RNA–Protein interactions for RNA: ENST00000471274.1

PTPRD-208, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 1,205 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-208ENST00000471274 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
PTPRD-208ENST00000471274 SPATA31A5Q5VU36 1347 aa13.23□□□□□ -0.29
PTPRD-208ENST00000471274 SPATA31A7Q8IWB4 1347 aa13.23□□□□□ -0.29
PTPRD-208ENST00000471274 PKD1L3Q7Z443 1732 aa13.23□□□□□ -0.29
PTPRD-208ENST00000471274 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
PTPRD-208ENST00000471274 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPRD-208ENST00000471274 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
PTPRD-208ENST00000471274 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
PTPRD-208ENST00000471274 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
PTPRD-208ENST00000471274 THSD7AQ9UPZ6 1657 aa13.22□□□□□ -0.29
PTPRD-208ENST00000471274 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
PTPRD-208ENST00000471274 SPATA31A1Q5TZJ5 1347 aa13.21□□□□□ -0.29
PTPRD-208ENST00000471274 GLI3P10071 1580 aa13.21□□□□□ -0.29
PTPRD-208ENST00000471274 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
PTPRD-208ENST00000471274 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
PTPRD-208ENST00000471274 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
PTPRD-208ENST00000471274 DISP2A7MBM2 1401 aa13.21□□□□□ -0.3
PTPRD-208ENST00000471274 NEFMP07197 916 aa13.2□□□□□ -0.3
PTPRD-208ENST00000471274 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
PTPRD-208ENST00000471274 OVOS2A0A0G2JMS6 1433 aa13.2□□□□□ -0.3
PTPRD-208ENST00000471274 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
PTPRD-208ENST00000471274 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
PTPRD-208ENST00000471274 FCHSD2O94868 740 aa13.19□□□□□ -0.3
PTPRD-208ENST00000471274 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
PTPRD-208ENST00000471274 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
PTPRD-208ENST00000471274 EYA1Q99502 592 aa13.19□□□□□ -0.3
PTPRD-208ENST00000471274 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
PTPRD-208ENST00000471274 U2AF1L5P0DN76 240 aaPredicted RBP13.18□□□□□ -0.3
PTPRD-208ENST00000471274 U2AF1Q01081 240 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTPRD-208ENST00000471274 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
PTPRD-208ENST00000471274 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
PTPRD-208ENST00000471274 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
PTPRD-208ENST00000471274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTPRD-208ENST00000471274 CCDC9Q9Y3X0 531 aaKnown RBP13.18□□□□□ -0.3
PTPRD-208ENST00000471274 IL2RBP14784 551 aa13.17□□□□□ -0.3
PTPRD-208ENST00000471274 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
PTPRD-208ENST00000471274 MIER1Q8N108 512 aa13.17□□□□□ -0.3
PTPRD-208ENST00000471274 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
PTPRD-208ENST00000471274 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
PTPRD-208ENST00000471274 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
PTPRD-208ENST00000471274 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
PTPRD-208ENST00000471274 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
PTPRD-208ENST00000471274 MEGF6O75095 1541 aa13.16□□□□□ -0.3
PTPRD-208ENST00000471274 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
PTPRD-208ENST00000471274 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
PTPRD-208ENST00000471274 SHANK3Q9BYB0 1731 aa13.15□□□□□ -0.3
PTPRD-208ENST00000471274 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
PTPRD-208ENST00000471274 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
PTPRD-208ENST00000471274 NGEFQ8N5V2 710 aa13.14□□□□□ -0.31
PTPRD-208ENST00000471274 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
PTPRD-208ENST00000471274 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
PTPRD-208ENST00000471274 RXRBP28702 533 aa13.13□□□□□ -0.31
PTPRD-208ENST00000471274 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
PTPRD-208ENST00000471274 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
PTPRD-208ENST00000471274 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
PTPRD-208ENST00000471274 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
PTPRD-208ENST00000471274 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
PTPRD-208ENST00000471274 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
PTPRD-208ENST00000471274 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
PTPRD-208ENST00000471274 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
PTPRD-208ENST00000471274 HMOX1P09601 288 aa13.11□□□□□ -0.31
PTPRD-208ENST00000471274 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
PTPRD-208ENST00000471274 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
PTPRD-208ENST00000471274 BCL9O00512 1426 aa13.11□□□□□ -0.31
PTPRD-208ENST00000471274 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
PTPRD-208ENST00000471274 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
PTPRD-208ENST00000471274 DDB1Q16531 1140 aa13.1□□□□□ -0.31
PTPRD-208ENST00000471274 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
PTPRD-208ENST00000471274 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
PTPRD-208ENST00000471274 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
PTPRD-208ENST00000471274 PLEKHF1Q96S99 279 aa13.1□□□□□ -0.31
PTPRD-208ENST00000471274 RGS12O14924 1447 aa13.1□□□□□ -0.31
PTPRD-208ENST00000471274 EXOC5O00471 708 aa13.09□□□□□ -0.31
PTPRD-208ENST00000471274 ZCRB1Q8TBF4 217 aaKnown RBP13.09□□□□□ -0.31
PTPRD-208ENST00000471274 RGS17Q9UGC6 210 aaPredicted RBP13.09□□□□□ -0.31
PTPRD-208ENST00000471274 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
PTPRD-208ENST00000471274 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
PTPRD-208ENST00000471274 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
PTPRD-208ENST00000471274 MAP3K5Q99683 1374 aa13.08□□□□□ -0.31
PTPRD-208ENST00000471274 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
PTPRD-208ENST00000471274 A0A0G2JS52 829 aa13.08□□□□□ -0.32
PTPRD-208ENST00000471274 HTATSF1O43719 755 aaKnown RBP13.08□□□□□ -0.32
PTPRD-208ENST00000471274 MYT1Q01538 1121 aa13.08□□□□□ -0.32
PTPRD-208ENST00000471274 AKAP4Q5JQC9 854 aa13.08□□□□□ -0.32
PTPRD-208ENST00000471274 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
PTPRD-208ENST00000471274 IFNL2Q8IZJ0 200 aa13.07□□□□□ -0.32
PTPRD-208ENST00000471274 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
PTPRD-208ENST00000471274 MRC1P22897 1456 aa13.07□□□□□ -0.32
PTPRD-208ENST00000471274 DOT1LQ8TEK3 1739 aa13.06□□□□□ -0.32
PTPRD-208ENST00000471274 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
PTPRD-208ENST00000471274 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
PTPRD-208ENST00000471274 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
PTPRD-208ENST00000471274 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
PTPRD-208ENST00000471274 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
PTPRD-208ENST00000471274 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
PTPRD-208ENST00000471274 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
PTPRD-208ENST00000471274 PHKG2P15735 406 aa13.04□□□□□ -0.32
PTPRD-208ENST00000471274 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
PTPRD-208ENST00000471274 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
PTPRD-208ENST00000471274 CCDC27Q2M243 656 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms