RNA–Protein interactions for RNA: ENST00000465271.5

CNIH4-205, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNIH4, Length 4,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-205ENST00000465271 CCDC146Q8IYE0 955 aa11.81□□□□□ -0.52
CNIH4-205ENST00000465271 FANCIQ9NVI1 1328 aa11.81□□□□□ -0.52
CNIH4-205ENST00000465271 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
CNIH4-205ENST00000465271 UBR3Q6ZT12 1888 aa11.81□□□□□ -0.52
CNIH4-205ENST00000465271 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
CNIH4-205ENST00000465271 ATRNO75882 1429 aa11.8□□□□□ -0.52
CNIH4-205ENST00000465271 CHL1O00533 1208 aa11.8□□□□□ -0.52
CNIH4-205ENST00000465271 LRP5O75197 1615 aa11.8□□□□□ -0.52
CNIH4-205ENST00000465271 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
CNIH4-205ENST00000465271 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
CNIH4-205ENST00000465271 POLR3GLQ9BT43 218 aa11.79□□□□□ -0.52
CNIH4-205ENST00000465271 NUP98P52948 1817 aa11.79□□□□□ -0.52
CNIH4-205ENST00000465271 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
CNIH4-205ENST00000465271 ARAP2Q8WZ64 1704 aa11.78□□□□□ -0.52
CNIH4-205ENST00000465271 KDM2BQ8NHM5 1336 aa11.78□□□□□ -0.52
CNIH4-205ENST00000465271 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
CNIH4-205ENST00000465271 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
CNIH4-205ENST00000465271 MAP3K5Q99683 1374 aa11.77□□□□□ -0.52
CNIH4-205ENST00000465271 PRKAR2BP31323 418 aa11.77□□□□□ -0.52
CNIH4-205ENST00000465271 IL17REQ8NFR9 667 aa11.77□□□□□ -0.52
CNIH4-205ENST00000465271 FAM83GA6ND36 823 aa11.77□□□□□ -0.53
CNIH4-205ENST00000465271 NLRP6P59044 892 aa11.77□□□□□ -0.53
CNIH4-205ENST00000465271 NGDNQ8NEJ9 315 aaKnown RBP11.77□□□□□ -0.53
CNIH4-205ENST00000465271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
CNIH4-205ENST00000465271 BABAM1Q9NWV8 329 aa11.76□□□□□ -0.53
CNIH4-205ENST00000465271 E9PSI1 815 aa11.75□□□□□ -0.53
CNIH4-205ENST00000465271 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
CNIH4-205ENST00000465271 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
CNIH4-205ENST00000465271 ATF3P18847 181 aa11.75□□□□□ -0.53
CNIH4-205ENST00000465271 RARSP54136 660 aaKnown RBP11.75□□□□□ -0.53
CNIH4-205ENST00000465271 COL4A1P02462 1669 aa11.74□□□□□ -0.53
CNIH4-205ENST00000465271 XPCQ01831 940 aaPredicted RBP11.74□□□□□ -0.53
CNIH4-205ENST00000465271 ATP10DQ9P241 1426 aa11.74□□□□□ -0.53
CNIH4-205ENST00000465271 KIAA1551Q9HCM1 1747 aa11.74□□□□□ -0.53
CNIH4-205ENST00000465271 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
CNIH4-205ENST00000465271 PSME1Q06323 249 aa11.74□□□□□ -0.53
CNIH4-205ENST00000465271 ERICH6BQ5W0A0 696 aa11.74□□□□□ -0.53
CNIH4-205ENST00000465271 MYH3P11055 1940 aa11.73□□□□□ -0.53
CNIH4-205ENST00000465271 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
CNIH4-205ENST00000465271 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
CNIH4-205ENST00000465271 YTHDC1Q96MU7 727 aaKnown RBP11.73□□□□□ -0.53
CNIH4-205ENST00000465271 RRP1P56182 461 aaKnown RBP11.73□□□□□ -0.53
CNIH4-205ENST00000465271 VAMP4O75379 141 aa11.73□□□□□ -0.53
CNIH4-205ENST00000465271 LTBP1Q14766 1721 aa11.73□□□□□ -0.53
CNIH4-205ENST00000465271 C20orf194Q5TEA3 1177 aa11.72□□□□□ -0.53
CNIH4-205ENST00000465271 LRRC59Q96AG4 307 aaKnown RBP11.72□□□□□ -0.53
CNIH4-205ENST00000465271 BCANQ96GW7 911 aa11.72□□□□□ -0.53
CNIH4-205ENST00000465271 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
CNIH4-205ENST00000465271 ABCC4O15439 1325 aa11.72□□□□□ -0.53
CNIH4-205ENST00000465271 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.53
CNIH4-205ENST00000465271 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
CNIH4-205ENST00000465271 SULT6B1Q6IMI4 303 aa11.71□□□□□ -0.53
CNIH4-205ENST00000465271 ANKRD24Q8TF21 1146 aa11.71□□□□□ -0.54
CNIH4-205ENST00000465271 CFAP53Q96M91 514 aa11.71□□□□□ -0.54
CNIH4-205ENST00000465271 CYP27B1O15528 508 aa11.7□□□□□ -0.54
CNIH4-205ENST00000465271 HMOX1P09601 288 aa11.7□□□□□ -0.54
CNIH4-205ENST00000465271 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
CNIH4-205ENST00000465271 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
CNIH4-205ENST00000465271 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
CNIH4-205ENST00000465271 CARD10Q9BWT7 1032 aa11.7□□□□□ -0.54
CNIH4-205ENST00000465271 LRRC37AA6NMS7 1700 aa11.69□□□□□ -0.54
CNIH4-205ENST00000465271 U2AF1L5P0DN76 240 aaPredicted RBP11.69□□□□□ -0.54
CNIH4-205ENST00000465271 U2AF1Q01081 240 aaKnown RBP eCLIP11.69□□□□□ -0.54
CNIH4-205ENST00000465271 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
CNIH4-205ENST00000465271 RLBP1P12271 317 aa11.68□□□□□ -0.54
CNIH4-205ENST00000465271 WDR43Q15061 677 aaKnown RBP eCLIP11.68□□□□□ -0.54
CNIH4-205ENST00000465271 PDIA6Q15084 440 aa11.68□□□□□ -0.54
CNIH4-205ENST00000465271 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
CNIH4-205ENST00000465271 SPATA31A1Q5TZJ5 1347 aa11.68□□□□□ -0.54
CNIH4-205ENST00000465271 KIF13BQ9NQT8 1826 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 ALDH1L2Q3SY69 923 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 C8orf58Q8NAV2 365 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 TNNQ9UQP3 1299 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
CNIH4-205ENST00000465271 SPATA31A5Q5VU36 1347 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 SPATA31A7Q8IWB4 1347 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
CNIH4-205ENST00000465271 RIPK4P57078 832 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 CERKQ8TCT0 537 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 PHKG2P15735 406 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 JCADQ9P266 1359 aa11.67□□□□□ -0.54
CNIH4-205ENST00000465271 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
CNIH4-205ENST00000465271 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
CNIH4-205ENST00000465271 BCAR3O75815 825 aa11.66□□□□□ -0.54
CNIH4-205ENST00000465271 THUMPD2Q9BTF0 503 aaKnown RBP11.66□□□□□ -0.54
CNIH4-205ENST00000465271 LGR6Q9HBX8 967 aa11.65□□□□□ -0.54
CNIH4-205ENST00000465271 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.55
CNIH4-205ENST00000465271 BARGINQ6ZT62 677 aa11.64□□□□□ -0.55
CNIH4-205ENST00000465271 COL15A1P39059 1388 aa11.64□□□□□ -0.55
CNIH4-205ENST00000465271 DCTN1Q14203 1278 aa11.64□□□□□ -0.55
CNIH4-205ENST00000465271 ZNF428Q96B54 188 aa11.64□□□□□ -0.55
CNIH4-205ENST00000465271 USHBP1Q8N6Y0 703 aa11.63□□□□□ -0.55
CNIH4-205ENST00000465271 SPATA31A6Q5VVP1 1343 aa11.63□□□□□ -0.55
CNIH4-205ENST00000465271 RNMTO43148 476 aaKnown RBP11.63□□□□□ -0.55
CNIH4-205ENST00000465271 ARHGAP45Q92619 1136 aa11.63□□□□□ -0.55
CNIH4-205ENST00000465271 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
CNIH4-205ENST00000465271 DOCK2Q92608 1830 aa11.62□□□□□ -0.55
CNIH4-205ENST00000465271 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms