RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 NUDT12Q9BQG2 462 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 BCL2L13Q9BXK5 485 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 DNAAF2Q9NVR5 837 aaKnown RBP5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 GPSM3Q9Y4H4 160 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 RBM47A0AV96 593 aaKnown RBP5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 UNCXA6NJT0 531 aa5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 PRMT3O60678 531 aa5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 CD2BP2O95400 341 aaKnown RBP5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 OXLD1Q5BKU9 147 aa5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 CCDC24Q8N4L8 307 aa5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 ADAM32Q8TC27 787 aa5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 GPKOWQ92917 476 aaPredicted RBP eCLIP5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 EVA1BQ9NVM1 165 aa5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 GMPR2Q9P2T1 348 aaKnown RBP5.91□□□□□ -1.46
HMGB1P25-201ENST00000468402 MAGEB6P1A0A0J9YX57 407 aa5.9□□□□□ -1.46
HMGB1P25-201ENST00000468402 SCNN1AP37088 669 aa5.9□□□□□ -1.46
HMGB1P25-201ENST00000468402 AGERQ15109 404 aa5.9□□□□□ -1.46
HMGB1P25-201ENST00000468402 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
HMGB1P25-201ENST00000468402 CARD14Q9BXL6 1004 aa5.9□□□□□ -1.46
HMGB1P25-201ENST00000468402 DOLKQ9UPQ8 538 aa5.9□□□□□ -1.46
HMGB1P25-201ENST00000468402 FAM69CQ0P6D2 419 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 SWI5Q1ZZU3 235 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 TSGA10IPQ3SY00 556 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 PHTF2Q8N3S3 785 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 GIPC2Q8TF65 315 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 PRIMPOLQ96LW4 560 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 SPSB2Q99619 263 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 HINFPQ9BQA5 517 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 SLAIN2Q9P270 581 aa5.89□□□□□ -1.47
HMGB1P25-201ENST00000468402 GDF9O60383 454 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 SEC13P55735 322 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 GTF2IP78347 998 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 CLDN10P78369 228 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 LARGE2Q8N3Y3 721 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 SIRT1Q96EB6 747 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 THAP11Q96EK4 314 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 ANO2Q9NQ90 1003 aa5.88□□□□□ -1.47
HMGB1P25-201ENST00000468402 ANKRD33BA6NCL7 494 aa5.87□□□□□ -1.47
HMGB1P25-201ENST00000468402 LGR5O75473 907 aa5.87□□□□□ -1.47
HMGB1P25-201ENST00000468402 ZNF326Q5BKZ1 582 aaKnown RBP5.87□□□□□ -1.47
HMGB1P25-201ENST00000468402 CCDC102BQ68D86 513 aa5.87□□□□□ -1.47
HMGB1P25-201ENST00000468402 DNAJC14Q6Y2X3 702 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P25-201ENST00000468402 GLYCTKQ8IVS8 523 aa5.87□□□□□ -1.47
HMGB1P25-201ENST00000468402 H3BRB1 525 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 GIGYF1O75420 1035 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 DXOO77932 396 aaKnown RBP5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 ZNF16P17020 682 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 MSS51Q4VC12 460 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 FAM160A2Q8N612 972 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 TPCN2Q8NHX9 752 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 SLC16A10Q8TF71 515 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 OCSTAMPQ9BR26 566 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 BCL11AQ9H165 835 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 TUT1Q9H6E5 874 aaKnown RBP5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 PRDM9Q9NQV7 894 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 DACH1Q9UI36 760 aa5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 FCF1Q9Y324 198 aaKnown RBP5.86□□□□□ -1.47
HMGB1P25-201ENST00000468402 SFI1A8K8P3 1242 aa5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 ZNF211Q13398 564 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 CTC1Q2NKJ3 1217 aa5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 RNF20Q5VTR2 975 aa5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 EMID1Q96A84 441 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 CCDC85AQ96PX6 553 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 MKNK1Q9BUB5 465 aa5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 UNC93B1Q9H1C4 597 aa5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 ESF1Q9H501 851 aaKnown RBP5.85□□□□□ -1.47
HMGB1P25-201ENST00000468402 ZBTB7BO15156 539 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 MAPK1P28482 360 aa5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 RAB15P59190 212 aa5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 USP4Q13107 963 aa5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 PLA2G2CQ5R387 149 aa5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 SENP2Q9HC62 589 aa5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 KIAA1522Q9P206 1035 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 KIAA1024Q9UPX6 916 aa5.84□□□□□ -1.47
HMGB1P25-201ENST00000468402 MMP16P51512 607 aa5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 LINC01559Q495D7 138 aa5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 BPHLQ86WA6 291 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 SIX5Q8N196 739 aa5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 C1orf216Q8TAB5 229 aa5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 SLC10A4Q96EP9 437 aa5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 CXXC1Q9P0U4 656 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 CHIC2Q9UKJ5 165 aa5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 PCDHB11Q9Y5F2 797 aa5.83□□□□□ -1.48
HMGB1P25-201ENST00000468402 PTCRAQ6ISU1 281 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P25-201ENST00000468402 SH3BP5LQ7L8J4 393 aa5.82□□□□□ -1.48
HMGB1P25-201ENST00000468402 ZSCAN29Q8IWY8 852 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P25-201ENST00000468402 GTF3C2Q8WUA4 911 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P25-201ENST00000468402 BAP1Q92560 729 aa5.82□□□□□ -1.48
HMGB1P25-201ENST00000468402 ICMTO60725 284 aa5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 MYCP01106 439 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 RPIAP49247 311 aa5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 NBPF20Q3BBV1 942 aa5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 NOM1Q5C9Z4 860 aaKnown RBP5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 TAS1R3Q7RTX0 852 aa5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 PKD2L1Q9P0L9 805 aa5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 SEPT3Q9UH03 358 aa5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 EGFL7Q9UHF1 273 aa5.81□□□□□ -1.48
HMGB1P25-201ENST00000468402 NISCHQ9Y2I1 1504 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 TCF3P15923 654 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 FKBP4Q02790 459 aaKnown RBP eCLIP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms