RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 AGERQ15109 404 aa7.34□□□□□ -1.23
CDK13-203ENST00000465643 CEP164Q9UPV0 1460 aa7.34□□□□□ -1.23
CDK13-203ENST00000465643 PRDM2Q13029 1718 aa7.34□□□□□ -1.23
CDK13-203ENST00000465643 KIF21AQ7Z4S6 1674 aa7.34□□□□□ -1.23
CDK13-203ENST00000465643 TPCN2Q8NHX9 752 aa7.34□□□□□ -1.23
CDK13-203ENST00000465643 NKX2-3Q8TAU0 364 aa7.34□□□□□ -1.23
CDK13-203ENST00000465643 ANO2Q9NQ90 1003 aa7.34□□□□□ -1.23
CDK13-203ENST00000465643 POTEMA6NI47 508 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 OCLNQ16625 522 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 MYT1LQ9UL68 1186 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 IGSF3O75054 1194 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 CCDC102BQ68D86 513 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 TRIM50Q86XT4 487 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 SIX5Q8N196 739 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 LARGE2Q8N3Y3 721 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 SLC6A16Q9GZN6 736 aa7.33□□□□□ -1.24
CDK13-203ENST00000465643 ATP1A2P50993 1020 aa7.32□□□□□ -1.24
CDK13-203ENST00000465643 CAPN12Q6ZSI9 719 aa7.32□□□□□ -1.24
CDK13-203ENST00000465643 ZNF511Q8NB15 262 aa7.32□□□□□ -1.24
CDK13-203ENST00000465643 PCDHGA11Q9Y5H2 935 aa7.32□□□□□ -1.24
CDK13-203ENST00000465643 S1PR4O95977 384 aa7.32□□□□□ -1.24
CDK13-203ENST00000465643 RAB15P59190 212 aa7.32□□□□□ -1.24
CDK13-203ENST00000465643 ZNF211Q13398 564 aaPredicted RBP7.32□□□□□ -1.24
CDK13-203ENST00000465643 BIN2Q9UBW5 565 aaPredicted RBP7.32□□□□□ -1.24
CDK13-203ENST00000465643 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
CDK13-203ENST00000465643 ABL1P00519 1130 aa7.31□□□□□ -1.24
CDK13-203ENST00000465643 PSME1Q06323 249 aa7.31□□□□□ -1.24
CDK13-203ENST00000465643 TJAP1Q5JTD0 557 aa7.31□□□□□ -1.24
CDK13-203ENST00000465643 PURBQ96QR8 312 aaKnown RBP7.31□□□□□ -1.24
CDK13-203ENST00000465643 SEC13P55735 322 aa7.31□□□□□ -1.24
CDK13-203ENST00000465643 PCDHB11Q9Y5F2 797 aa7.31□□□□□ -1.24
CDK13-203ENST00000465643 PTPN5P54829 565 aa7.3□□□□□ -1.24
CDK13-203ENST00000465643 BPHLQ86WA6 291 aaPredicted RBP7.3□□□□□ -1.24
CDK13-203ENST00000465643 MKNK1Q9BUB5 465 aa7.3□□□□□ -1.24
CDK13-203ENST00000465643 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
CDK13-203ENST00000465643 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
CDK13-203ENST00000465643 CXXC1Q9P0U4 656 aaPredicted RBP7.3□□□□□ -1.24
CDK13-203ENST00000465643 MRC2Q9UBG0 1479 aa7.3□□□□□ -1.24
CDK13-203ENST00000465643 SLC10A4Q96EP9 437 aa7.3□□□□□ -1.24
CDK13-203ENST00000465643 SEPT3Q9UH03 358 aa7.3□□□□□ -1.24
CDK13-203ENST00000465643 MARSP56192 900 aaKnown RBP7.29□□□□□ -1.24
CDK13-203ENST00000465643 TSEN2Q8NCE0 465 aaKnown RBP7.29□□□□□ -1.24
CDK13-203ENST00000465643 HINFPQ9BQA5 517 aa7.29□□□□□ -1.24
CDK13-203ENST00000465643 RBM47A0AV96 593 aaKnown RBP7.28□□□□□ -1.24
CDK13-203ENST00000465643 PPEF1O14829 653 aaPredicted RBP7.28□□□□□ -1.24
CDK13-203ENST00000465643 STAU1O95793 577 aaKnown RBP7.28□□□□□ -1.24
CDK13-203ENST00000465643 MTMR3Q13615 1198 aa7.28□□□□□ -1.24
CDK13-203ENST00000465643 SCTRP47872 440 aa7.28□□□□□ -1.24
CDK13-203ENST00000465643 SH3BP2P78314 561 aa7.28□□□□□ -1.24
CDK13-203ENST00000465643 TAS1R3Q7RTX0 852 aa7.28□□□□□ -1.24
CDK13-203ENST00000465643 KIAA1522Q9P206 1035 aaPredicted RBP7.28□□□□□ -1.24
CDK13-203ENST00000465643 ESPNB1AK53 854 aa7.27□□□□□ -1.24
CDK13-203ENST00000465643 H3BRB1 525 aa7.27□□□□□ -1.24
CDK13-203ENST00000465643 C1orf216Q8TAB5 229 aa7.27□□□□□ -1.24
CDK13-203ENST00000465643 TUT1Q9H6E5 874 aaKnown RBP7.27□□□□□ -1.24
CDK13-203ENST00000465643 LOC105371045A0A1W2PR82 267 aa7.27□□□□□ -1.25
CDK13-203ENST00000465643 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDK13-203ENST00000465643 URB2Q14146 1524 aaKnown RBP7.27□□□□□ -1.25
CDK13-203ENST00000465643 ABCC8Q09428 1581 aa7.27□□□□□ -1.25
CDK13-203ENST00000465643 THOC2Q8NI27 1593 aaKnown RBP7.27□□□□□ -1.25
CDK13-203ENST00000465643 C1QTNF2Q9BXJ5 285 aa7.26□□□□□ -1.25
CDK13-203ENST00000465643 IL21Q9HBE4 155 aa7.26□□□□□ -1.25
CDK13-203ENST00000465643 RBM19Q9Y4C8 960 aaKnown RBP7.26□□□□□ -1.25
CDK13-203ENST00000465643 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
CDK13-203ENST00000465643 ANKRD33BA6NCL7 494 aa7.25□□□□□ -1.25
CDK13-203ENST00000465643 ZNF16P17020 682 aaPredicted RBP7.25□□□□□ -1.25
CDK13-203ENST00000465643 TAGLNQ01995 201 aaKnown RBP7.25□□□□□ -1.25
CDK13-203ENST00000465643 USP4Q13107 963 aa7.25□□□□□ -1.25
CDK13-203ENST00000465643 FKBP5Q13451 457 aaPredicted RBP7.25□□□□□ -1.25
CDK13-203ENST00000465643 RNF20Q5VTR2 975 aa7.25□□□□□ -1.25
CDK13-203ENST00000465643 GTF3C2Q8WUA4 911 aaPredicted RBP7.25□□□□□ -1.25
CDK13-203ENST00000465643 MRRFQ96E11 262 aaKnown RBP7.25□□□□□ -1.25
CDK13-203ENST00000465643 ECM1Q16610 540 aa7.25□□□□□ -1.25
CDK13-203ENST00000465643 NBPF20Q3BBV1 942 aa7.25□□□□□ -1.25
CDK13-203ENST00000465643 GIPC2Q8TF65 315 aa7.25□□□□□ -1.25
CDK13-203ENST00000465643 BCL2L13Q9BXK5 485 aa7.25□□□□□ -1.25
CDK13-203ENST00000465643 DNMT3AQ9Y6K1 912 aaPredicted RBP7.25□□□□□ -1.25
CDK13-203ENST00000465643 DNMBPQ6XZF7 1577 aa7.24□□□□□ -1.25
CDK13-203ENST00000465643 WDR62O43379 1518 aa7.24□□□□□ -1.25
CDK13-203ENST00000465643 TOPBP1Q92547 1522 aa7.24□□□□□ -1.25
CDK13-203ENST00000465643 KCTD15Q96SI1 283 aaPredicted RBP7.24□□□□□ -1.25
CDK13-203ENST00000465643 NAA30Q147X3 362 aaPredicted RBP7.24□□□□□ -1.25
CDK13-203ENST00000465643 PLA2G2CQ5R387 149 aa7.24□□□□□ -1.25
CDK13-203ENST00000465643 NPAS4Q8IUM7 802 aa7.24□□□□□ -1.25
CDK13-203ENST00000465643 CUX1P39880 1505 aa7.24□□□□□ -1.25
CDK13-203ENST00000465643 ICMTO60725 284 aa7.23□□□□□ -1.25
CDK13-203ENST00000465643 NYAP1Q6ZVC0 841 aa7.23□□□□□ -1.25
CDK13-203ENST00000465643 WEE1P30291 646 aa7.23□□□□□ -1.25
CDK13-203ENST00000465643 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
CDK13-203ENST00000465643 CUX2O14529 1486 aa7.22□□□□□ -1.25
CDK13-203ENST00000465643 ERVH48-1M5A8F1 160 aa7.22□□□□□ -1.25
CDK13-203ENST00000465643 SKOR1P84550 965 aa7.22□□□□□ -1.25
CDK13-203ENST00000465643 INTS6LQ5JSJ4 861 aaKnown RBP7.22□□□□□ -1.25
CDK13-203ENST00000465643 TRMT44Q8IYL2 757 aaKnown RBP7.22□□□□□ -1.25
CDK13-203ENST00000465643 ZNF358Q9NW07 568 aa7.22□□□□□ -1.25
CDK13-203ENST00000465643 PCDH10Q9P2E7 1040 aa7.22□□□□□ -1.25
CDK13-203ENST00000465643 TMEM229AB2RXF0 380 aa7.22□□□□□ -1.25
CDK13-203ENST00000465643 SIRT1Q96EB6 747 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms