RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 IL13P35225 146 aa18.27■□□□□ 0.52
LMNA-210ENST00000469565 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
LMNA-210ENST00000469565 PPP1R1BQ9UD71 204 aaPredicted RBP18.26■□□□□ 0.51
LMNA-210ENST00000469565 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
LMNA-210ENST00000469565 SPON1Q9HCB6 807 aa18.24■□□□□ 0.51
LMNA-210ENST00000469565 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
LMNA-210ENST00000469565 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
LMNA-210ENST00000469565 RREB1Q92766 1687 aa18.24■□□□□ 0.51
LMNA-210ENST00000469565 HMOX1P09601 288 aa18.23■□□□□ 0.51
LMNA-210ENST00000469565 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
LMNA-210ENST00000469565 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.51
LMNA-210ENST00000469565 CCDC184Q52MB2 194 aa18.23■□□□□ 0.51
LMNA-210ENST00000469565 MRS2Q9HD23 443 aa18.23■□□□□ 0.51
LMNA-210ENST00000469565 SULT6B1Q6IMI4 303 aa18.22■□□□□ 0.51
LMNA-210ENST00000469565 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
LMNA-210ENST00000469565 NUP188Q5SRE5 1749 aa18.21■□□□□ 0.51
LMNA-210ENST00000469565 KCNQ2O43526 872 aa18.21■□□□□ 0.51
LMNA-210ENST00000469565 IL2RBP14784 551 aa18.21■□□□□ 0.51
LMNA-210ENST00000469565 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
LMNA-210ENST00000469565 MIER1Q8N108 512 aa18.21■□□□□ 0.51
LMNA-210ENST00000469565 KAT6BQ8WYB5 2073 aa18.21■□□□□ 0.51
LMNA-210ENST00000469565 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
LMNA-210ENST00000469565 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
LMNA-210ENST00000469565 AEBP1Q8IUX7 1158 aa18.2■□□□□ 0.5
LMNA-210ENST00000469565 WNK3Q9BYP7 1800 aa18.2■□□□□ 0.5
LMNA-210ENST00000469565 WDR43Q15061 677 aaKnown RBP eCLIP18.19■□□□□ 0.5
LMNA-210ENST00000469565 CDCA7Q9BWT1 371 aaPredicted RBP18.18■□□□□ 0.5
LMNA-210ENST00000469565 EXOC5O00471 708 aa18.17■□□□□ 0.5
LMNA-210ENST00000469565 DDB1Q16531 1140 aa18.17■□□□□ 0.5
LMNA-210ENST00000469565 PARP4Q9UKK3 1724 aaKnown RBP18.16■□□□□ 0.5
LMNA-210ENST00000469565 MEGF6O75095 1541 aa18.15■□□□□ 0.5
LMNA-210ENST00000469565 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
LMNA-210ENST00000469565 ZCRB1Q8TBF4 217 aaKnown RBP18.14■□□□□ 0.49
LMNA-210ENST00000469565 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
LMNA-210ENST00000469565 FCHSD2O94868 740 aa18.13■□□□□ 0.49
LMNA-210ENST00000469565 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
LMNA-210ENST00000469565 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
LMNA-210ENST00000469565 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
LMNA-210ENST00000469565 NEFMP07197 916 aa18.12■□□□□ 0.49
LMNA-210ENST00000469565 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
LMNA-210ENST00000469565 FAM9BQ8IZU0 186 aa18.12■□□□□ 0.49
LMNA-210ENST00000469565 RSPH6AQ9H0K4 717 aa18.12■□□□□ 0.49
LMNA-210ENST00000469565 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
LMNA-210ENST00000469565 KDRP35968 1356 aa18.12■□□□□ 0.49
LMNA-210ENST00000469565 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
LMNA-210ENST00000469565 OVOS2A0A0G2JMS6 1433 aa18.11■□□□□ 0.49
LMNA-210ENST00000469565 LRRC37A3O60309 1634 aa18.11■□□□□ 0.49
LMNA-210ENST00000469565 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
LMNA-210ENST00000469565 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
LMNA-210ENST00000469565 PLSCR1O15162 318 aa18.09■□□□□ 0.49
LMNA-210ENST00000469565 AMOTQ4VCS5 1084 aa18.09■□□□□ 0.49
LMNA-210ENST00000469565 TNS2Q63HR2 1409 aa18.08■□□□□ 0.49
LMNA-210ENST00000469565 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
LMNA-210ENST00000469565 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
LMNA-210ENST00000469565 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
LMNA-210ENST00000469565 PCDH11XQ9BZA7 1347 aa18.07■□□□□ 0.48
LMNA-210ENST00000469565 PCDH11YQ9BZA8 1340 aa18.07■□□□□ 0.48
LMNA-210ENST00000469565 PHACTR3Q96KR7 559 aa18.07■□□□□ 0.48
LMNA-210ENST00000469565 SHANK3Q9BYB0 1731 aa18.06■□□□□ 0.48
LMNA-210ENST00000469565 MTHFSDQ2M296 383 aaKnown RBP18.06■□□□□ 0.48
LMNA-210ENST00000469565 C1orf141Q5JVX7 400 aa18.06■□□□□ 0.48
LMNA-210ENST00000469565 MARCH10Q8NA82 808 aaPredicted RBP18.06■□□□□ 0.48
LMNA-210ENST00000469565 ZNF784Q8NCA9 323 aaPredicted RBP18.06■□□□□ 0.48
LMNA-210ENST00000469565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.48
LMNA-210ENST00000469565 RGPD3A6NKT7 1758 aaPredicted RBP18.06■□□□□ 0.48
LMNA-210ENST00000469565 RGPD4Q7Z3J3 1758 aa18.06■□□□□ 0.48
LMNA-210ENST00000469565 IFNL2Q8IZJ0 200 aa18.05■□□□□ 0.48
LMNA-210ENST00000469565 CYP27B1O15528 508 aa18.04■□□□□ 0.48
LMNA-210ENST00000469565 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
LMNA-210ENST00000469565 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
LMNA-210ENST00000469565 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
LMNA-210ENST00000469565 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
LMNA-210ENST00000469565 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
LMNA-210ENST00000469565 CASZ1Q86V15 1759 aa18.03■□□□□ 0.48
LMNA-210ENST00000469565 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.48
LMNA-210ENST00000469565 DLG5Q8TDM6 1919 aa18.02■□□□□ 0.48
LMNA-210ENST00000469565 ZBTB7AO95365 584 aa18.02■□□□□ 0.48
LMNA-210ENST00000469565 PHKG2P15735 406 aa18.02■□□□□ 0.48
LMNA-210ENST00000469565 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
LMNA-210ENST00000469565 SBF2Q86WG5 1849 aa18.02■□□□□ 0.47
LMNA-210ENST00000469565 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
LMNA-210ENST00000469565 AKAP4Q5JQC9 854 aa18.01■□□□□ 0.47
LMNA-210ENST00000469565 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
LMNA-210ENST00000469565 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
LMNA-210ENST00000469565 MPRIPQ6WCQ1 1025 aa18■□□□□ 0.47
LMNA-210ENST00000469565 PDGFDQ9GZP0 370 aaPredicted RBP18■□□□□ 0.47
LMNA-210ENST00000469565 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
LMNA-210ENST00000469565 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
LMNA-210ENST00000469565 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
LMNA-210ENST00000469565 APAF1O14727 1248 aa17.99■□□□□ 0.47
LMNA-210ENST00000469565 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
LMNA-210ENST00000469565 PTGER2P43116 358 aa17.99■□□□□ 0.47
LMNA-210ENST00000469565 NFE2L2Q16236 605 aa17.99■□□□□ 0.47
LMNA-210ENST00000469565 PROM2Q8N271 834 aa17.99■□□□□ 0.47
LMNA-210ENST00000469565 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
LMNA-210ENST00000469565 RIPK4P57078 832 aa17.98■□□□□ 0.47
LMNA-210ENST00000469565 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
LMNA-210ENST00000469565 SYT17Q9BSW7 474 aa17.98■□□□□ 0.47
LMNA-210ENST00000469565 STK32BQ9NY57 414 aa17.98■□□□□ 0.47
LMNA-210ENST00000469565 TMPOP42166 694 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms