RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 KDM4AO75164 1064 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 KCNA6P17658 529 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 HRCP23327 699 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 GJA5P36382 358 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 SLC26A8Q96RN1 970 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 IQGAP3Q86VI3 1631 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 ALKQ9UM73 1620 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 TMEM94Q12767 1356 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 NWD1Q149M9 1564 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 RIMS2Q9UQ26 1411 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 TK2O00142 265 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 NDUFV2P19404 249 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 ITGAEP38570 1179 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 PPP2R2DQ66LE6 453 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 E9PCH4 1651 aa8.75□□□□□ -1.01
SSBP1-204ENST00000465167 PLEKHG1Q9ULL1 1385 aa8.74□□□□□ -1.01
SSBP1-204ENST00000465167 DIP2AQ14689 1571 aa8.74□□□□□ -1.01
SSBP1-204ENST00000465167 TMEM131LA2VDJ0 1609 aa8.74□□□□□ -1.01
SSBP1-204ENST00000465167 RFC5P40937 340 aa8.74□□□□□ -1.01
SSBP1-204ENST00000465167 MCM6Q14566 821 aa8.74□□□□□ -1.01
SSBP1-204ENST00000465167 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
SSBP1-204ENST00000465167 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
SSBP1-204ENST00000465167 ROBO1Q9Y6N7 1651 aa8.74□□□□□ -1.01
SSBP1-204ENST00000465167 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
SSBP1-204ENST00000465167 USP46P62068 366 aa8.73□□□□□ -1.01
SSBP1-204ENST00000465167 SAMD7Q7Z3H4 446 aa8.73□□□□□ -1.01
SSBP1-204ENST00000465167 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
SSBP1-204ENST00000465167 PCDHB15Q9Y5E8 787 aa8.73□□□□□ -1.01
SSBP1-204ENST00000465167 NUP155O75694 1391 aa8.73□□□□□ -1.01
SSBP1-204ENST00000465167 FAM135BQ49AJ0 1406 aa8.72□□□□□ -1.01
SSBP1-204ENST00000465167 PHLPP1O60346 1717 aa8.72□□□□□ -1.01
SSBP1-204ENST00000465167 HOXA2O43364 376 aa8.72□□□□□ -1.01
SSBP1-204ENST00000465167 LILRB3O75022 631 aa8.72□□□□□ -1.01
SSBP1-204ENST00000465167 ZFYVE9O95405 1425 aa8.71□□□□□ -1.01
SSBP1-204ENST00000465167 SPHKAPQ2M3C7 1700 aa8.71□□□□□ -1.01
SSBP1-204ENST00000465167 TRPM2O94759 1503 aa8.71□□□□□ -1.01
SSBP1-204ENST00000465167 SLC4A3P48751 1232 aa8.71□□□□□ -1.02
SSBP1-204ENST00000465167 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.02
SSBP1-204ENST00000465167 BANK1Q8NDB2 785 aa8.71□□□□□ -1.02
SSBP1-204ENST00000465167 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
SSBP1-204ENST00000465167 QPCTQ16769 361 aa8.7□□□□□ -1.02
SSBP1-204ENST00000465167 CSPP1Q1MSJ5 1256 aa8.7□□□□□ -1.02
SSBP1-204ENST00000465167 ZNF326Q5BKZ1 582 aaKnown RBP8.7□□□□□ -1.02
SSBP1-204ENST00000465167 ADGRD1Q6QNK2 874 aa8.7□□□□□ -1.02
SSBP1-204ENST00000465167 ZFRQ96KR1 1074 aaKnown RBP8.7□□□□□ -1.02
SSBP1-204ENST00000465167 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
SSBP1-204ENST00000465167 A6NJR5 290 aa8.69□□□□□ -1.02
SSBP1-204ENST00000465167 ATF3P18847 181 aa8.69□□□□□ -1.02
SSBP1-204ENST00000465167 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
SSBP1-204ENST00000465167 MRPL50Q8N5N7 158 aaKnown RBP8.69□□□□□ -1.02
SSBP1-204ENST00000465167 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
SSBP1-204ENST00000465167 PIK3R4Q99570 1358 aa8.69□□□□□ -1.02
SSBP1-204ENST00000465167 NCOA3Q9Y6Q9 1424 aa8.69□□□□□ -1.02
SSBP1-204ENST00000465167 KIF1BO60333 1816 aa8.68□□□□□ -1.02
SSBP1-204ENST00000465167 HRO43593 1189 aa8.68□□□□□ -1.02
SSBP1-204ENST00000465167 FDX1P10109 184 aa8.68□□□□□ -1.02
SSBP1-204ENST00000465167 NUTM2DQ5VT03 806 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-204ENST00000465167 PPARGC1BQ86YN6 1023 aaKnown RBP8.68□□□□□ -1.02
SSBP1-204ENST00000465167 CLUAP1Q96AJ1 413 aa8.68□□□□□ -1.02
SSBP1-204ENST00000465167 SNRKQ9NRH2 765 aa8.68□□□□□ -1.02
SSBP1-204ENST00000465167 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
SSBP1-204ENST00000465167 CFHP08603 1231 aa8.67□□□□□ -1.02
SSBP1-204ENST00000465167 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
SSBP1-204ENST00000465167 MEX3CQ5U5Q3 659 aaKnown RBP8.67□□□□□ -1.02
SSBP1-204ENST00000465167 CABLES1Q8TDN4 633 aa8.67□□□□□ -1.02
SSBP1-204ENST00000465167 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
SSBP1-204ENST00000465167 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-204ENST00000465167 JCADQ9P266 1359 aa8.66□□□□□ -1.02
SSBP1-204ENST00000465167 GUCA2AQ02747 115 aa8.66□□□□□ -1.02
SSBP1-204ENST00000465167 HLA-CQ95604 372 aa8.66□□□□□ -1.02
SSBP1-204ENST00000465167 ZBTB3Q9H5J0 574 aa8.66□□□□□ -1.02
SSBP1-204ENST00000465167 NUTM2BA6NNL0 878 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-204ENST00000465167 NUTM2EB1AL46 878 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-204ENST00000465167 RNF40O75150 1001 aa8.65□□□□□ -1.02
SSBP1-204ENST00000465167 FUT2Q10981 343 aa8.65□□□□□ -1.02
SSBP1-204ENST00000465167 GRIPAP1Q4V328 841 aa8.65□□□□□ -1.02
SSBP1-204ENST00000465167 NUTM2AQ8IVF1 878 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-204ENST00000465167 TRIM52Q96A61 297 aa8.65□□□□□ -1.02
SSBP1-204ENST00000465167 C19orf44Q9H6X5 657 aa8.65□□□□□ -1.02
SSBP1-204ENST00000465167 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.03
SSBP1-204ENST00000465167 ADAMTS13Q76LX8 1427 aa8.64□□□□□ -1.03
SSBP1-204ENST00000465167 ANKRD13DQ6ZTN6 518 aa8.64□□□□□ -1.03
SSBP1-204ENST00000465167 POM121Q96HA1 1249 aa8.64□□□□□ -1.03
SSBP1-204ENST00000465167 LRCH3Q96II8 777 aa8.64□□□□□ -1.03
SSBP1-204ENST00000465167 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
SSBP1-204ENST00000465167 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
SSBP1-204ENST00000465167 DCCP43146 1447 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 SETD1AO15047 1707 aaKnown RBP8.63□□□□□ -1.03
SSBP1-204ENST00000465167 SPATA31A6Q5VVP1 1343 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 CLTCL1P53675 1640 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 COL16A1Q07092 1604 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-204ENST00000465167 TRAK2O60296 914 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 AP1G2O75843 785 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 KMT5BQ4FZB7 885 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 ARXQ96QS3 562 aa8.63□□□□□ -1.03
SSBP1-204ENST00000465167 XRN1Q8IZH2 1706 aaKnown RBP8.63□□□□□ -1.03
SSBP1-204ENST00000465167 RRBP1Q9P2E9 1410 aaKnown RBP8.63□□□□□ -1.03
SSBP1-204ENST00000465167 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms