RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 GPR182O15218 404 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 GIGYF1O75420 1035 aaPredicted RBP3.98□□□□□ -1.77
XRN1-210ENST00000472697 ATP6V1AP38606 617 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 USP46P62068 366 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 GTF2IP78347 998 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 FANCCQ00597 558 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 CCDC144BQ3MJ40 725 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 DNAAF2Q9NVR5 837 aaKnown RBP3.98□□□□□ -1.77
XRN1-210ENST00000472697 PCDHGA11Q9Y5H2 935 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 C21orf2O43822 256 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 RAB11FIP3O75154 756 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 FMNL1O95466 1100 aaPredicted RBP3.97□□□□□ -1.77
XRN1-210ENST00000472697 HMGB1P09429 215 aaKnown RBP3.97□□□□□ -1.77
XRN1-210ENST00000472697 RACK1P63244 317 aaKnown RBP3.97□□□□□ -1.77
XRN1-210ENST00000472697 C4orf48Q5BLP8 95 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 PACS2Q86VP3 889 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 PMFBP1Q8TBY8 1022 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 UBXN4Q92575 508 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 DUSP9Q99956 384 aaKnown RBP3.97□□□□□ -1.77
XRN1-210ENST00000472697 PRKAG2Q9UGJ0 569 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 PARP2Q9UGN5 583 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 DMGDHQ9UI17 866 aaKnown RBP3.97□□□□□ -1.77
XRN1-210ENST00000472697 LSM11P83369 360 aaKnown RBP eCLIP3.97□□□□□ -1.77
XRN1-210ENST00000472697 ZNF326Q5BKZ1 582 aaKnown RBP3.97□□□□□ -1.77
XRN1-210ENST00000472697 TMEM87AQ8NBN3 555 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.97□□□□□ -1.77
XRN1-210ENST00000472697 NKX2-3Q8TAU0 364 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 C8orf37Q96NL8 207 aa3.97□□□□□ -1.77
XRN1-210ENST00000472697 HIRIP3Q9BW71 556 aaPredicted RBP3.97□□□□□ -1.77
XRN1-210ENST00000472697 A6NHS1 94 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 PSME1Q06323 249 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 EMILIN1Q9Y6C2 1016 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 CTSHP09668 335 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 EAPPQ56P03 285 aaPredicted RBP3.96□□□□□ -1.78
XRN1-210ENST00000472697 JAZF1Q86VZ6 243 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 KLRG1Q96E93 195 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 CAPN10Q9HC96 672 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 KLHL42Q9P2K6 505 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 DCTN4Q9UJW0 460 aa3.96□□□□□ -1.78
XRN1-210ENST00000472697 UNC13AQ9UPW8 1703 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 ATP5J2-PTCD1G3V325 749 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 SWI5Q1ZZU3 235 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 SH3PXD2AQ5TCZ1 1133 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 PI16Q6UXB8 463 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 CHMP7Q8WUX9 453 aaPredicted RBP3.95□□□□□ -1.78
XRN1-210ENST00000472697 CHIC2Q9UKJ5 165 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 CUX2O14529 1486 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 TLL1O43897 1013 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 TCEAL1Q15170 157 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 B4GALNT3Q6L9W6 998 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 TMED8Q6PL24 325 aaPredicted RBP3.95□□□□□ -1.78
XRN1-210ENST00000472697 CERS3Q8IU89 383 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 SCUBE3Q8IX30 993 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 NFATC2IPQ8NCF5 419 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 IRX2Q9BZI1 471 aaPredicted RBP3.95□□□□□ -1.78
XRN1-210ENST00000472697 KANSL2Q9H9L4 492 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 PLA2G2EQ9NZK7 142 aa3.95□□□□□ -1.78
XRN1-210ENST00000472697 MRPL42Q9Y6G3 142 aaKnown RBP3.95□□□□□ -1.78
XRN1-210ENST00000472697 APLP1P51693 650 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 FKBP4Q02790 459 aaKnown RBP eCLIP3.94□□□□□ -1.78
XRN1-210ENST00000472697 PPP4R3BQ5MIZ7 849 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 PPP1R18Q6NYC8 613 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 ANKRD13DQ6ZTN6 518 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 TNS4Q8IZW8 715 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 SIX5Q8N196 739 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 USP3Q9Y6I4 520 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 PSDA5PKW4 1024 aaPredicted RBP3.94□□□□□ -1.78
XRN1-210ENST00000472697 WEE1P30291 646 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 SEC13P55735 322 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 BMS1Q14692 1282 aaKnown RBP3.94□□□□□ -1.78
XRN1-210ENST00000472697 FAM160A2Q8N612 972 aaPredicted RBP3.94□□□□□ -1.78
XRN1-210ENST00000472697 THAP11Q96EK4 314 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 USB1Q9BQ65 265 aaKnown RBP3.94□□□□□ -1.78
XRN1-210ENST00000472697 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 SLC52A1Q9NWF4 448 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 LRFN2Q9ULH4 789 aa3.94□□□□□ -1.78
XRN1-210ENST00000472697 MARCH6O60337 910 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 VAMP1P23763 118 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 EML3Q32P44 896 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 LINC01559Q495D7 138 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 IFFO2Q5TF58 517 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 RGL4Q8IZJ4 473 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 CFHR5Q9BXR6 569 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 TSPAN10Q9H1Z9 355 aaPredicted RBP3.93□□□□□ -1.78
XRN1-210ENST00000472697 A0A1W2PRU2 124 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 TREHO43280 583 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 LDHBP07195 334 aaKnown RBP3.93□□□□□ -1.78
XRN1-210ENST00000472697 IRX6P78412 446 aaPredicted RBP3.93□□□□□ -1.78
XRN1-210ENST00000472697 CBLBQ13191 982 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 MICAL1Q8TDZ2 1067 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 FOXJ1Q92949 421 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 ZSWIM4Q9H7M6 989 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 DOLKQ9UPQ8 538 aa3.93□□□□□ -1.78
XRN1-210ENST00000472697 SCAMP3O14828 347 aaKnown RBP3.92□□□□□ -1.78
XRN1-210ENST00000472697 FZD6O60353 706 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 ERCC3P19447 782 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 EHHADHQ08426 723 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 ORC1Q13415 861 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 BRICD5Q6PL45 260 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 544.4 ms