RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CEP85Q6P2H3 762 aa15.44■□□□□ 0.06
CLCNKA-204ENST00000464764 ZNF500O60304 480 aaPredicted RBP15.43■□□□□ 0.06
CLCNKA-204ENST00000464764 NEK4P51957 841 aa15.43■□□□□ 0.06
CLCNKA-204ENST00000464764 ANKRD44Q8N8A2 993 aa15.43■□□□□ 0.06
CLCNKA-204ENST00000464764 ZKSCAN5Q9Y2L8 839 aa15.43■□□□□ 0.06
CLCNKA-204ENST00000464764 LRSAM1Q6UWE0 723 aa15.43■□□□□ 0.06
CLCNKA-204ENST00000464764 GDPD2Q9HCC8 539 aa15.43■□□□□ 0.06
CLCNKA-204ENST00000464764 CWC22Q9HCG8 908 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-204ENST00000464764 YTHDC2Q9H6S0 1430 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-204ENST00000464764 NCKAP5LQ9HCH0 1330 aa15.42■□□□□ 0.06
CLCNKA-204ENST00000464764 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
CLCNKA-204ENST00000464764 KNDC1Q76NI1 1749 aa15.42■□□□□ 0.06
CLCNKA-204ENST00000464764 ASXL2Q76L83 1435 aa15.41■□□□□ 0.06
CLCNKA-204ENST00000464764 HS1BP3Q53T59 392 aa15.41■□□□□ 0.06
CLCNKA-204ENST00000464764 TMX3Q96JJ7 454 aa15.41■□□□□ 0.06
CLCNKA-204ENST00000464764 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 MIS18AQ9NYP9 233 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 ARHGAP31Q2M1Z3 1444 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 PTPRMP28827 1452 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 FRMPD1Q5SYB0 1578 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 MCM10Q7L590 875 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 TSC1Q92574 1164 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 ZNF830Q96NB3 372 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
CLCNKA-204ENST00000464764 ATP10DQ9P241 1426 aa15.39■□□□□ 0.05
CLCNKA-204ENST00000464764 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
CLCNKA-204ENST00000464764 ABCC3O15438 1527 aa15.39■□□□□ 0.05
CLCNKA-204ENST00000464764 ERC2O15083 957 aa15.39■□□□□ 0.05
CLCNKA-204ENST00000464764 FBXO31Q5XUX0 539 aaPredicted RBP15.39■□□□□ 0.05
CLCNKA-204ENST00000464764 SIGLEC1Q9BZZ2 1709 aa15.38■□□□□ 0.05
CLCNKA-204ENST00000464764 F6X3S4 739 aa15.38■□□□□ 0.05
CLCNKA-204ENST00000464764 GADD45BO75293 160 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-204ENST00000464764 MSH6P52701 1360 aa15.38■□□□□ 0.05
CLCNKA-204ENST00000464764 REC8O95072 547 aa15.38■□□□□ 0.05
CLCNKA-204ENST00000464764 SLC4A10Q6U841 1118 aa15.38■□□□□ 0.05
CLCNKA-204ENST00000464764 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
CLCNKA-204ENST00000464764 DTNBO60941 627 aa15.37■□□□□ 0.05
CLCNKA-204ENST00000464764 PTMAP06454 111 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-204ENST00000464764 TERF1P54274 439 aa15.37■□□□□ 0.05
CLCNKA-204ENST00000464764 EXOC6BQ9Y2D4 811 aa15.37■□□□□ 0.05
CLCNKA-204ENST00000464764 RTL1A6NKG5 1358 aa15.37■□□□□ 0.05
CLCNKA-204ENST00000464764 ZFYVE9O95405 1425 aa15.37■□□□□ 0.05
CLCNKA-204ENST00000464764 UPF3BQ9BZI7 483 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-204ENST00000464764 PDE1AP54750 535 aa15.36■□□□□ 0.05
CLCNKA-204ENST00000464764 C17orf53Q8N3J3 647 aaPredicted RBP15.36■□□□□ 0.05
CLCNKA-204ENST00000464764 POGZQ7Z3K3 1410 aa15.36■□□□□ 0.05
CLCNKA-204ENST00000464764 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
CLCNKA-204ENST00000464764 G2E3Q7L622 706 aa15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 PRDM10Q9NQV6 1147 aa15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 FAM177BA6PVY3 158 aa15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 BRD1O95696 1058 aa15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLCNKA-204ENST00000464764 RGS12O14924 1447 aa15.34■□□□□ 0.05
CLCNKA-204ENST00000464764 SULT6B1Q6IMI4 303 aa15.34■□□□□ 0.05
CLCNKA-204ENST00000464764 PRDM4Q9UKN5 801 aa15.34■□□□□ 0.05
CLCNKA-204ENST00000464764 RILPL2Q969X0 211 aa15.33■□□□□ 0.05
CLCNKA-204ENST00000464764 LARP6Q9BRS8 491 aaKnown RBP15.33■□□□□ 0.05
CLCNKA-204ENST00000464764 TSPY26PQ9H489 355 aa15.33■□□□□ 0.05
CLCNKA-204ENST00000464764 LMOD3Q0VAK6 560 aa15.33■□□□□ 0.04
CLCNKA-204ENST00000464764 ANO2Q9NQ90 1003 aa15.33■□□□□ 0.04
CLCNKA-204ENST00000464764 ARHGEF40Q8TER5 1519 aa15.33■□□□□ 0.04
CLCNKA-204ENST00000464764 DNTTIP2Q5QJE6 756 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-204ENST00000464764 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
CLCNKA-204ENST00000464764 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
CLCNKA-204ENST00000464764 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
CLCNKA-204ENST00000464764 SASS6Q6UVJ0 657 aa15.32■□□□□ 0.04
CLCNKA-204ENST00000464764 USP48Q86UV5 1035 aa15.32■□□□□ 0.04
CLCNKA-204ENST00000464764 HECW2Q9P2P5 1572 aa15.32■□□□□ 0.04
CLCNKA-204ENST00000464764 TRIM6-TRIM34B2RNG4 842 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 SOX12O15370 315 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 MBD3O95983 291 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 IL25Q9H293 177 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 MAP2P11137 1827 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 TTC12Q9H892 705 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 USP25Q9UHP3 1055 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 YEATS2Q9ULM3 1422 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 PIK3C2BO00750 1634 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 CDC42BPGQ6DT37 1551 aa15.31■□□□□ 0.04
CLCNKA-204ENST00000464764 DYNC1I1O14576 645 aa15.3■□□□□ 0.04
CLCNKA-204ENST00000464764 CHL1O00533 1208 aa15.3■□□□□ 0.04
CLCNKA-204ENST00000464764 COG3Q96JB2 828 aa15.3■□□□□ 0.04
CLCNKA-204ENST00000464764 ANKRD26Q9UPS8 1709 aa15.3■□□□□ 0.04
CLCNKA-204ENST00000464764 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
CLCNKA-204ENST00000464764 MCM5P33992 734 aa15.3■□□□□ 0.04
CLCNKA-204ENST00000464764 FOXO3O43524 673 aa15.29■□□□□ 0.04
CLCNKA-204ENST00000464764 CUL4AQ13619 759 aa15.29■□□□□ 0.04
CLCNKA-204ENST00000464764 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
CLCNKA-204ENST00000464764 MAP4K4O95819 1239 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 KIAA2012Q0VF49 1180 aa15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 MLH3Q9UHC1 1453 aa15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 PNMA6EA0A0J9YXQ4 647 aa15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 EIF4A2Q14240 407 aaKnown RBP15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms