RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 CYLDQ9NQC7 956 aa10.71□□□□□ -0.69
GTF2B-204ENST00000471296 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
GTF2B-204ENST00000471296 SOCS7O14512 581 aa10.68□□□□□ -0.7
GTF2B-204ENST00000471296 PPFIA3O75145 1194 aa10.68□□□□□ -0.7
GTF2B-204ENST00000471296 ADH1AP07327 375 aa10.68□□□□□ -0.7
GTF2B-204ENST00000471296 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.68□□□□□ -0.7
GTF2B-204ENST00000471296 SEPT12Q8IYM1 358 aa10.68□□□□□ -0.7
GTF2B-204ENST00000471296 TBC1D2BQ9UPU7 963 aa10.68□□□□□ -0.7
GTF2B-204ENST00000471296 POLMQ9NP87 494 aaPredicted RBP10.67□□□□□ -0.7
GTF2B-204ENST00000471296 PTSQ03393 145 aa10.66□□□□□ -0.7
GTF2B-204ENST00000471296 FANCD2Q9BXW9 1451 aa10.66□□□□□ -0.7
GTF2B-204ENST00000471296 CEP164Q9UPV0 1460 aa10.66□□□□□ -0.7
GTF2B-204ENST00000471296 PTGIRP43119 386 aa10.65□□□□□ -0.7
GTF2B-204ENST00000471296 INSM1Q01101 510 aaPredicted RBP10.65□□□□□ -0.7
GTF2B-204ENST00000471296 CUX2O14529 1486 aa10.65□□□□□ -0.7
GTF2B-204ENST00000471296 APBB1O00213 710 aa10.64□□□□□ -0.71
GTF2B-204ENST00000471296 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
GTF2B-204ENST00000471296 RNF217Q8TC41 542 aa10.63□□□□□ -0.71
GTF2B-204ENST00000471296 MRC2Q9UBG0 1479 aa10.62□□□□□ -0.71
GTF2B-204ENST00000471296 VSIG8P0DPA2 414 aa10.62□□□□□ -0.71
GTF2B-204ENST00000471296 SCTRP47872 440 aa10.62□□□□□ -0.71
GTF2B-204ENST00000471296 IRF5Q13568 498 aa10.61□□□□□ -0.71
GTF2B-204ENST00000471296 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
GTF2B-204ENST00000471296 PCDHB11Q9Y5F2 797 aa10.61□□□□□ -0.71
GTF2B-204ENST00000471296 LORP23490 312 aaPredicted RBP10.6□□□□□ -0.71
GTF2B-204ENST00000471296 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
GTF2B-204ENST00000471296 CCDC155Q8N6L0 562 aa10.6□□□□□ -0.71
GTF2B-204ENST00000471296 ATP5J2-PTCD1G3V325 749 aa10.59□□□□□ -0.71
GTF2B-204ENST00000471296 MCCD1P59942 119 aaPredicted RBP10.59□□□□□ -0.71
GTF2B-204ENST00000471296 ERVK-9P63128 1117 aa10.59□□□□□ -0.71
GTF2B-204ENST00000471296 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
GTF2B-204ENST00000471296 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
GTF2B-204ENST00000471296 SLC35F4A4IF30 521 aa10.58□□□□□ -0.72
GTF2B-204ENST00000471296 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
GTF2B-204ENST00000471296 CEP126Q9P2H0 1117 aa10.58□□□□□ -0.72
GTF2B-204ENST00000471296 STK17AQ9UEE5 414 aa10.58□□□□□ -0.72
GTF2B-204ENST00000471296 MEN1O00255 615 aa10.57□□□□□ -0.72
GTF2B-204ENST00000471296 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
GTF2B-204ENST00000471296 SENP3-EIF4A1A0A087X0R7 540 aa10.56□□□□□ -0.72
GTF2B-204ENST00000471296 ABL2P42684 1182 aa10.56□□□□□ -0.72
GTF2B-204ENST00000471296 CCDC85AQ96PX6 553 aaPredicted RBP10.56□□□□□ -0.72
GTF2B-204ENST00000471296 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
GTF2B-204ENST00000471296 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
GTF2B-204ENST00000471296 WDR62O43379 1518 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 A0A1W2PRU2 124 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 VAC14Q08AM6 782 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 PRICKLE2Q7Z3G6 844 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 OSBPL3Q9H4L5 887 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 PRM3Q9NNZ6 103 aa10.55□□□□□ -0.72
GTF2B-204ENST00000471296 KIF21AQ7Z4S6 1674 aa10.54□□□□□ -0.72
GTF2B-204ENST00000471296 RHOQP17081 205 aa10.54□□□□□ -0.72
GTF2B-204ENST00000471296 MCM6Q14566 821 aa10.54□□□□□ -0.72
GTF2B-204ENST00000471296 TSGA10IPQ3SY00 556 aa10.54□□□□□ -0.72
GTF2B-204ENST00000471296 LYSMD3Q7Z3D4 306 aa10.54□□□□□ -0.72
GTF2B-204ENST00000471296 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
GTF2B-204ENST00000471296 ITGA6P23229 1130 aa10.53□□□□□ -0.72
GTF2B-204ENST00000471296 RNF144AP50876 292 aaPredicted RBP10.53□□□□□ -0.72
GTF2B-204ENST00000471296 KRT76Q01546 638 aa10.52□□□□□ -0.73
GTF2B-204ENST00000471296 VWA5B2Q8N398 1253 aa10.52□□□□□ -0.73
GTF2B-204ENST00000471296 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
GTF2B-204ENST00000471296 ARHGEF10LQ9HCE6 1279 aa10.52□□□□□ -0.73
GTF2B-204ENST00000471296 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
GTF2B-204ENST00000471296 CDC14CA4D256 554 aa10.51□□□□□ -0.73
GTF2B-204ENST00000471296 TRAK2O60296 914 aa10.51□□□□□ -0.73
GTF2B-204ENST00000471296 EIF4G2P78344 907 aaKnown RBP eCLIP10.51□□□□□ -0.73
GTF2B-204ENST00000471296 CYP2U1Q7Z449 544 aa10.51□□□□□ -0.73
GTF2B-204ENST00000471296 RAB6BQ9NRW1 208 aa10.51□□□□□ -0.73
GTF2B-204ENST00000471296 URB2Q14146 1524 aaKnown RBP10.5□□□□□ -0.73
GTF2B-204ENST00000471296 NANOS1Q8WY41 292 aaKnown RBP10.5□□□□□ -0.73
GTF2B-204ENST00000471296 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
GTF2B-204ENST00000471296 PHTF2Q8N3S3 785 aa10.49□□□□□ -0.73
GTF2B-204ENST00000471296 CNTNAP3BQ96NU0 1288 aa10.49□□□□□ -0.73
GTF2B-204ENST00000471296 CNTNAP3Q9BZ76 1288 aa10.49□□□□□ -0.73
GTF2B-204ENST00000471296 CUEDC1Q9NWM3 386 aaPredicted RBP10.49□□□□□ -0.73
GTF2B-204ENST00000471296 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
GTF2B-204ENST00000471296 CLN3Q13286 438 aa10.48□□□□□ -0.73
GTF2B-204ENST00000471296 RNFT1Q5M7Z0 435 aa10.48□□□□□ -0.73
GTF2B-204ENST00000471296 NLRP3Q96P20 1036 aa10.48□□□□□ -0.73
GTF2B-204ENST00000471296 COL25A1Q9BXS0 654 aaPredicted RBP10.48□□□□□ -0.73
GTF2B-204ENST00000471296 TOPBP1Q92547 1522 aa10.48□□□□□ -0.73
GTF2B-204ENST00000471296 POU4F2Q12837 409 aa10.47□□□□□ -0.73
GTF2B-204ENST00000471296 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
GTF2B-204ENST00000471296 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
GTF2B-204ENST00000471296 GPC1P35052 558 aa10.46□□□□□ -0.73
GTF2B-204ENST00000471296 SLFNL1Q499Z3 407 aa10.46□□□□□ -0.73
GTF2B-204ENST00000471296 SV2AQ7L0J3 742 aa10.46□□□□□ -0.73
GTF2B-204ENST00000471296 RNF135Q8IUD6 432 aa10.46□□□□□ -0.73
GTF2B-204ENST00000471296 DOLKQ9UPQ8 538 aa10.46□□□□□ -0.73
GTF2B-204ENST00000471296 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
GTF2B-204ENST00000471296 STAU1O95793 577 aaKnown RBP10.45□□□□□ -0.74
GTF2B-204ENST00000471296 MYCP01106 439 aaPredicted RBP10.45□□□□□ -0.74
GTF2B-204ENST00000471296 IL2RAP01589 272 aa10.45□□□□□ -0.74
GTF2B-204ENST00000471296 POM121Q96HA1 1249 aa10.45□□□□□ -0.74
GTF2B-204ENST00000471296 GRIP2Q9C0E4 1043 aa10.45□□□□□ -0.74
GTF2B-204ENST00000471296 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
GTF2B-204ENST00000471296 GNRH1P01148 92 aa10.43□□□□□ -0.74
GTF2B-204ENST00000471296 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
GTF2B-204ENST00000471296 CNKSR1Q969H4 720 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms