RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TNS2Q63HR2 1409 aa29.62■■■□□ 2.33
MCF2L2-209ENST00000475664 A0A0G2JS52 829 aa29.62■■■□□ 2.33
MCF2L2-209ENST00000475664 TATP17735 454 aaPredicted RBP29.62■■■□□ 2.33
MCF2L2-209ENST00000475664 MYT1Q01538 1121 aa29.62■■■□□ 2.33
MCF2L2-209ENST00000475664 MIER1Q8N108 512 aa29.62■■■□□ 2.33
MCF2L2-209ENST00000475664 RSPH6AQ9H0K4 717 aa29.6■■■□□ 2.33
MCF2L2-209ENST00000475664 CCER2I3L3R5 266 aa29.59■■■□□ 2.33
MCF2L2-209ENST00000475664 WDR43Q15061 677 aaKnown RBP eCLIP29.57■■■□□ 2.32
MCF2L2-209ENST00000475664 DDB1Q16531 1140 aa29.57■■■□□ 2.32
MCF2L2-209ENST00000475664 FCHSD2O94868 740 aa29.56■■■□□ 2.32
MCF2L2-209ENST00000475664 EXOC5O00471 708 aa29.55■■■□□ 2.32
MCF2L2-209ENST00000475664 PNISRQ8TF01 805 aaKnown RBP29.55■■■□□ 2.32
MCF2L2-209ENST00000475664 PRKAR2BP31323 418 aa29.54■■■□□ 2.32
MCF2L2-209ENST00000475664 ZCRB1Q8TBF4 217 aaKnown RBP29.54■■■□□ 2.32
MCF2L2-209ENST00000475664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.54■■■□□ 2.32
MCF2L2-209ENST00000475664 ADAMTS8Q9UP79 889 aa29.52■■■□□ 2.32
MCF2L2-209ENST00000475664 PDE3BQ13370 1112 aa29.5■■■□□ 2.31
MCF2L2-209ENST00000475664 KRT27Q7Z3Y8 459 aa29.5■■■□□ 2.31
MCF2L2-209ENST00000475664 SPG7Q9UQ90 795 aa29.5■■■□□ 2.31
MCF2L2-209ENST00000475664 AMOTQ4VCS5 1084 aa29.49■■■□□ 2.31
MCF2L2-209ENST00000475664 PLEKHO1Q53GL0 409 aaPredicted RBP29.49■■■□□ 2.31
MCF2L2-209ENST00000475664 PLEKHF1Q96S99 279 aa29.49■■■□□ 2.31
MCF2L2-209ENST00000475664 PCDH11XQ9BZA7 1347 aa29.48■■■□□ 2.31
MCF2L2-209ENST00000475664 PCDH11YQ9BZA8 1340 aa29.48■■■□□ 2.31
MCF2L2-209ENST00000475664 MARCH10Q8NA82 808 aaPredicted RBP29.47■■■□□ 2.31
MCF2L2-209ENST00000475664 PHACTR3Q96KR7 559 aa29.47■■■□□ 2.31
MCF2L2-209ENST00000475664 PNNQ9H307 717 aaKnown RBP29.46■■■□□ 2.31
MCF2L2-209ENST00000475664 CYP27B1O15528 508 aa29.45■■■□□ 2.31
MCF2L2-209ENST00000475664 DDX54Q8TDD1 881 aaKnown RBP29.45■■■□□ 2.31
MCF2L2-209ENST00000475664 MTHFSDQ2M296 383 aaKnown RBP29.44■■■□□ 2.3
MCF2L2-209ENST00000475664 ZNF530Q6P9A1 599 aaPredicted RBP29.43■■■□□ 2.3
MCF2L2-209ENST00000475664 ILDR2Q71H61 639 aa29.42■■■□□ 2.3
MCF2L2-209ENST00000475664 BCL9O00512 1426 aa29.41■■■□□ 2.3
MCF2L2-209ENST00000475664 PHKG2P15735 406 aa29.41■■■□□ 2.3
MCF2L2-209ENST00000475664 FAM182BQ5T319 152 aa29.41■■■□□ 2.3
MCF2L2-209ENST00000475664 CCDC146Q8IYE0 955 aa29.41■■■□□ 2.3
MCF2L2-209ENST00000475664 NEFMP07197 916 aa29.4■■■□□ 2.3
MCF2L2-209ENST00000475664 IFNL2Q8IZJ0 200 aa29.4■■■□□ 2.3
MCF2L2-209ENST00000475664 GAS2L2Q8NHY3 880 aa29.4■■■□□ 2.3
MCF2L2-209ENST00000475664 RUNDC1Q96C34 613 aa29.4■■■□□ 2.3
MCF2L2-209ENST00000475664 MAPK8IP3Q9UPT6 1336 aa29.4■■■□□ 2.3
MCF2L2-209ENST00000475664 DLG5Q8TDM6 1919 aa29.39■■■□□ 2.3
MCF2L2-209ENST00000475664 SBF2Q86WG5 1849 aa29.39■■■□□ 2.3
MCF2L2-209ENST00000475664 FAM9BQ8IZU0 186 aa29.39■■■□□ 2.3
MCF2L2-209ENST00000475664 VIRMAQ69YN4 1812 aaKnown RBP29.38■■■□□ 2.29
MCF2L2-209ENST00000475664 DOT1LQ8TEK3 1739 aa29.38■■■□□ 2.29
MCF2L2-209ENST00000475664 TOGARAM1Q9Y4F4 1720 aa29.38■■■□□ 2.29
MCF2L2-209ENST00000475664 NKX1-1Q15270 411 aaPredicted RBP29.37■■■□□ 2.29
MCF2L2-209ENST00000475664 C1orf141Q5JVX7 400 aa29.37■■■□□ 2.29
MCF2L2-209ENST00000475664 ADAMTS7Q9UKP4 1686 aa29.37■■■□□ 2.29
MCF2L2-209ENST00000475664 AKAP4Q5JQC9 854 aa29.36■■■□□ 2.29
MCF2L2-209ENST00000475664 SCN11AQ9UI33 1791 aa29.36■■■□□ 2.29
MCF2L2-209ENST00000475664 FAM196AQ6ZSG2 479 aa29.35■■■□□ 2.29
MCF2L2-209ENST00000475664 NFE2L2Q16236 605 aa29.34■■■□□ 2.29
MCF2L2-209ENST00000475664 MAP3K5Q99683 1374 aa29.34■■■□□ 2.29
MCF2L2-209ENST00000475664 KDM6AO15550 1401 aaPredicted RBP29.34■■■□□ 2.29
MCF2L2-209ENST00000475664 HSP90AB1P08238 724 aaKnown RBP29.33■■■□□ 2.29
MCF2L2-209ENST00000475664 NHSQ6T4R5 1651 aa29.33■■■□□ 2.29
MCF2L2-209ENST00000475664 EP400Q96L91 3159 aa29.31■■■□□ 2.28
MCF2L2-209ENST00000475664 ITGB4P16144 1822 aa29.31■■■□□ 2.28
MCF2L2-209ENST00000475664 GNAT3A8MTJ3 354 aa29.3■■■□□ 2.28
MCF2L2-209ENST00000475664 TMPOP42166 694 aaKnown RBP29.3■■■□□ 2.28
MCF2L2-209ENST00000475664 DCAF5Q96JK2 942 aa29.3■■■□□ 2.28
MCF2L2-209ENST00000475664 KAT6BQ8WYB5 2073 aa29.29■■■□□ 2.28
MCF2L2-209ENST00000475664 MPRIPQ6WCQ1 1025 aa29.28■■■□□ 2.28
MCF2L2-209ENST00000475664 APAF1O14727 1248 aa29.27■■■□□ 2.28
MCF2L2-209ENST00000475664 TNS1Q9HBL0 1735 aaKnown RBP29.26■■■□□ 2.27
MCF2L2-209ENST00000475664 ACSBG1Q96GR2 724 aa29.26■■■□□ 2.27
MCF2L2-209ENST00000475664 RRP7AQ9Y3A4 280 aaKnown RBP29.26■■■□□ 2.27
MCF2L2-209ENST00000475664 MRC1P22897 1456 aa29.25■■■□□ 2.27
MCF2L2-209ENST00000475664 RNMTO43148 476 aaKnown RBP29.25■■■□□ 2.27
MCF2L2-209ENST00000475664 HTATSF1O43719 755 aaKnown RBP29.25■■■□□ 2.27
MCF2L2-209ENST00000475664 RIPK4P57078 832 aa29.24■■■□□ 2.27
MCF2L2-209ENST00000475664 LGR6Q9HBX8 967 aa29.24■■■□□ 2.27
MCF2L2-209ENST00000475664 BTAF1O14981 1849 aa29.23■■■□□ 2.27
MCF2L2-209ENST00000475664 IL17REQ8NFR9 667 aa29.23■■■□□ 2.27
MCF2L2-209ENST00000475664 SIPA1L3O60292 1781 aaPredicted RBP29.23■■■□□ 2.27
MCF2L2-209ENST00000475664 CEMIPQ8WUJ3 1361 aa29.23■■■□□ 2.27
MCF2L2-209ENST00000475664 ERVV-2B6SEH9 535 aa29.22■■■□□ 2.27
MCF2L2-209ENST00000475664 KCNQ2O43526 872 aa29.22■■■□□ 2.27
MCF2L2-209ENST00000475664 PRIM1P49642 420 aaKnown RBP29.22■■■□□ 2.27
MCF2L2-209ENST00000475664 TRIM37O94972 964 aa29.21■■■□□ 2.27
MCF2L2-209ENST00000475664 NEUROD2Q15784 382 aa29.21■■■□□ 2.27
MCF2L2-209ENST00000475664 RTF1Q92541 710 aaKnown RBP29.21■■■□□ 2.27
MCF2L2-209ENST00000475664 PTF1AQ7RTS3 328 aa29.2■■■□□ 2.26
MCF2L2-209ENST00000475664 BCL11BQ9C0K0 894 aaPredicted RBP29.2■■■□□ 2.26
MCF2L2-209ENST00000475664 LMOD3Q0VAK6 560 aa29.19■■■□□ 2.26
MCF2L2-209ENST00000475664 DCTN1Q14203 1278 aa29.19■■■□□ 2.26
MCF2L2-209ENST00000475664 MCM10Q7L590 875 aa29.19■■■□□ 2.26
MCF2L2-209ENST00000475664 TRIM35Q9UPQ4 493 aa29.19■■■□□ 2.26
MCF2L2-209ENST00000475664 SYTL4Q96C24 671 aaPredicted RBP29.18■■■□□ 2.26
MCF2L2-209ENST00000475664 SENP3-EIF4A1A0A087X0R7 540 aa29.16■■■□□ 2.26
MCF2L2-209ENST00000475664 CABP4P57796 275 aa29.16■■■□□ 2.26
MCF2L2-209ENST00000475664 NCBP3Q53F19 620 aaKnown RBP29.16■■■□□ 2.26
MCF2L2-209ENST00000475664 SLC52A2Q9HAB3 445 aa29.16■■■□□ 2.26
MCF2L2-209ENST00000475664 TMOD3Q9NYL9 352 aa29.16■■■□□ 2.26
MCF2L2-209ENST00000475664 PIGBQ92521 554 aa29.15■■■□□ 2.26
MCF2L2-209ENST00000475664 NFATC2IPQ8NCF5 419 aa29.14■■■□□ 2.26
MCF2L2-209ENST00000475664 THUMPD2Q9BTF0 503 aaKnown RBP29.14■■■□□ 2.26
MCF2L2-209ENST00000475664 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms