RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 TRAF7Q6Q0C0 670 aa7.78□□□□□ -1.16
UBP1-207ENST00000466441 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
UBP1-207ENST00000466441 KCTD15Q96SI1 283 aaPredicted RBP7.78□□□□□ -1.16
UBP1-207ENST00000466441 RASA1P20936 1047 aa7.77□□□□□ -1.17
UBP1-207ENST00000466441 SKOR1P84550 965 aa7.77□□□□□ -1.17
UBP1-207ENST00000466441 DEPDC4Q8N2C3 294 aa7.77□□□□□ -1.17
UBP1-207ENST00000466441 PLA2G2EQ9NZK7 142 aa7.77□□□□□ -1.17
UBP1-207ENST00000466441 ZNF608Q9ULD9 1512 aaPredicted RBP7.77□□□□□ -1.17
UBP1-207ENST00000466441 SLC19A1P41440 591 aa7.76□□□□□ -1.17
UBP1-207ENST00000466441 DHX9Q08211 1270 aaKnown RBP7.76□□□□□ -1.17
UBP1-207ENST00000466441 CCDC85AQ96PX6 553 aaPredicted RBP7.76□□□□□ -1.17
UBP1-207ENST00000466441 CDK15Q96Q40 435 aa7.76□□□□□ -1.17
UBP1-207ENST00000466441 B4GALNT3Q6L9W6 998 aa7.75□□□□□ -1.17
UBP1-207ENST00000466441 LIAT1Q6ZQX7 453 aa7.75□□□□□ -1.17
UBP1-207ENST00000466441 LARGE2Q8N3Y3 721 aa7.75□□□□□ -1.17
UBP1-207ENST00000466441 ESF1Q9H501 851 aaKnown RBP7.75□□□□□ -1.17
UBP1-207ENST00000466441 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
UBP1-207ENST00000466441 PCDHB11Q9Y5F2 797 aa7.75□□□□□ -1.17
UBP1-207ENST00000466441 PBRM1Q86U86 1689 aa7.75□□□□□ -1.17
UBP1-207ENST00000466441 ABCA5Q8WWZ7 1642 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L15C9J2P7 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L10C9JJH3 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L13C9JLJ4 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L12C9JPN9 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L11C9JVI0 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L21D6R901 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L18D6R9N7 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L22D6RA61 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L17D6RBQ6 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L19D6RCP7 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L20D6RJB6 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 WNT7AO00755 349 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 BRD1O95696 1058 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 MYCP01106 439 aaPredicted RBP7.74□□□□□ -1.17
UBP1-207ENST00000466441 USP17L24Q0WX57 530 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 OXLD1Q5BKU9 147 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 FAM200AQ8TCP9 573 aa7.74□□□□□ -1.17
UBP1-207ENST00000466441 CDCA7Q9BWT1 371 aaPredicted RBP7.74□□□□□ -1.17
UBP1-207ENST00000466441 DNAAF2Q9NVR5 837 aaKnown RBP7.74□□□□□ -1.17
UBP1-207ENST00000466441 NOVA2Q9UNW9 492 aaKnown RBP7.74□□□□□ -1.17
UBP1-207ENST00000466441 TDRD9Q8NDG6 1382 aaKnown RBP7.73□□□□□ -1.17
UBP1-207ENST00000466441 EIF4G3O43432 1585 aaKnown RBP7.73□□□□□ -1.17
UBP1-207ENST00000466441 PTK7Q13308 1070 aa7.73□□□□□ -1.17
UBP1-207ENST00000466441 ARID5BQ14865 1188 aa7.73□□□□□ -1.17
UBP1-207ENST00000466441 TSGA10IPQ3SY00 556 aa7.73□□□□□ -1.17
UBP1-207ENST00000466441 OGFOD1Q8N543 542 aa7.73□□□□□ -1.17
UBP1-207ENST00000466441 AQRO60306 1485 aaKnown RBP eCLIP7.73□□□□□ -1.17
UBP1-207ENST00000466441 ABCA10Q8WWZ4 1543 aa7.73□□□□□ -1.17
UBP1-207ENST00000466441 LOC105371045A0A1W2PR82 267 aa7.72□□□□□ -1.17
UBP1-207ENST00000466441 NR5A1Q13285 461 aa7.72□□□□□ -1.17
UBP1-207ENST00000466441 CRTC2Q53ET0 693 aaPredicted RBP7.72□□□□□ -1.17
UBP1-207ENST00000466441 INTS6LQ5JSJ4 861 aaKnown RBP7.72□□□□□ -1.17
UBP1-207ENST00000466441 SPRYD7Q5W111 196 aa7.72□□□□□ -1.17
UBP1-207ENST00000466441 AEBP1Q8IUX7 1158 aa7.72□□□□□ -1.17
UBP1-207ENST00000466441 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
UBP1-207ENST00000466441 SIAH2O43255 324 aa7.71□□□□□ -1.18
UBP1-207ENST00000466441 GTF2IP78347 998 aa7.71□□□□□ -1.18
UBP1-207ENST00000466441 TRIM26Q12899 539 aaPredicted RBP7.71□□□□□ -1.18
UBP1-207ENST00000466441 IFT140Q96RY7 1462 aa7.7□□□□□ -1.18
UBP1-207ENST00000466441 A0A0G2JS52 829 aa7.7□□□□□ -1.18
UBP1-207ENST00000466441 TMEM88BA6NKF7 163 aa7.7□□□□□ -1.18
UBP1-207ENST00000466441 ADH1CP00326 375 aa7.7□□□□□ -1.18
UBP1-207ENST00000466441 RAB15P59190 212 aa7.7□□□□□ -1.18
UBP1-207ENST00000466441 KCNA1Q09470 495 aa7.7□□□□□ -1.18
UBP1-207ENST00000466441 ZNF598Q86UK7 904 aaKnown RBP7.7□□□□□ -1.18
UBP1-207ENST00000466441 SIX5Q8N196 739 aa7.7□□□□□ -1.18
UBP1-207ENST00000466441 V9GY48 417 aaPredicted RBP7.7□□□□□ -1.18
UBP1-207ENST00000466441 ERVH48-1M5A8F1 160 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 GRM5P41594 1212 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 SEC13P55735 322 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 CLDN10P78369 228 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 PSME1Q06323 249 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 SWI5Q1ZZU3 235 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 TMEM164Q5U3C3 297 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 CC2D2BQ6DHV5 1058 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 MRGPRX2Q96LB1 330 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 ZMIZ1Q9ULJ6 1067 aa7.69□□□□□ -1.18
UBP1-207ENST00000466441 ZBTB7BO15156 539 aaPredicted RBP7.68□□□□□ -1.18
UBP1-207ENST00000466441 FSHRP23945 695 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 ERVK-9P63128 1117 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 DPYDQ12882 1025 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 CCDC102BQ68D86 513 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 CCDC116Q8IYX3 515 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 EMID1Q96A84 441 aaPredicted RBP7.68□□□□□ -1.18
UBP1-207ENST00000466441 PGPEP1Q9NXJ5 209 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 PCDHGA11Q9Y5H2 935 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 GAPVD1Q14C86 1478 aa7.68□□□□□ -1.18
UBP1-207ENST00000466441 STK32AQ8WU08 396 aa7.67□□□□□ -1.18
UBP1-207ENST00000466441 CLP1Q92989 425 aaKnown RBP7.67□□□□□ -1.18
UBP1-207ENST00000466441 ZNF594Q96JF6 807 aaPredicted RBP7.67□□□□□ -1.18
UBP1-207ENST00000466441 EMILIN1Q9Y6C2 1016 aa7.67□□□□□ -1.18
UBP1-207ENST00000466441 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
UBP1-207ENST00000466441 KIF27Q86VH2 1401 aa7.67□□□□□ -1.18
UBP1-207ENST00000466441 MYT1Q01538 1121 aa7.66□□□□□ -1.18
UBP1-207ENST00000466441 TPCN2Q8NHX9 752 aa7.66□□□□□ -1.18
UBP1-207ENST00000466441 IGF1RP08069 1367 aa7.66□□□□□ -1.18
UBP1-207ENST00000466441 RAPGEF2Q9Y4G8 1499 aa7.66□□□□□ -1.18
UBP1-207ENST00000466441 M0R2N6 131 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms