RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 STRN4Q9NRL3 753 aa11.57□□□□□ -0.56
LSAMP-202ENST00000473171 RGPD1P0DJD0 1748 aa11.56□□□□□ -0.56
LSAMP-202ENST00000473171 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
LSAMP-202ENST00000473171 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
LSAMP-202ENST00000473171 POGKQ9P215 609 aa11.56□□□□□ -0.56
LSAMP-202ENST00000473171 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
LSAMP-202ENST00000473171 PPP1R1BQ9UD71 204 aaPredicted RBP11.56□□□□□ -0.56
LSAMP-202ENST00000473171 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
LSAMP-202ENST00000473171 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 DHX57Q6P158 1386 aaKnown RBP11.55□□□□□ -0.56
LSAMP-202ENST00000473171 ADGRB2O60241 1585 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 ANKARQ7Z5J8 1434 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
LSAMP-202ENST00000473171 FAM196AQ6ZSG2 479 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 C14orf93Q9H972 538 aaKnown RBP11.55□□□□□ -0.56
LSAMP-202ENST00000473171 THSD7AQ9UPZ6 1657 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 SPATA31A1Q5TZJ5 1347 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 PRR36Q9H6K5 1346 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 TNS1Q9HBL0 1735 aaKnown RBP11.55□□□□□ -0.56
LSAMP-202ENST00000473171 IFT172Q9UG01 1749 aa11.55□□□□□ -0.56
LSAMP-202ENST00000473171 POTEB3A0JP26 581 aa11.54□□□□□ -0.56
LSAMP-202ENST00000473171 POTEBQ6S5H4 581 aa11.54□□□□□ -0.56
LSAMP-202ENST00000473171 COL14A1Q05707 1796 aaKnown RBP11.54□□□□□ -0.56
LSAMP-202ENST00000473171 KIAA0232Q92628 1395 aa11.54□□□□□ -0.56
LSAMP-202ENST00000473171 MFSD10Q14728 455 aa11.53□□□□□ -0.56
LSAMP-202ENST00000473171 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
LSAMP-202ENST00000473171 PARD3Q8TEW0 1356 aa11.53□□□□□ -0.56
LSAMP-202ENST00000473171 RGPD8O14715 1765 aaPredicted RBP11.52□□□□□ -0.57
LSAMP-202ENST00000473171 ZC3H6P61129 1189 aaKnown RBP11.52□□□□□ -0.57
LSAMP-202ENST00000473171 NBPF8Q3BBV2 869 aa11.52□□□□□ -0.57
LSAMP-202ENST00000473171 NBPF14Q5TI25 921 aa11.52□□□□□ -0.57
LSAMP-202ENST00000473171 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
LSAMP-202ENST00000473171 NGDNQ8NEJ9 315 aaKnown RBP11.52□□□□□ -0.57
LSAMP-202ENST00000473171 SPON1Q9HCB6 807 aa11.52□□□□□ -0.57
LSAMP-202ENST00000473171 TRAK1Q9UPV9 953 aa11.52□□□□□ -0.57
LSAMP-202ENST00000473171 PDE3BQ13370 1112 aa11.51□□□□□ -0.57
LSAMP-202ENST00000473171 MPHOSPH9Q99550 1183 aa11.51□□□□□ -0.57
LSAMP-202ENST00000473171 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
LSAMP-202ENST00000473171 TRPM3Q9HCF6 1732 aaPredicted RBP11.51□□□□□ -0.57
LSAMP-202ENST00000473171 KCNQ2O43526 872 aa11.5□□□□□ -0.57
LSAMP-202ENST00000473171 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
LSAMP-202ENST00000473171 EVA1CP58658 441 aa11.49□□□□□ -0.57
LSAMP-202ENST00000473171 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
LSAMP-202ENST00000473171 MAP3K9P80192 1104 aa11.48□□□□□ -0.57
LSAMP-202ENST00000473171 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
LSAMP-202ENST00000473171 WDR70Q9NW82 654 aa11.48□□□□□ -0.57
LSAMP-202ENST00000473171 NINLQ9Y2I6 1382 aa11.48□□□□□ -0.57
LSAMP-202ENST00000473171 DLC1Q96QB1 1528 aa11.47□□□□□ -0.57
LSAMP-202ENST00000473171 TULP4Q9NRJ4 1543 aa11.47□□□□□ -0.57
LSAMP-202ENST00000473171 SSH2Q76I76 1423 aa11.47□□□□□ -0.57
LSAMP-202ENST00000473171 EIF3AQ14152 1382 aaKnown RBP11.47□□□□□ -0.57
LSAMP-202ENST00000473171 WASLO00401 505 aaPredicted RBP11.47□□□□□ -0.57
LSAMP-202ENST00000473171 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
LSAMP-202ENST00000473171 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
LSAMP-202ENST00000473171 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
LSAMP-202ENST00000473171 TCP11L2Q8N4U5 519 aa11.46□□□□□ -0.57
LSAMP-202ENST00000473171 NUP188Q5SRE5 1749 aa11.46□□□□□ -0.58
LSAMP-202ENST00000473171 RREB1Q92766 1687 aa11.46□□□□□ -0.58
LSAMP-202ENST00000473171 ZNF784Q8NCA9 323 aaPredicted RBP11.45□□□□□ -0.58
LSAMP-202ENST00000473171 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
LSAMP-202ENST00000473171 CRYBG1Q9Y4K1 1723 aa11.45□□□□□ -0.58
LSAMP-202ENST00000473171 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
LSAMP-202ENST00000473171 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
LSAMP-202ENST00000473171 ZBTB7AO95365 584 aa11.44□□□□□ -0.58
LSAMP-202ENST00000473171 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
LSAMP-202ENST00000473171 ZBTB7CA1YPR0 619 aa11.43□□□□□ -0.58
LSAMP-202ENST00000473171 NUDT16Q96DE0 195 aaKnown RBP11.43□□□□□ -0.58
LSAMP-202ENST00000473171 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
LSAMP-202ENST00000473171 ATP7BP35670 1465 aa11.43□□□□□ -0.58
LSAMP-202ENST00000473171 PTF1AQ7RTS3 328 aa11.42□□□□□ -0.58
LSAMP-202ENST00000473171 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
LSAMP-202ENST00000473171 KRTAP3-2Q9BYR7 98 aa11.42□□□□□ -0.58
LSAMP-202ENST00000473171 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
LSAMP-202ENST00000473171 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
LSAMP-202ENST00000473171 EVI5O60447 810 aa11.41□□□□□ -0.58
LSAMP-202ENST00000473171 TSHZ2Q9NRE2 1034 aa11.41□□□□□ -0.58
LSAMP-202ENST00000473171 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
LSAMP-202ENST00000473171 ACEP12821 1306 aa11.4□□□□□ -0.58
LSAMP-202ENST00000473171 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
LSAMP-202ENST00000473171 ABTB2Q8N961 1025 aa11.4□□□□□ -0.58
LSAMP-202ENST00000473171 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
LSAMP-202ENST00000473171 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
LSAMP-202ENST00000473171 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
LSAMP-202ENST00000473171 PTGER2P43116 358 aa11.39□□□□□ -0.59
LSAMP-202ENST00000473171 CDK19Q9BWU1 502 aa11.39□□□□□ -0.59
LSAMP-202ENST00000473171 FHDC1Q9C0D6 1143 aaPredicted RBP11.39□□□□□ -0.59
LSAMP-202ENST00000473171 THRAP3Q9Y2W1 955 aaKnown RBP11.39□□□□□ -0.59
LSAMP-202ENST00000473171 CPDO75976 1380 aa11.39□□□□□ -0.59
LSAMP-202ENST00000473171 CAMK2BQ13554 666 aa11.38□□□□□ -0.59
LSAMP-202ENST00000473171 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
LSAMP-202ENST00000473171 POLR3AO14802 1390 aaPredicted RBP11.38□□□□□ -0.59
LSAMP-202ENST00000473171 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
LSAMP-202ENST00000473171 USP19O94966 1318 aa11.37□□□□□ -0.59
LSAMP-202ENST00000473171 PLSCR1O15162 318 aa11.37□□□□□ -0.59
LSAMP-202ENST00000473171 GCP02774 474 aa11.37□□□□□ -0.59
LSAMP-202ENST00000473171 C1QTNF8P60827 252 aa11.37□□□□□ -0.59
LSAMP-202ENST00000473171 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
LSAMP-202ENST00000473171 DDB1Q16531 1140 aa11.37□□□□□ -0.59
LSAMP-202ENST00000473171 SYT17Q9BSW7 474 aa11.37□□□□□ -0.59
LSAMP-202ENST00000473171 CRB1P82279 1406 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms