RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 MAP7D1Q3KQU3 841 aa9.21□□□□□ -0.94
CACNA1C-223ENST00000465278 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-223ENST00000465278 MPNDQ8N594 471 aa9.21□□□□□ -0.94
CACNA1C-223ENST00000465278 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
CACNA1C-223ENST00000465278 CHIC2Q9UKJ5 165 aa9.21□□□□□ -0.94
CACNA1C-223ENST00000465278 ADH1CP00326 375 aa9.2□□□□□ -0.94
CACNA1C-223ENST00000465278 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
CACNA1C-223ENST00000465278 SNIP1Q8TAD8 396 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-223ENST00000465278 PBXIP1Q96AQ6 731 aa9.2□□□□□ -0.94
CACNA1C-223ENST00000465278 NR3C2P08235 984 aa9.19□□□□□ -0.94
CACNA1C-223ENST00000465278 TRIM67Q6ZTA4 783 aa9.19□□□□□ -0.94
CACNA1C-223ENST00000465278 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
CACNA1C-223ENST00000465278 SEPT12Q8IYM1 358 aa9.19□□□□□ -0.94
CACNA1C-223ENST00000465278 WASF2Q9Y6W5 498 aa9.19□□□□□ -0.94
CACNA1C-223ENST00000465278 PPP1R15AO75807 674 aaPredicted RBP9.18□□□□□ -0.94
CACNA1C-223ENST00000465278 NR5A1Q13285 461 aa9.18□□□□□ -0.94
CACNA1C-223ENST00000465278 URB2Q14146 1524 aaKnown RBP9.18□□□□□ -0.94
CACNA1C-223ENST00000465278 GAPVD1Q14C86 1478 aa9.18□□□□□ -0.94
CACNA1C-223ENST00000465278 EML3Q32P44 896 aa9.18□□□□□ -0.94
CACNA1C-223ENST00000465278 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
CACNA1C-223ENST00000465278 CADPSQ9ULU8 1353 aa9.18□□□□□ -0.94
CACNA1C-223ENST00000465278 TSPOAP1O95153 1857 aa9.17□□□□□ -0.94
CACNA1C-223ENST00000465278 SCTRP47872 440 aa9.17□□□□□ -0.94
CACNA1C-223ENST00000465278 USP4Q13107 963 aa9.17□□□□□ -0.94
CACNA1C-223ENST00000465278 PPP1R26Q5T8A7 1209 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-223ENST00000465278 NOD1Q9Y239 953 aa9.17□□□□□ -0.94
CACNA1C-223ENST00000465278 LZTS3O60299 673 aaPredicted RBP9.16□□□□□ -0.94
CACNA1C-223ENST00000465278 RASA1P20936 1047 aa9.16□□□□□ -0.94
CACNA1C-223ENST00000465278 NNTQ13423 1086 aa9.16□□□□□ -0.94
CACNA1C-223ENST00000465278 CCDC116Q8IYX3 515 aa9.16□□□□□ -0.94
CACNA1C-223ENST00000465278 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-223ENST00000465278 CYLDQ9NQC7 956 aa9.16□□□□□ -0.94
CACNA1C-223ENST00000465278 TOR4AQ9NXH8 423 aa9.16□□□□□ -0.94
CACNA1C-223ENST00000465278 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 SMPD1P17405 629 aa9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 LARP1Q6PKG0 1096 aaKnown RBP9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 FANCD2Q9BXW9 1451 aa9.14□□□□□ -0.95
CACNA1C-223ENST00000465278 SYNJ1O43426 1573 aa9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 DIP2BQ9P265 1576 aa9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 ATP5J2-PTCD1G3V325 749 aa9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 ADD1P35611 737 aaKnown RBP9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 CLDN10P78369 228 aa9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 CRTC2Q53ET0 693 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 CCDC125Q86Z20 511 aa9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 TOP2BQ02880 1626 aa9.13□□□□□ -0.95
CACNA1C-223ENST00000465278 GTF2IP78347 998 aa9.12□□□□□ -0.95
CACNA1C-223ENST00000465278 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
CACNA1C-223ENST00000465278 HPS1Q92902 700 aa9.12□□□□□ -0.95
CACNA1C-223ENST00000465278 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
CACNA1C-223ENST00000465278 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-223ENST00000465278 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
CACNA1C-223ENST00000465278 LILRA1O75019 489 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 ATG7O95352 703 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 PRR20EP86478 221 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 PRR20CP86479 221 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 PRR20DP86480 221 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 PRR20BP86481 221 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 PRR20AP86496 221 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 MYT1Q01538 1121 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 TRIM50Q86XT4 487 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 ITPKCQ96DU7 683 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 EMILIN1Q9Y6C2 1016 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 PEG3Q9GZU2 1588 aa9.11□□□□□ -0.95
CACNA1C-223ENST00000465278 ZCCHC6Q5VYS8 1495 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 RGS20O76081 388 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 ZIC2O95409 532 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 STAU1O95793 577 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 ERVK-9P63128 1117 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 PSME1Q06323 249 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 CBLBQ13191 982 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 PTK7Q13308 1070 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 OSBPL3Q9H4L5 887 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 ZFAND3Q9H8U3 227 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 NOVA2Q9UNW9 492 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 KIAA1024Q9UPX6 916 aa9.1□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L15C9J2P7 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L10C9JJH3 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L13C9JLJ4 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L12C9JPN9 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L21D6R901 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L18D6R9N7 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L22D6RA61 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L17D6RBQ6 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L19D6RCP7 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L20D6RJB6 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 USP17L24Q0WX57 530 aa9.09□□□□□ -0.95
CACNA1C-223ENST00000465278 KLF16Q9BXK1 252 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms