□□ 0.54
SOD1-204ENST00000476106 BTAF1O14981 1849 aa18.44■□□□□ 0.54
SOD1-204ENST00000476106 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
SOD1-204ENST00000476106 PRKRIP1Q9H875 184 aaPredicted RBP18.43■□□□□ 0.54
SOD1-204ENST00000476106 MARCH10Q8NA82 808 aaPredicted RBP18.42■□□□□ 0.54
SOD1-204ENST00000476106 ARXQ96QS3 562 aa18.42■□□□□ 0.54
SOD1-204ENST00000476106 STK32BQ9NY57 414 aa18.42■□□□□ 0.54
SOD1-204ENST00000476106 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
SOD1-204ENST00000476106 HSPA6P17066 643 aa18.41■□□□□ 0.54
SOD1-204ENST00000476106 ZCRB1Q8TBF4 217 aaKnown RBP18.41■□□□□ 0.54
SOD1-204ENST00000476106 SGIP1Q9BQI5 828 aa18.41■□□□□ 0.54
SOD1-204ENST00000476106 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
SOD1-204ENST00000476106 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
SOD1-204ENST00000476106 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
SOD1-204ENST00000476106 RGPD3A6NKT7 1758 aaPredicted RBP18.39■□□□□ 0.53
SOD1-204ENST00000476106 RGPD4Q7Z3J3 1758 aa18.39■□□□□ 0.53
SOD1-204ENST00000476106 SCN11AQ9UI33 1791 aa18.39■□□□□ 0.53
SOD1-204ENST00000476106 ANP32CO43423 234 aa18.38■□□□□ 0.53
SOD1-204ENST00000476106 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
SOD1-204ENST00000476106 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
SOD1-204ENST00000476106 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
SOD1-204ENST00000476106 KDRP35968 1356 aa18.38■□□□□ 0.53
SOD1-204ENST00000476106 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
SOD1-204ENST00000476106 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
SOD1-204ENST00000476106 PROM2Q8N271 834 aa18.37■□□□□ 0.53
SOD1-204ENST00000476106 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
SOD1-204ENST00000476106 ZNF530Q6P9A1 599 aaPredicted RBP18.34■□□□□ 0.53
SOD1-204ENST00000476106 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
SOD1-204ENST00000476106 CYP27B1O15528 508 aa18.33■□□□□ 0.52
SOD1-204ENST00000476106 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
SOD1-204ENST00000476106 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
SOD1-204ENST00000476106 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
SOD1-204ENST00000476106 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
SOD1-204ENST00000476106 TXNRD1Q16881 649 aa18.31■□□□□ 0.52
SOD1-204ENST00000476106 GRIN3BO60391 1043 aa18.3■□□□□ 0.52
SOD1-204ENST00000476106 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
SOD1-204ENST00000476106 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
SOD1-204ENST00000476106 PHKG2P15735 406 aa18.29■□□□□ 0.52
SOD1-204ENST00000476106 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
SOD1-204ENST00000476106 IFNL2Q8IZJ0 200 aa18.29■□□□□ 0.52
SOD1-204ENST00000476106 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
SOD1-204ENST00000476106 BCL9O00512 1426 aa18.29■□□□□ 0.52
SOD1-204ENST00000476106 LY75O60449 1722 aa18.29■□□□□ 0.52
SOD1-204ENST00000476106 AMOTQ4VCS5 1084 aa18.28■□□□□ 0.52
SOD1-204ENST00000476106 CCDC184Q52MB2 194 aa18.28■□□□□ 0.52
SOD1-204ENST00000476106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
SOD1-204ENST00000476106 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
SOD1-204ENST00000476106 KDM6AO15550 1401 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms