RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 ERBB3P21860 1342 aa26.31■■□□□ 1.8
ITGA4-207ENST00000476089 RGPD5Q99666 1765 aa26.3■■□□□ 1.8
ITGA4-207ENST00000476089 CRYBG1Q9Y4K1 1723 aa26.3■■□□□ 1.8
ITGA4-207ENST00000476089 ABCC6O95255 1503 aa26.3■■□□□ 1.8
ITGA4-207ENST00000476089 CRB1P82279 1406 aa26.29■■□□□ 1.8
ITGA4-207ENST00000476089 TWISTNBQ3B726 338 aaPredicted RBP26.29■■□□□ 1.8
ITGA4-207ENST00000476089 CPDO75976 1380 aa26.29■■□□□ 1.8
ITGA4-207ENST00000476089 NCAPD2Q15021 1401 aa26.29■■□□□ 1.8
ITGA4-207ENST00000476089 VAMP4O75379 141 aa26.28■■□□□ 1.8
ITGA4-207ENST00000476089 HAP1P54257 671 aaPredicted RBP26.28■■□□□ 1.8
ITGA4-207ENST00000476089 PLEKHO1Q53GL0 409 aaPredicted RBP26.28■■□□□ 1.8
ITGA4-207ENST00000476089 KIF16BQ96L93 1317 aa26.28■■□□□ 1.8
ITGA4-207ENST00000476089 NHSL1Q5SYE7 1610 aa26.28■■□□□ 1.8
ITGA4-207ENST00000476089 AMOTQ4VCS5 1084 aa26.28■■□□□ 1.8
ITGA4-207ENST00000476089 PANK1Q8TE04 598 aa26.28■■□□□ 1.8
ITGA4-207ENST00000476089 IPO8O15397 1037 aaKnown RBP26.27■■□□□ 1.8
ITGA4-207ENST00000476089 KIAA0232Q92628 1395 aa26.26■■□□□ 1.79
ITGA4-207ENST00000476089 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
ITGA4-207ENST00000476089 CAMTA1Q9Y6Y1 1673 aa26.26■■□□□ 1.79
ITGA4-207ENST00000476089 ELL2O00472 640 aaPredicted RBP26.25■■□□□ 1.79
ITGA4-207ENST00000476089 FTSJ3Q8IY81 847 aaKnown RBP26.25■■□□□ 1.79
ITGA4-207ENST00000476089 COL18A1P39060 1754 aa26.25■■□□□ 1.79
ITGA4-207ENST00000476089 CSB-PGBD3P0DP91 1061 aa26.25■■□□□ 1.79
ITGA4-207ENST00000476089 CHRNA2Q15822 529 aa26.25■■□□□ 1.79
ITGA4-207ENST00000476089 C8orf58Q8NAV2 365 aa26.25■■□□□ 1.79
ITGA4-207ENST00000476089 COG6Q9Y2V7 657 aa26.25■■□□□ 1.79
ITGA4-207ENST00000476089 NLRP2Q9NX02 1062 aa26.24■■□□□ 1.79
ITGA4-207ENST00000476089 TSPYL4Q9UJ04 414 aa26.24■■□□□ 1.79
ITGA4-207ENST00000476089 DZIP1LQ8IYY4 767 aaKnown RBP26.23■■□□□ 1.79
ITGA4-207ENST00000476089 BRPF1P55201 1214 aaPredicted RBP26.23■■□□□ 1.79
ITGA4-207ENST00000476089 NOB1Q9ULX3 412 aaKnown RBP26.23■■□□□ 1.79
ITGA4-207ENST00000476089 LTBP4Q8N2S1 1624 aa26.22■■□□□ 1.79
ITGA4-207ENST00000476089 AAMPQ13685 434 aa26.22■■□□□ 1.79
ITGA4-207ENST00000476089 ATF7IPQ6VMQ6 1270 aa26.22■■□□□ 1.79
ITGA4-207ENST00000476089 CLUAP1Q96AJ1 413 aa26.22■■□□□ 1.79
ITGA4-207ENST00000476089 AKAP4Q5JQC9 854 aa26.21■■□□□ 1.79
ITGA4-207ENST00000476089 ZNF530Q6P9A1 599 aaPredicted RBP26.21■■□□□ 1.79
ITGA4-207ENST00000476089 PRDM11Q9NQV5 511 aa26.21■■□□□ 1.79
ITGA4-207ENST00000476089 LRRC37A3O60309 1634 aa26.21■■□□□ 1.79
ITGA4-207ENST00000476089 C1orf141Q5JVX7 400 aa26.21■■□□□ 1.79
ITGA4-207ENST00000476089 IL17REQ8NFR9 667 aa26.21■■□□□ 1.79
ITGA4-207ENST00000476089 FAM208AQ9UK61 1670 aaKnown RBP26.2■■□□□ 1.78
ITGA4-207ENST00000476089 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.78
ITGA4-207ENST00000476089 RLBP1P12271 317 aa26.19■■□□□ 1.78
ITGA4-207ENST00000476089 BABAM1Q9NWV8 329 aa26.19■■□□□ 1.78
ITGA4-207ENST00000476089 LMO7Q8WWI1 1683 aa26.19■■□□□ 1.78
ITGA4-207ENST00000476089 TRIM27P14373 513 aa26.18■■□□□ 1.78
ITGA4-207ENST00000476089 TAF7Q15545 349 aaPredicted RBP26.18■■□□□ 1.78
ITGA4-207ENST00000476089 MIS18AQ9NYP9 233 aa26.18■■□□□ 1.78
ITGA4-207ENST00000476089 TNNQ9UQP3 1299 aa26.18■■□□□ 1.78
ITGA4-207ENST00000476089 MRPL50Q8N5N7 158 aaKnown RBP26.18■■□□□ 1.78
ITGA4-207ENST00000476089 MVPQ14764 893 aaKnown RBP26.16■■□□□ 1.78
ITGA4-207ENST00000476089 ROBO1Q9Y6N7 1651 aa26.16■■□□□ 1.78
ITGA4-207ENST00000476089 TATP17735 454 aaPredicted RBP26.16■■□□□ 1.78
ITGA4-207ENST00000476089 ARHGAP45Q92619 1136 aa26.15■■□□□ 1.78
ITGA4-207ENST00000476089 CEMIPQ8WUJ3 1361 aa26.15■■□□□ 1.78
ITGA4-207ENST00000476089 ABCA3Q99758 1704 aa26.14■■□□□ 1.78
ITGA4-207ENST00000476089 KRT24Q2M2I5 525 aa26.14■■□□□ 1.77
ITGA4-207ENST00000476089 CENPQQ7L2Z9 268 aaPredicted RBP26.13■■□□□ 1.77
ITGA4-207ENST00000476089 TCERG1O14776 1098 aaKnown RBP26.11■■□□□ 1.77
ITGA4-207ENST00000476089 TEFQ10587 303 aa26.11■■□□□ 1.77
ITGA4-207ENST00000476089 LGR6Q9HBX8 967 aa26.11■■□□□ 1.77
ITGA4-207ENST00000476089 SPG7Q9UQ90 795 aa26.11■■□□□ 1.77
ITGA4-207ENST00000476089 PLEKHG2Q9H7P9 1386 aa26.11■■□□□ 1.77
ITGA4-207ENST00000476089 ITPRIPQ8IWB1 547 aa26.11■■□□□ 1.77
ITGA4-207ENST00000476089 DDX19BQ9UMR2 479 aa26.11■■□□□ 1.77
ITGA4-207ENST00000476089 AHDC1Q5TGY3 1603 aaPredicted RBP26.1■■□□□ 1.77
ITGA4-207ENST00000476089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.1■■□□□ 1.77
ITGA4-207ENST00000476089 MPRIPQ6WCQ1 1025 aa26.09■■□□□ 1.77
ITGA4-207ENST00000476089 WDR17Q8IZU2 1322 aa26.09■■□□□ 1.77
ITGA4-207ENST00000476089 RNMTO43148 476 aaKnown RBP26.09■■□□□ 1.77
ITGA4-207ENST00000476089 TSHZ2Q9NRE2 1034 aa26.09■■□□□ 1.77
ITGA4-207ENST00000476089 OVOS2A0A0G2JMS6 1433 aa26.09■■□□□ 1.77
ITGA4-207ENST00000476089 SOS1Q07889 1333 aaPredicted RBP26.08■■□□□ 1.77
ITGA4-207ENST00000476089 TOM1L2Q6ZVM7 507 aa26.08■■□□□ 1.77
ITGA4-207ENST00000476089 API5Q9BZZ5 524 aaKnown RBP26.08■■□□□ 1.77
ITGA4-207ENST00000476089 KDM2BQ8NHM5 1336 aa26.08■■□□□ 1.77
ITGA4-207ENST00000476089 TMEM57Q8N5G2 664 aa26.07■■□□□ 1.76
ITGA4-207ENST00000476089 COL5A2P05997 1499 aaPredicted RBP26.05■■□□□ 1.76
ITGA4-207ENST00000476089 EVA1CP58658 441 aa26.05■■□□□ 1.76
ITGA4-207ENST00000476089 MEGF6O75095 1541 aa26.05■■□□□ 1.76
ITGA4-207ENST00000476089 TOM1O60784 492 aa26.04■■□□□ 1.76
ITGA4-207ENST00000476089 CHMP4BQ9H444 224 aaKnown RBP26.04■■□□□ 1.76
ITGA4-207ENST00000476089 BTBD11A6QL63 1104 aa26.03■■□□□ 1.76
ITGA4-207ENST00000476089 STK31Q9BXU1 1019 aa26.03■■□□□ 1.76
ITGA4-207ENST00000476089 VIRMAQ69YN4 1812 aaKnown RBP26.03■■□□□ 1.76
ITGA4-207ENST00000476089 CCDC30Q5VVM6 783 aa26.02■■□□□ 1.76
ITGA4-207ENST00000476089 IFNL2Q8IZJ0 200 aa26.02■■□□□ 1.76
ITGA4-207ENST00000476089 SLC4A2P04920 1241 aa26.02■■□□□ 1.76
ITGA4-207ENST00000476089 PTPRCP08575 1304 aa26.01■■□□□ 1.75
ITGA4-207ENST00000476089 CHMP4AQ9BY43 222 aa26.01■■□□□ 1.75
ITGA4-207ENST00000476089 STRN4Q9NRL3 753 aa26.01■■□□□ 1.75
ITGA4-207ENST00000476089 ABCC4O15439 1325 aa26■■□□□ 1.75
ITGA4-207ENST00000476089 PHKG2P15735 406 aa26■■□□□ 1.75
ITGA4-207ENST00000476089 CARD10Q9BWT7 1032 aa26■■□□□ 1.75
ITGA4-207ENST00000476089 COL22A1Q8NFW1 1626 aaPredicted RBP25.99■■□□□ 1.75
ITGA4-207ENST00000476089 KDM3BQ7LBC6 1761 aa25.98■■□□□ 1.75
ITGA4-207ENST00000476089 HSP90AB1P08238 724 aaKnown RBP25.98■■□□□ 1.75
ITGA4-207ENST00000476089 PCDHB15Q9Y5E8 787 aa25.98■■□□□ 1.75
ITGA4-207ENST00000476089 IGHDP01880 384 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms