RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
SHANK2-214ENST00000468619 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
SHANK2-214ENST00000468619 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
SHANK2-214ENST00000468619 NUCB2P80303 420 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
SHANK2-214ENST00000468619 ANKRD45Q5TZF3 282 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 LRSAM1Q6UWE0 723 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 CPS1P31327 1500 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 IGSF3O75054 1194 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 GTPBP4Q9BZE4 634 aaKnown RBP16.45■□□□□ 0.22
SHANK2-214ENST00000468619 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
SHANK2-214ENST00000468619 ZNF830Q96NB3 372 aaPredicted RBP16.44■□□□□ 0.22
SHANK2-214ENST00000468619 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
SHANK2-214ENST00000468619 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
SHANK2-214ENST00000468619 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
SHANK2-214ENST00000468619 TECPR2O15040 1411 aa16.44■□□□□ 0.22
SHANK2-214ENST00000468619 KIF20AO95235 890 aa16.43■□□□□ 0.22
SHANK2-214ENST00000468619 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
SHANK2-214ENST00000468619 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
SHANK2-214ENST00000468619 CDK19Q9BWU1 502 aa16.43■□□□□ 0.22
SHANK2-214ENST00000468619 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
SHANK2-214ENST00000468619 CYP2E1P05181 493 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-214ENST00000468619 C17orf53Q8N3J3 647 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-214ENST00000468619 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
SHANK2-214ENST00000468619 AMOTL2Q9Y2J4 779 aa16.42■□□□□ 0.22
SHANK2-214ENST00000468619 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
SHANK2-214ENST00000468619 LETM1O95202 739 aaPredicted RBP16.41■□□□□ 0.22
SHANK2-214ENST00000468619 FAM135BQ49AJ0 1406 aa16.41■□□□□ 0.22
SHANK2-214ENST00000468619 IQSEC2Q5JU85 1478 aa16.4■□□□□ 0.22
SHANK2-214ENST00000468619 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
SHANK2-214ENST00000468619 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
SHANK2-214ENST00000468619 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
SHANK2-214ENST00000468619 C1orf115Q9H7X2 142 aa16.39■□□□□ 0.21
SHANK2-214ENST00000468619 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.39■□□□□ 0.21
SHANK2-214ENST00000468619 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
SHANK2-214ENST00000468619 MTHFSP49914 203 aa16.39■□□□□ 0.21
SHANK2-214ENST00000468619 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
SHANK2-214ENST00000468619 ZDHHC9Q9Y397 364 aa16.39■□□□□ 0.21
SHANK2-214ENST00000468619 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-214ENST00000468619 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHANK2-214ENST00000468619 KIF3AQ9Y496 699 aa16.38■□□□□ 0.21
SHANK2-214ENST00000468619 NCKAP5LQ9HCH0 1330 aa16.38■□□□□ 0.21
SHANK2-214ENST00000468619 NOLC1Q14978 699 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHANK2-214ENST00000468619 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
SHANK2-214ENST00000468619 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
SHANK2-214ENST00000468619 RABEP1Q15276 862 aa16.38■□□□□ 0.21
SHANK2-214ENST00000468619 SIRT1Q96EB6 747 aa16.38■□□□□ 0.21
SHANK2-214ENST00000468619 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
SHANK2-214ENST00000468619 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
SHANK2-214ENST00000468619 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
SHANK2-214ENST00000468619 TTC12Q9H892 705 aaPredicted RBP16.37■□□□□ 0.21
SHANK2-214ENST00000468619 XRN1Q8IZH2 1706 aaKnown RBP16.37■□□□□ 0.21
SHANK2-214ENST00000468619 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
SHANK2-214ENST00000468619 NAP1L2Q9ULW6 460 aaPredicted RBP16.36■□□□□ 0.21
SHANK2-214ENST00000468619 CDC45O75419 566 aa16.36■□□□□ 0.21
SHANK2-214ENST00000468619 KCNA6P17658 529 aa16.36■□□□□ 0.21
SHANK2-214ENST00000468619 TMEM51Q9NW97 253 aa16.36■□□□□ 0.21
SHANK2-214ENST00000468619 U2AF2P26368 475 aaKnown RBP eCLIP16.35■□□□□ 0.21
SHANK2-214ENST00000468619 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.213e-6■■■□□ 17.9
SHANK2-214ENST00000468619 PDCL2Q8N4E4 241 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 PIBF1Q8WXW3 757 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 NPHP4O75161 1426 aaPredicted RBP16.35■□□□□ 0.21
SHANK2-214ENST00000468619 VGLL3A8MV65 326 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 ZBTB22O15209 634 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 CABP1Q9NZU7 370 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
SHANK2-214ENST00000468619 TSPY26PQ9H489 355 aa16.34■□□□□ 0.21
SHANK2-214ENST00000468619 CGNQ9P2M7 1197 aaKnown RBP16.34■□□□□ 0.21
SHANK2-214ENST00000468619 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
SHANK2-214ENST00000468619 NUTM2FA1L443 756 aa16.34■□□□□ 0.21
SHANK2-214ENST00000468619 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
SHANK2-214ENST00000468619 HSPA2P54652 639 aa16.33■□□□□ 0.21
SHANK2-214ENST00000468619 PTCH1Q13635 1447 aa16.33■□□□□ 0.21
SHANK2-214ENST00000468619 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
SHANK2-214ENST00000468619 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.2
SHANK2-214ENST00000468619 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
SHANK2-214ENST00000468619 USP25Q9UHP3 1055 aa16.32■□□□□ 0.2
SHANK2-214ENST00000468619 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
SHANK2-214ENST00000468619 GSPT1P15170 499 aaKnown RBP16.32■□□□□ 0.2
SHANK2-214ENST00000468619 FOXD4L6Q3SYB3 417 aaPredicted RBP16.32■□□□□ 0.2
SHANK2-214ENST00000468619 FOXD4L3Q6VB84 417 aaPredicted RBP16.32■□□□□ 0.2
SHANK2-214ENST00000468619 RBM33Q96EV2 1170 aaKnown RBP16.32■□□□□ 0.2
SHANK2-214ENST00000468619 ADGRB2O60241 1585 aa16.31■□□□□ 0.2
SHANK2-214ENST00000468619 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
SHANK2-214ENST00000468619 PPIP5K1Q6PFW1 1433 aa16.31■□□□□ 0.2
SHANK2-214ENST00000468619 ZNF771Q7L3S4 317 aaPredicted RBP16.31■□□□□ 0.2
SHANK2-214ENST00000468619 GCC1Q96CN9 775 aa16.31■□□□□ 0.2
SHANK2-214ENST00000468619 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
SHANK2-214ENST00000468619 MBD3O95983 291 aa16.3■□□□□ 0.2
SHANK2-214ENST00000468619 USP26Q9BXU7 913 aa16.3■□□□□ 0.2
SHANK2-214ENST00000468619 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
SHANK2-214ENST00000468619 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
SHANK2-214ENST00000468619 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
SHANK2-214ENST00000468619 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
SHANK2-214ENST00000468619 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms