RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 U2AF1Q01081 240 aaKnown RBP eCLIP24.75■■□□□ 1.55
SCAMP3-204ENST00000465312 ZCRB1Q8TBF4 217 aaKnown RBP24.75■■□□□ 1.55
SCAMP3-204ENST00000465312 OVOS2A0A0G2JMS6 1433 aa24.75■■□□□ 1.55
SCAMP3-204ENST00000465312 RGPD1P0DJD0 1748 aa24.75■■□□□ 1.55
SCAMP3-204ENST00000465312 NCAPD2Q15021 1401 aa24.73■■□□□ 1.55
SCAMP3-204ENST00000465312 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
SCAMP3-204ENST00000465312 MARCH10Q8NA82 808 aaPredicted RBP24.7■■□□□ 1.54
SCAMP3-204ENST00000465312 PCDH11XQ9BZA7 1347 aa24.69■■□□□ 1.54
SCAMP3-204ENST00000465312 PCDH11YQ9BZA8 1340 aa24.69■■□□□ 1.54
SCAMP3-204ENST00000465312 FAM196AQ6ZSG2 479 aa24.69■■□□□ 1.54
SCAMP3-204ENST00000465312 WDR43Q15061 677 aaKnown RBP eCLIP24.68■■□□□ 1.54
SCAMP3-204ENST00000465312 PLEKHO1Q53GL0 409 aaPredicted RBP24.68■■□□□ 1.54
SCAMP3-204ENST00000465312 DIEXFQ68CQ4 756 aaKnown RBP24.67■■□□□ 1.54
SCAMP3-204ENST00000465312 KDRP35968 1356 aa24.67■■□□□ 1.54
SCAMP3-204ENST00000465312 NEFMP07197 916 aa24.66■■□□□ 1.54
SCAMP3-204ENST00000465312 PKD1L3Q7Z443 1732 aa24.66■■□□□ 1.54
SCAMP3-204ENST00000465312 SF3B2Q13435 895 aaKnown RBP24.65■■□□□ 1.54
SCAMP3-204ENST00000465312 SHANK3Q9BYB0 1731 aa24.64■■□□□ 1.54
SCAMP3-204ENST00000465312 PRKAR2BP31323 418 aa24.64■■□□□ 1.54
SCAMP3-204ENST00000465312 AMOTQ4VCS5 1084 aa24.64■■□□□ 1.54
SCAMP3-204ENST00000465312 ZNF530Q6P9A1 599 aaPredicted RBP24.64■■□□□ 1.54
SCAMP3-204ENST00000465312 C1orf141Q5JVX7 400 aa24.63■■□□□ 1.53
SCAMP3-204ENST00000465312 ACSBG1Q96GR2 724 aa24.63■■□□□ 1.53
SCAMP3-204ENST00000465312 MRS2Q9HD23 443 aa24.63■■□□□ 1.53
SCAMP3-204ENST00000465312 KAT6BQ8WYB5 2073 aa24.62■■□□□ 1.53
SCAMP3-204ENST00000465312 TRIM37O94972 964 aa24.62■■□□□ 1.53
SCAMP3-204ENST00000465312 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.62■■□□□ 1.53
SCAMP3-204ENST00000465312 IFNL2Q8IZJ0 200 aa24.61■■□□□ 1.53
SCAMP3-204ENST00000465312 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
SCAMP3-204ENST00000465312 SOCS7O14512 581 aa24.6■■□□□ 1.53
SCAMP3-204ENST00000465312 RSPH6AQ9H0K4 717 aa24.6■■□□□ 1.53
SCAMP3-204ENST00000465312 PLEKHG2Q9H7P9 1386 aa24.59■■□□□ 1.53
SCAMP3-204ENST00000465312 CYP27B1O15528 508 aa24.59■■□□□ 1.53
SCAMP3-204ENST00000465312 FCHSD2O94868 740 aa24.59■■□□□ 1.53
SCAMP3-204ENST00000465312 UPF1Q92900 1129 aaKnown RBP eCLIP24.59■■□□□ 1.53
SCAMP3-204ENST00000465312 PNNQ9H307 717 aaKnown RBP24.59■■□□□ 1.53
SCAMP3-204ENST00000465312 MAPK8IP3Q9UPT6 1336 aa24.59■■□□□ 1.53
SCAMP3-204ENST00000465312 PHKG2P15735 406 aa24.57■■□□□ 1.52
SCAMP3-204ENST00000465312 CCDC184Q52MB2 194 aa24.57■■□□□ 1.52
SCAMP3-204ENST00000465312 DOT1LQ8TEK3 1739 aa24.57■■□□□ 1.52
SCAMP3-204ENST00000465312 EP400Q96L91 3159 aa24.57■■□□□ 1.52
SCAMP3-204ENST00000465312 MTHFSDQ2M296 383 aaKnown RBP24.55■■□□□ 1.52
SCAMP3-204ENST00000465312 GAS2L2Q8NHY3 880 aa24.55■■□□□ 1.52
SCAMP3-204ENST00000465312 SBF2Q86WG5 1849 aa24.54■■□□□ 1.52
SCAMP3-204ENST00000465312 HSP90AB1P08238 724 aaKnown RBP24.54■■□□□ 1.52
SCAMP3-204ENST00000465312 CCDC125Q86Z20 511 aa24.54■■□□□ 1.52
SCAMP3-204ENST00000465312 APBA3O96018 575 aa24.53■■□□□ 1.52
SCAMP3-204ENST00000465312 CCDC146Q8IYE0 955 aa24.53■■□□□ 1.52
SCAMP3-204ENST00000465312 KCNQ2O43526 872 aa24.52■■□□□ 1.52
SCAMP3-204ENST00000465312 BAG6P46379 1132 aa24.52■■□□□ 1.52
SCAMP3-204ENST00000465312 PRIM1P49642 420 aaKnown RBP24.52■■□□□ 1.52
SCAMP3-204ENST00000465312 AKAP4Q5JQC9 854 aa24.52■■□□□ 1.52
SCAMP3-204ENST00000465312 PHACTR3Q96KR7 559 aa24.52■■□□□ 1.52
SCAMP3-204ENST00000465312 NHSQ6T4R5 1651 aa24.52■■□□□ 1.52
SCAMP3-204ENST00000465312 BCL9O00512 1426 aa24.52■■□□□ 1.52
SCAMP3-204ENST00000465312 MPRIPQ6WCQ1 1025 aa24.51■■□□□ 1.51
SCAMP3-204ENST00000465312 BCL11BQ9C0K0 894 aaPredicted RBP24.51■■□□□ 1.51
SCAMP3-204ENST00000465312 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
SCAMP3-204ENST00000465312 TNS1Q9HBL0 1735 aaKnown RBP24.49■■□□□ 1.51
SCAMP3-204ENST00000465312 DCAF5Q96JK2 942 aa24.49■■□□□ 1.51
SCAMP3-204ENST00000465312 PTF1AQ7RTS3 328 aa24.48■■□□□ 1.51
SCAMP3-204ENST00000465312 MAP3K5Q99683 1374 aa24.48■■□□□ 1.51
SCAMP3-204ENST00000465312 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
SCAMP3-204ENST00000465312 NKX1-1Q15270 411 aaPredicted RBP24.47■■□□□ 1.51
SCAMP3-204ENST00000465312 DEFB132Q7Z7B7 95 aa24.47■■□□□ 1.51
SCAMP3-204ENST00000465312 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
SCAMP3-204ENST00000465312 RTF1Q92541 710 aaKnown RBP24.47■■□□□ 1.51
SCAMP3-204ENST00000465312 TMOD3Q9NYL9 352 aa24.47■■□□□ 1.51
SCAMP3-204ENST00000465312 TOGARAM1Q9Y4F4 1720 aa24.47■■□□□ 1.51
SCAMP3-204ENST00000465312 CABP4P57796 275 aa24.45■■□□□ 1.5
SCAMP3-204ENST00000465312 RUNDC1Q96C34 613 aa24.45■■□□□ 1.5
SCAMP3-204ENST00000465312 PLEKHF1Q96S99 279 aa24.45■■□□□ 1.5
SCAMP3-204ENST00000465312 BTAF1O14981 1849 aa24.45■■□□□ 1.5
SCAMP3-204ENST00000465312 KDM6AO15550 1401 aaPredicted RBP24.44■■□□□ 1.5
SCAMP3-204ENST00000465312 EN1Q05925 392 aaPredicted RBP24.44■■□□□ 1.5
SCAMP3-204ENST00000465312 ITGB4P16144 1822 aa24.43■■□□□ 1.5
SCAMP3-204ENST00000465312 NEUROD2Q15784 382 aa24.43■■□□□ 1.5
SCAMP3-204ENST00000465312 MIER1Q8N108 512 aa24.43■■□□□ 1.5
SCAMP3-204ENST00000465312 RNMTO43148 476 aaKnown RBP24.42■■□□□ 1.5
SCAMP3-204ENST00000465312 NFE2L2Q16236 605 aa24.42■■□□□ 1.5
SCAMP3-204ENST00000465312 PNISRQ8TF01 805 aaKnown RBP24.42■■□□□ 1.5
SCAMP3-204ENST00000465312 VIRMAQ69YN4 1812 aaKnown RBP24.42■■□□□ 1.5
SCAMP3-204ENST00000465312 SCN11AQ9UI33 1791 aa24.42■■□□□ 1.5
SCAMP3-204ENST00000465312 ERVV-2B6SEH9 535 aa24.41■■□□□ 1.5
SCAMP3-204ENST00000465312 LGR6Q9HBX8 967 aa24.41■■□□□ 1.5
SCAMP3-204ENST00000465312 RRP7AQ9Y3A4 280 aaKnown RBP24.41■■□□□ 1.5
SCAMP3-204ENST00000465312 CCER2I3L3R5 266 aa24.4■■□□□ 1.5
SCAMP3-204ENST00000465312 TEFQ10587 303 aa24.4■■□□□ 1.5
SCAMP3-204ENST00000465312 EZH2Q15910 746 aaKnown RBP24.39■■□□□ 1.49
SCAMP3-204ENST00000465312 PIGBQ92521 554 aa24.39■■□□□ 1.49
SCAMP3-204ENST00000465312 DLG5Q8TDM6 1919 aa24.38■■□□□ 1.49
SCAMP3-204ENST00000465312 RIPK4P57078 832 aa24.38■■□□□ 1.49
SCAMP3-204ENST00000465312 MCM10Q7L590 875 aa24.38■■□□□ 1.49
SCAMP3-204ENST00000465312 DCTN1Q14203 1278 aa24.37■■□□□ 1.49
SCAMP3-204ENST00000465312 NFATC2IPQ8NCF5 419 aa24.37■■□□□ 1.49
SCAMP3-204ENST00000465312 SENP3-EIF4A1A0A087X0R7 540 aa24.36■■□□□ 1.49
SCAMP3-204ENST00000465312 TMPOP42166 694 aaKnown RBP24.36■■□□□ 1.49
SCAMP3-204ENST00000465312 SLC52A2Q9HAB3 445 aa24.36■■□□□ 1.49
SCAMP3-204ENST00000465312 APAF1O14727 1248 aa24.35■■□□□ 1.49
SCAMP3-204ENST00000465312 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms