RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 C11orf95C9JLR9 678 aaPredicted RBP9.07□□□□□ -0.96
HDAC1-205ENST00000472928 SYT17Q9BSW7 474 aa9.07□□□□□ -0.96
HDAC1-205ENST00000472928 FHDC1Q9C0D6 1143 aaPredicted RBP9.07□□□□□ -0.96
HDAC1-205ENST00000472928 SBF2Q86WG5 1849 aa9.07□□□□□ -0.96
HDAC1-205ENST00000472928 LRRC37A3O60309 1634 aa9.06□□□□□ -0.96
HDAC1-205ENST00000472928 ITSN1Q15811 1721 aa9.06□□□□□ -0.96
HDAC1-205ENST00000472928 CHD4Q14839 1912 aa9.06□□□□□ -0.96
HDAC1-205ENST00000472928 EFCAB3Q8N7B9 438 aa9.06□□□□□ -0.96
HDAC1-205ENST00000472928 ACEP12821 1306 aa9.05□□□□□ -0.96
HDAC1-205ENST00000472928 BCL9O00512 1426 aa9.05□□□□□ -0.96
HDAC1-205ENST00000472928 CRB1P82279 1406 aa9.05□□□□□ -0.96
HDAC1-205ENST00000472928 TOPAZ1Q8N9V7 1692 aa9.05□□□□□ -0.96
HDAC1-205ENST00000472928 CD44P16070 742 aaKnown RBP9.05□□□□□ -0.96
HDAC1-205ENST00000472928 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
HDAC1-205ENST00000472928 CABP2Q9NPB3 220 aa9.05□□□□□ -0.96
HDAC1-205ENST00000472928 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
HDAC1-205ENST00000472928 GCP02774 474 aa9.04□□□□□ -0.96
HDAC1-205ENST00000472928 ABTB2Q8N961 1025 aa9.04□□□□□ -0.96
HDAC1-205ENST00000472928 MARCH10Q8NA82 808 aaPredicted RBP9.04□□□□□ -0.96
HDAC1-205ENST00000472928 PHF12Q96QT6 1004 aa9.04□□□□□ -0.96
HDAC1-205ENST00000472928 CDK19Q9BWU1 502 aa9.04□□□□□ -0.96
HDAC1-205ENST00000472928 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
HDAC1-205ENST00000472928 ARHGEF28Q8N1W1 1705 aaKnown RBP9.04□□□□□ -0.96
HDAC1-205ENST00000472928 TRPM1Q7Z4N2 1603 aa9.04□□□□□ -0.96
HDAC1-205ENST00000472928 MAP3K5Q99683 1374 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 SOX12O15370 315 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 NLRP6P59044 892 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 SLC15A2Q16348 729 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 DDB1Q16531 1140 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 TXNRD1Q16881 649 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 MTFR1LQ9H019 292 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 STK32BQ9NY57 414 aa9.03□□□□□ -0.96
HDAC1-205ENST00000472928 AATKQ6ZMQ8 1374 aa9.02□□□□□ -0.97
HDAC1-205ENST00000472928 PPP1R37O75864 691 aa9.02□□□□□ -0.97
HDAC1-205ENST00000472928 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
HDAC1-205ENST00000472928 L3MBTL2Q969R5 705 aa9.01□□□□□ -0.97
HDAC1-205ENST00000472928 SLIT3O75094 1523 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 COL18A1P39060 1754 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 KCNV2Q8TDN2 545 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 DCAF11Q8TEB1 546 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 ARXQ96QS3 562 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 WDR70Q9NW82 654 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 AXIN2Q9Y2T1 843 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 WNK3Q9BYP7 1800 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 KIAA1210Q9ULL0 1709 aa9□□□□□ -0.97
HDAC1-205ENST00000472928 PAPPAQ13219 1627 aa8.99□□□□□ -0.97
HDAC1-205ENST00000472928 GIGYF1O75420 1035 aaPredicted RBP8.99□□□□□ -0.97
HDAC1-205ENST00000472928 TOM1L2Q6ZVM7 507 aa8.99□□□□□ -0.97
HDAC1-205ENST00000472928 WDR17Q8IZU2 1322 aa8.99□□□□□ -0.97
HDAC1-205ENST00000472928 SHANK3Q9BYB0 1731 aa8.98□□□□□ -0.97
HDAC1-205ENST00000472928 ZBTB7CA1YPR0 619 aa8.98□□□□□ -0.97
HDAC1-205ENST00000472928 ZNF827Q17R98 1081 aa8.98□□□□□ -0.97
HDAC1-205ENST00000472928 CDCA7Q9BWT1 371 aaPredicted RBP8.98□□□□□ -0.97
HDAC1-205ENST00000472928 BRD4O60885 1362 aaPredicted RBP8.98□□□□□ -0.97
HDAC1-205ENST00000472928 USP6P35125 1406 aa8.97□□□□□ -0.97
HDAC1-205ENST00000472928 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
HDAC1-205ENST00000472928 AKAP12Q02952 1782 aa8.97□□□□□ -0.97
HDAC1-205ENST00000472928 CPSF1Q10570 1443 aaKnown RBP8.97□□□□□ -0.97
HDAC1-205ENST00000472928 GPR162Q16538 588 aa8.96□□□□□ -0.98
HDAC1-205ENST00000472928 STAC3Q96MF2 364 aa8.96□□□□□ -0.98
HDAC1-205ENST00000472928 CARD10Q9BWT7 1032 aa8.96□□□□□ -0.98
HDAC1-205ENST00000472928 TNS2Q63HR2 1409 aa8.96□□□□□ -0.98
HDAC1-205ENST00000472928 NHSQ6T4R5 1651 aa8.95□□□□□ -0.98
HDAC1-205ENST00000472928 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
HDAC1-205ENST00000472928 ARHGEF25Q86VW2 580 aa8.95□□□□□ -0.98
HDAC1-205ENST00000472928 MS4A3Q96HJ5 214 aa8.95□□□□□ -0.98
HDAC1-205ENST00000472928 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
HDAC1-205ENST00000472928 PIK3C2AO00443 1686 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 EXOC5O00471 708 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 NLGN2Q8NFZ4 835 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 TMEM106CQ9BVX2 250 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 LRRC4BQ9NT99 713 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 CABP1Q9NZU7 370 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 TRPC6Q9Y210 931 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 COL24A1Q17RW2 1714 aa8.94□□□□□ -0.98
HDAC1-205ENST00000472928 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
HDAC1-205ENST00000472928 YBX3P16989 372 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC1-205ENST00000472928 SRPK2P78362 688 aaKnown RBP8.93□□□□□ -0.98
HDAC1-205ENST00000472928 CCDC7Q96M83 1385 aa8.93□□□□□ -0.98
HDAC1-205ENST00000472928 ABCC6O95255 1503 aa8.93□□□□□ -0.98
HDAC1-205ENST00000472928 RGPD5Q99666 1765 aa8.92□□□□□ -0.98
HDAC1-205ENST00000472928 NFAT5O94916 1531 aa8.92□□□□□ -0.98
HDAC1-205ENST00000472928 PNPLA7Q6ZV29 1317 aa8.92□□□□□ -0.98
HDAC1-205ENST00000472928 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
HDAC1-205ENST00000472928 NBPF1Q3BBV0 1214 aa8.92□□□□□ -0.98
HDAC1-205ENST00000472928 KAT6BQ8WYB5 2073 aa8.92□□□□□ -0.98
HDAC1-205ENST00000472928 BTAF1O14981 1849 aa8.91□□□□□ -0.98
HDAC1-205ENST00000472928 ATP10DQ9P241 1426 aa8.91□□□□□ -0.98
HDAC1-205ENST00000472928 ROCK2O75116 1388 aaKnown RBP8.91□□□□□ -0.98
HDAC1-205ENST00000472928 CENPJQ9HC77 1338 aaPredicted RBP8.91□□□□□ -0.98
HDAC1-205ENST00000472928 SLC16A10Q8TF71 515 aa8.91□□□□□ -0.98
HDAC1-205ENST00000472928 USP47Q96K76 1375 aa8.9□□□□□ -0.98
HDAC1-205ENST00000472928 TTC21BQ7Z4L5 1316 aa8.9□□□□□ -0.98
HDAC1-205ENST00000472928 POLD1P28340 1107 aa8.9□□□□□ -0.98
HDAC1-205ENST00000472928 GOLGA2Q08379 1002 aa8.9□□□□□ -0.98
HDAC1-205ENST00000472928 KCNH5Q8NCM2 988 aa8.9□□□□□ -0.98
HDAC1-205ENST00000472928 QSER1Q2KHR3 1735 aa8.9□□□□□ -0.98
HDAC1-205ENST00000472928 ADCY9O60503 1353 aa8.89□□□□□ -0.99
HDAC1-205ENST00000472928 QRICH2Q9H0J4 1663 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms