RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 CCDC125Q86Z20 511 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 RGS12O14924 1447 aa12.45□□□□□ -0.42
FN1-216ENST00000469569 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
FN1-216ENST00000469569 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
FN1-216ENST00000469569 EVX2Q03828 476 aa12.45□□□□□ -0.42
FN1-216ENST00000469569 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
FN1-216ENST00000469569 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
FN1-216ENST00000469569 MAP3K19Q56UN5 1328 aa12.44□□□□□ -0.42
FN1-216ENST00000469569 KRT27Q7Z3Y8 459 aa12.44□□□□□ -0.42
FN1-216ENST00000469569 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
FN1-216ENST00000469569 GLI3P10071 1580 aa12.43□□□□□ -0.42
FN1-216ENST00000469569 ERBB3P21860 1342 aa12.43□□□□□ -0.42
FN1-216ENST00000469569 WASHC2AQ641Q2 1341 aa12.43□□□□□ -0.42
FN1-216ENST00000469569 HOXC9P31274 260 aa12.43□□□□□ -0.42
FN1-216ENST00000469569 MORC1Q86VD1 984 aa12.43□□□□□ -0.42
FN1-216ENST00000469569 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
FN1-216ENST00000469569 SMG6Q86US8 1419 aaKnown RBP12.43□□□□□ -0.42
FN1-216ENST00000469569 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
FN1-216ENST00000469569 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
FN1-216ENST00000469569 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
FN1-216ENST00000469569 ANKRD24Q8TF21 1146 aa12.42□□□□□ -0.42
FN1-216ENST00000469569 NLRP2Q9NX02 1062 aa12.42□□□□□ -0.42
FN1-216ENST00000469569 USP35Q9P2H5 1018 aa12.42□□□□□ -0.42
FN1-216ENST00000469569 COL18A1P39060 1754 aa12.42□□□□□ -0.42
FN1-216ENST00000469569 FLT4P35916 1363 aa12.42□□□□□ -0.42
FN1-216ENST00000469569 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
FN1-216ENST00000469569 MAP3K13O43283 966 aa12.41□□□□□ -0.42
FN1-216ENST00000469569 INSRP06213 1382 aa12.41□□□□□ -0.42
FN1-216ENST00000469569 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
FN1-216ENST00000469569 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
FN1-216ENST00000469569 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
FN1-216ENST00000469569 DDB1Q16531 1140 aa12.39□□□□□ -0.43
FN1-216ENST00000469569 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
FN1-216ENST00000469569 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
FN1-216ENST00000469569 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
FN1-216ENST00000469569 LTN1O94822 1766 aa12.38□□□□□ -0.43
FN1-216ENST00000469569 EXOC5O00471 708 aa12.38□□□□□ -0.43
FN1-216ENST00000469569 POLKQ9UBT6 870 aa12.38□□□□□ -0.43
FN1-216ENST00000469569 PCDHB8Q9UN66 801 aa12.38□□□□□ -0.43
FN1-216ENST00000469569 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
FN1-216ENST00000469569 IL2RBP14784 551 aa12.37□□□□□ -0.43
FN1-216ENST00000469569 FAM208AQ9UK61 1670 aaKnown RBP12.36□□□□□ -0.43
FN1-216ENST00000469569 THSD7AQ9UPZ6 1657 aa12.36□□□□□ -0.43
FN1-216ENST00000469569 ZNF467Q7Z7K2 595 aaPredicted RBP12.36□□□□□ -0.43
FN1-216ENST00000469569 LTV1Q96GA3 475 aaPredicted RBP12.36□□□□□ -0.43
FN1-216ENST00000469569 ANKRD26Q9UPS8 1709 aa12.35□□□□□ -0.43
FN1-216ENST00000469569 FBLN1P23142 703 aa12.35□□□□□ -0.43
FN1-216ENST00000469569 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
FN1-216ENST00000469569 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
FN1-216ENST00000469569 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
FN1-216ENST00000469569 RAPGEF4Q8WZA2 1011 aa12.35□□□□□ -0.43
FN1-216ENST00000469569 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
FN1-216ENST00000469569 EMILIN1Q9Y6C2 1016 aa12.35□□□□□ -0.43
FN1-216ENST00000469569 PLEKHG2Q9H7P9 1386 aa12.33□□□□□ -0.44
FN1-216ENST00000469569 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
FN1-216ENST00000469569 DISP2A7MBM2 1401 aa12.33□□□□□ -0.44
FN1-216ENST00000469569 PARP4Q9UKK3 1724 aaKnown RBP12.33□□□□□ -0.44
FN1-216ENST00000469569 EP400Q96L91 3159 aa12.33□□□□□ -0.44
FN1-216ENST00000469569 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
FN1-216ENST00000469569 OVOS2A0A0G2JMS6 1433 aa12.32□□□□□ -0.44
FN1-216ENST00000469569 BCL9O00512 1426 aa12.32□□□□□ -0.44
FN1-216ENST00000469569 TATP17735 454 aaPredicted RBP12.32□□□□□ -0.44
FN1-216ENST00000469569 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
FN1-216ENST00000469569 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
FN1-216ENST00000469569 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
FN1-216ENST00000469569 MAP2P11137 1827 aaKnown RBP12.32□□□□□ -0.44
FN1-216ENST00000469569 BAG6P46379 1132 aa12.31□□□□□ -0.44
FN1-216ENST00000469569 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
FN1-216ENST00000469569 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
FN1-216ENST00000469569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.441e-323■□□□□ 9.6
FN1-216ENST00000469569 BRWD3Q6RI45 1802 aa12.3□□□□□ -0.44
FN1-216ENST00000469569 TNS2Q63HR2 1409 aa12.3□□□□□ -0.44
FN1-216ENST00000469569 CFAP53Q96M91 514 aa12.3□□□□□ -0.44
FN1-216ENST00000469569 HMGB2P26583 209 aaKnown RBP12.29□□□□□ -0.44
FN1-216ENST00000469569 MTHFSP49914 203 aa12.29□□□□□ -0.44
FN1-216ENST00000469569 EIF4A2Q14240 407 aaKnown RBP12.29□□□□□ -0.44
FN1-216ENST00000469569 SPG7Q9UQ90 795 aa12.29□□□□□ -0.44
FN1-216ENST00000469569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
FN1-216ENST00000469569 MARCH10Q8NA82 808 aaPredicted RBP12.28□□□□□ -0.44
FN1-216ENST00000469569 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
FN1-216ENST00000469569 EYA1Q99502 592 aa12.28□□□□□ -0.44
FN1-216ENST00000469569 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
FN1-216ENST00000469569 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
FN1-216ENST00000469569 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
FN1-216ENST00000469569 RALBP1Q15311 655 aa12.27□□□□□ -0.45
FN1-216ENST00000469569 PEAK1Q9H792 1746 aa12.27□□□□□ -0.45
FN1-216ENST00000469569 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
FN1-216ENST00000469569 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
FN1-216ENST00000469569 TRIM37O94972 964 aa12.26□□□□□ -0.45
FN1-216ENST00000469569 DDX10Q13206 875 aaKnown RBP12.26□□□□□ -0.45
FN1-216ENST00000469569 AMOTQ4VCS5 1084 aa12.26□□□□□ -0.45
FN1-216ENST00000469569 NUDCQ9Y266 331 aa12.26□□□□□ -0.45
FN1-216ENST00000469569 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
FN1-216ENST00000469569 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
FN1-216ENST00000469569 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
FN1-216ENST00000469569 WNK3Q9BYP7 1800 aa12.25□□□□□ -0.45
FN1-216ENST00000469569 STK25O00506 426 aa12.25□□□□□ -0.45
FN1-216ENST00000469569 GALR2O43603 387 aaPredicted RBP12.25□□□□□ -0.45
FN1-216ENST00000469569 APBA3O96018 575 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms