RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-223ENST00000475732 ONECUT3O60422 494 aaPredicted RBP13.49□□□□□ -0.25
DMD-223ENST00000475732 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
DMD-223ENST00000475732 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
DMD-223ENST00000475732 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
DMD-223ENST00000475732 A0A0G2JS52 829 aa13.48□□□□□ -0.25
DMD-223ENST00000475732 MYT1Q01538 1121 aa13.48□□□□□ -0.25
DMD-223ENST00000475732 NBPF6Q5VWK0 638 aa13.48□□□□□ -0.25
DMD-223ENST00000475732 NBPF4Q96M43 638 aa13.48□□□□□ -0.25
DMD-223ENST00000475732 CDCA7Q9BWT1 371 aaPredicted RBP13.48□□□□□ -0.25
DMD-223ENST00000475732 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
DMD-223ENST00000475732 ANP32CO43423 234 aa13.47□□□□□ -0.25
DMD-223ENST00000475732 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
DMD-223ENST00000475732 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
DMD-223ENST00000475732 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
DMD-223ENST00000475732 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
DMD-223ENST00000475732 RGS12O14924 1447 aa13.47□□□□□ -0.25
DMD-223ENST00000475732 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.25
DMD-223ENST00000475732 IL13P35225 146 aa13.46□□□□□ -0.25
DMD-223ENST00000475732 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
DMD-223ENST00000475732 EYA1Q99502 592 aa13.46□□□□□ -0.25
DMD-223ENST00000475732 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
DMD-223ENST00000475732 RGPD1P0DJD0 1748 aa13.45□□□□□ -0.26
DMD-223ENST00000475732 IL2RBP14784 551 aa13.45□□□□□ -0.26
DMD-223ENST00000475732 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
DMD-223ENST00000475732 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
DMD-223ENST00000475732 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
DMD-223ENST00000475732 NCAPD2Q15021 1401 aa13.44□□□□□ -0.26
DMD-223ENST00000475732 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
DMD-223ENST00000475732 DDB1Q16531 1140 aa13.43□□□□□ -0.26
DMD-223ENST00000475732 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
DMD-223ENST00000475732 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
DMD-223ENST00000475732 EXOC5O00471 708 aa13.42□□□□□ -0.26
DMD-223ENST00000475732 U2SURPO15042 1029 aaKnown RBP13.42□□□□□ -0.26
DMD-223ENST00000475732 TATP17735 454 aaPredicted RBP13.42□□□□□ -0.26
DMD-223ENST00000475732 ILDR2Q71H61 639 aa13.42□□□□□ -0.26
DMD-223ENST00000475732 MEGF6O75095 1541 aa13.41□□□□□ -0.26
DMD-223ENST00000475732 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
DMD-223ENST00000475732 SULT6B1Q6IMI4 303 aa13.41□□□□□ -0.26
DMD-223ENST00000475732 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
DMD-223ENST00000475732 OVOS2A0A0G2JMS6 1433 aa13.4□□□□□ -0.26
DMD-223ENST00000475732 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
DMD-223ENST00000475732 KDRP35968 1356 aa13.4□□□□□ -0.26
DMD-223ENST00000475732 TNS2Q63HR2 1409 aa13.39□□□□□ -0.27
DMD-223ENST00000475732 HMOX1P09601 288 aa13.39□□□□□ -0.27
DMD-223ENST00000475732 AEBP1Q8IUX7 1158 aa13.39□□□□□ -0.27
DMD-223ENST00000475732 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
DMD-223ENST00000475732 PKD1L3Q7Z443 1732 aa13.39□□□□□ -0.27
DMD-223ENST00000475732 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
DMD-223ENST00000475732 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
DMD-223ENST00000475732 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
DMD-223ENST00000475732 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
DMD-223ENST00000475732 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
DMD-223ENST00000475732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
DMD-223ENST00000475732 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
DMD-223ENST00000475732 PCDH11XQ9BZA7 1347 aa13.36□□□□□ -0.27
DMD-223ENST00000475732 PCDH11YQ9BZA8 1340 aa13.36□□□□□ -0.27
DMD-223ENST00000475732 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
DMD-223ENST00000475732 FCHSD2O94868 740 aa13.35□□□□□ -0.27
DMD-223ENST00000475732 AMOTQ4VCS5 1084 aa13.35□□□□□ -0.27
DMD-223ENST00000475732 PLEKHO1Q53GL0 409 aaPredicted RBP13.35□□□□□ -0.27
DMD-223ENST00000475732 FAM182BQ5T319 152 aa13.35□□□□□ -0.27
DMD-223ENST00000475732 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
DMD-223ENST00000475732 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
DMD-223ENST00000475732 DDX54Q8TDD1 881 aaKnown RBP13.35□□□□□ -0.27
DMD-223ENST00000475732 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
DMD-223ENST00000475732 HAX1O00165 279 aa13.34□□□□□ -0.27
DMD-223ENST00000475732 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
DMD-223ENST00000475732 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
DMD-223ENST00000475732 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
DMD-223ENST00000475732 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
DMD-223ENST00000475732 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.28
DMD-223ENST00000475732 MRS2Q9HD23 443 aa13.33□□□□□ -0.28
DMD-223ENST00000475732 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
DMD-223ENST00000475732 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
DMD-223ENST00000475732 CYP27B1O15528 508 aa13.32□□□□□ -0.28
DMD-223ENST00000475732 NEFMP07197 916 aa13.32□□□□□ -0.28
DMD-223ENST00000475732 CCDC184Q52MB2 194 aa13.32□□□□□ -0.28
DMD-223ENST00000475732 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
DMD-223ENST00000475732 BCL9O00512 1426 aa13.31□□□□□ -0.28
DMD-223ENST00000475732 EP400Q96L91 3159 aa13.31□□□□□ -0.28
DMD-223ENST00000475732 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
DMD-223ENST00000475732 PHKG2P15735 406 aa13.3□□□□□ -0.28
DMD-223ENST00000475732 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
DMD-223ENST00000475732 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
DMD-223ENST00000475732 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
DMD-223ENST00000475732 MTHFSDQ2M296 383 aaKnown RBP13.29□□□□□ -0.28
DMD-223ENST00000475732 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
DMD-223ENST00000475732 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
DMD-223ENST00000475732 ADAMTS8Q9UP79 889 aa13.29□□□□□ -0.28
DMD-223ENST00000475732 DOT1LQ8TEK3 1739 aa13.29□□□□□ -0.28
DMD-223ENST00000475732 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
DMD-223ENST00000475732 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
DMD-223ENST00000475732 AKAP4Q5JQC9 854 aa13.28□□□□□ -0.28
DMD-223ENST00000475732 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
DMD-223ENST00000475732 PNISRQ8TF01 805 aaKnown RBP13.28□□□□□ -0.28
DMD-223ENST00000475732 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
DMD-223ENST00000475732 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
DMD-223ENST00000475732 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
DMD-223ENST00000475732 ITGB4P16144 1822 aa13.27□□□□□ -0.28
DMD-223ENST00000475732 TRIM37O94972 964 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms