RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 PTPRGP23470 1445 aa10.19□□□□□ -0.78
NUP188-202ENST00000464729 MRPL14Q6P1L8 145 aaKnown RBP10.19□□□□□ -0.78
NUP188-202ENST00000464729 ZBBXA8MT70 800 aa10.18□□□□□ -0.78
NUP188-202ENST00000464729 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
NUP188-202ENST00000464729 INTS6LQ5JSJ4 861 aaKnown RBP10.18□□□□□ -0.78
NUP188-202ENST00000464729 NDUFB9Q9Y6M9 179 aa10.18□□□□□ -0.78
NUP188-202ENST00000464729 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
NUP188-202ENST00000464729 APBB1O00213 710 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 FBXO45P0C2W1 286 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 PPP1R26Q5T8A7 1209 aaPredicted RBP10.17□□□□□ -0.78
NUP188-202ENST00000464729 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
NUP188-202ENST00000464729 MEIOBQ8N635 442 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 FBXO41Q8TF61 875 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 ZFP42Q96MM3 310 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 ADCY10Q96PN6 1610 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 ADGRL1O94910 1474 aa10.17□□□□□ -0.78
NUP188-202ENST00000464729 SUPT5HO00267 1087 aaKnown RBP10.16□□□□□ -0.78
NUP188-202ENST00000464729 SCARF1Q14162 830 aa10.16□□□□□ -0.78
NUP188-202ENST00000464729 TOP2BQ02880 1626 aa10.15□□□□□ -0.78
NUP188-202ENST00000464729 PURBQ96QR8 312 aaKnown RBP10.15□□□□□ -0.78
NUP188-202ENST00000464729 TSPOAP1O95153 1857 aa10.15□□□□□ -0.79
NUP188-202ENST00000464729 ESPNB1AK53 854 aa10.14□□□□□ -0.79
NUP188-202ENST00000464729 DHX9Q08211 1270 aaKnown RBP10.14□□□□□ -0.79
NUP188-202ENST00000464729 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
NUP188-202ENST00000464729 PLB1Q6P1J6 1458 aa10.14□□□□□ -0.79
NUP188-202ENST00000464729 IGF1RP08069 1367 aa10.14□□□□□ -0.79
NUP188-202ENST00000464729 COL17A1Q9UMD9 1497 aaPredicted RBP10.13□□□□□ -0.79
NUP188-202ENST00000464729 NR1H3Q13133 447 aa10.13□□□□□ -0.79
NUP188-202ENST00000464729 ASXL2Q76L83 1435 aa10.13□□□□□ -0.79
NUP188-202ENST00000464729 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
NUP188-202ENST00000464729 TNIKQ9UKE5 1360 aa10.12□□□□□ -0.79
NUP188-202ENST00000464729 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
NUP188-202ENST00000464729 Q6ZVU0 165 aa10.11□□□□□ -0.79
NUP188-202ENST00000464729 PCDHB9Q9Y5E1 797 aa10.11□□□□□ -0.79
NUP188-202ENST00000464729 RUSC2Q8N2Y8 1516 aa10.11□□□□□ -0.79
NUP188-202ENST00000464729 HECW2Q9P2P5 1572 aa10.1□□□□□ -0.79
NUP188-202ENST00000464729 CARMIL2Q6F5E8 1435 aa10.1□□□□□ -0.79
NUP188-202ENST00000464729 CBLBQ13191 982 aa10.1□□□□□ -0.79
NUP188-202ENST00000464729 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
NUP188-202ENST00000464729 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
NUP188-202ENST00000464729 SEPT12Q8IYM1 358 aa10.1□□□□□ -0.79
NUP188-202ENST00000464729 TSEN34Q9BSV6 310 aaKnown RBP10.1□□□□□ -0.79
NUP188-202ENST00000464729 TBC1D2BQ9UPU7 963 aa10.1□□□□□ -0.79
NUP188-202ENST00000464729 ABCC2Q92887 1545 aa10.1□□□□□ -0.79
NUP188-202ENST00000464729 GLI2P10070 1586 aa10.09□□□□□ -0.79
NUP188-202ENST00000464729 ERVH48-1M5A8F1 160 aa10.09□□□□□ -0.79
NUP188-202ENST00000464729 UPP2O95045 317 aa10.09□□□□□ -0.79
NUP188-202ENST00000464729 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
NUP188-202ENST00000464729 BMP2P12643 396 aa10.08□□□□□ -0.8
NUP188-202ENST00000464729 NFX1Q12986 1120 aaKnown RBP10.08□□□□□ -0.8
NUP188-202ENST00000464729 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
NUP188-202ENST00000464729 RAB15P59190 212 aa10.07□□□□□ -0.8
NUP188-202ENST00000464729 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
NUP188-202ENST00000464729 MCM6Q14566 821 aa10.07□□□□□ -0.8
NUP188-202ENST00000464729 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
NUP188-202ENST00000464729 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
NUP188-202ENST00000464729 UHRF1BP1LA0JNW5 1464 aa10.06□□□□□ -0.8
NUP188-202ENST00000464729 TERTO14746 1132 aaKnown RBP10.06□□□□□ -0.8
NUP188-202ENST00000464729 LILRA1O75019 489 aa10.06□□□□□ -0.8
NUP188-202ENST00000464729 GIGYF1O75420 1035 aaPredicted RBP10.06□□□□□ -0.8
NUP188-202ENST00000464729 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
NUP188-202ENST00000464729 ZNF330Q9Y3S2 320 aaPredicted RBP10.06□□□□□ -0.8
NUP188-202ENST00000464729 UACAQ9BZF9 1416 aa10.06□□□□□ -0.8
NUP188-202ENST00000464729 TEX14Q8IWB6 1497 aa10.05□□□□□ -0.8
NUP188-202ENST00000464729 CARMIL1Q5VZK9 1371 aa10.05□□□□□ -0.8
NUP188-202ENST00000464729 IRF5Q13568 498 aa10.05□□□□□ -0.8
NUP188-202ENST00000464729 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
NUP188-202ENST00000464729 SOS2Q07890 1332 aaPredicted RBP10.05□□□□□ -0.8
NUP188-202ENST00000464729 EPRSP07814 1512 aaKnown RBP10.04□□□□□ -0.8
NUP188-202ENST00000464729 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
NUP188-202ENST00000464729 WFS1O76024 890 aa10.04□□□□□ -0.8
NUP188-202ENST00000464729 SPINT1O43278 529 aa10.03□□□□□ -0.8
NUP188-202ENST00000464729 CCDC125Q86Z20 511 aa10.03□□□□□ -0.8
NUP188-202ENST00000464729 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
NUP188-202ENST00000464729 PPRC1Q5VV67 1664 aaKnown RBP10.02□□□□□ -0.8
NUP188-202ENST00000464729 MAN1A2O60476 641 aa10.02□□□□□ -0.81
NUP188-202ENST00000464729 ADH1AP07327 375 aa10.02□□□□□ -0.81
NUP188-202ENST00000464729 ADD1P35611 737 aaKnown RBP10.02□□□□□ -0.81
NUP188-202ENST00000464729 AGBL1Q96MI9 1066 aa10.02□□□□□ -0.81
NUP188-202ENST00000464729 GDPD2Q9HCC8 539 aa10.02□□□□□ -0.81
NUP188-202ENST00000464729 LCE2CQ5TA81 110 aa10.01□□□□□ -0.81
NUP188-202ENST00000464729 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
NUP188-202ENST00000464729 NPAS3Q8IXF0 933 aa10.01□□□□□ -0.81
NUP188-202ENST00000464729 CYLDQ9NQC7 956 aa10.01□□□□□ -0.81
NUP188-202ENST00000464729 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
NUP188-202ENST00000464729 KDM5BQ9UGL1 1544 aa10.01□□□□□ -0.81
NUP188-202ENST00000464729 RELBQ01201 579 aa10□□□□□ -0.81
NUP188-202ENST00000464729 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
NUP188-202ENST00000464729 TTLL8A6PVC2 850 aa9.99□□□□□ -0.81
NUP188-202ENST00000464729 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
NUP188-202ENST00000464729 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
NUP188-202ENST00000464729 ABL2P42684 1182 aa9.98□□□□□ -0.81
NUP188-202ENST00000464729 ERVK-9P63128 1117 aa9.98□□□□□ -0.81
NUP188-202ENST00000464729 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
NUP188-202ENST00000464729 MAP3K4Q9Y6R4 1608 aa9.97□□□□□ -0.81
NUP188-202ENST00000464729 H3BM21 787 aa9.97□□□□□ -0.81
NUP188-202ENST00000464729 PTGIRP43119 386 aa9.97□□□□□ -0.81
NUP188-202ENST00000464729 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
NUP188-202ENST00000464729 COG6Q9Y2V7 657 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms