RNA–Protein interactions for RNA: ENST00000464429.1

CACNA1D-204, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-204ENST00000464429 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
CACNA1D-204ENST00000464429 MTHFSP49914 203 aa11.84□□□□□ -0.51
CACNA1D-204ENST00000464429 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
CACNA1D-204ENST00000464429 PRKRIP1Q9H875 184 aaPredicted RBP11.84□□□□□ -0.51
CACNA1D-204ENST00000464429 RGPD2P0DJD1 1756 aa11.83□□□□□ -0.52
CACNA1D-204ENST00000464429 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
CACNA1D-204ENST00000464429 CFAP53Q96M91 514 aa11.83□□□□□ -0.52
CACNA1D-204ENST00000464429 NLRP2Q9NX02 1062 aa11.83□□□□□ -0.52
CACNA1D-204ENST00000464429 EIF4A2Q14240 407 aaKnown RBP11.82□□□□□ -0.52
CACNA1D-204ENST00000464429 CDCA7Q9BWT1 371 aaPredicted RBP11.82□□□□□ -0.52
CACNA1D-204ENST00000464429 TNS2Q63HR2 1409 aa11.82□□□□□ -0.52
CACNA1D-204ENST00000464429 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
CACNA1D-204ENST00000464429 ANP32CO43423 234 aa11.81□□□□□ -0.52
CACNA1D-204ENST00000464429 USP35Q9P2H5 1018 aa11.81□□□□□ -0.52
CACNA1D-204ENST00000464429 MEGF6O75095 1541 aa11.81□□□□□ -0.52
CACNA1D-204ENST00000464429 KDRP35968 1356 aa11.8□□□□□ -0.52
CACNA1D-204ENST00000464429 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
CACNA1D-204ENST00000464429 OVOS2A0A0G2JMS6 1433 aa11.8□□□□□ -0.52
CACNA1D-204ENST00000464429 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
CACNA1D-204ENST00000464429 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
CACNA1D-204ENST00000464429 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
CACNA1D-204ENST00000464429 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
CACNA1D-204ENST00000464429 IL13P35225 146 aa11.79□□□□□ -0.52
CACNA1D-204ENST00000464429 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
CACNA1D-204ENST00000464429 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
CACNA1D-204ENST00000464429 A0A0G2JS52 829 aa11.78□□□□□ -0.52
CACNA1D-204ENST00000464429 IL2RBP14784 551 aa11.78□□□□□ -0.52
CACNA1D-204ENST00000464429 MYT1Q01538 1121 aa11.78□□□□□ -0.52
CACNA1D-204ENST00000464429 EYA1Q99502 592 aa11.78□□□□□ -0.52
CACNA1D-204ENST00000464429 BRWD3Q6RI45 1802 aa11.77□□□□□ -0.52
CACNA1D-204ENST00000464429 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.53
CACNA1D-204ENST00000464429 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
CACNA1D-204ENST00000464429 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
CACNA1D-204ENST00000464429 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.53
CACNA1D-204ENST00000464429 USHBP1Q8N6Y0 703 aa11.76□□□□□ -0.53
CACNA1D-204ENST00000464429 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
CACNA1D-204ENST00000464429 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
CACNA1D-204ENST00000464429 DDB1Q16531 1140 aa11.75□□□□□ -0.53
CACNA1D-204ENST00000464429 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
CACNA1D-204ENST00000464429 BCL9O00512 1426 aa11.74□□□□□ -0.53
CACNA1D-204ENST00000464429 U2SURPO15042 1029 aaKnown RBP11.73□□□□□ -0.53
CACNA1D-204ENST00000464429 SULT6B1Q6IMI4 303 aa11.73□□□□□ -0.53
CACNA1D-204ENST00000464429 KRT27Q7Z3Y8 459 aa11.73□□□□□ -0.53
CACNA1D-204ENST00000464429 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
CACNA1D-204ENST00000464429 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
CACNA1D-204ENST00000464429 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
CACNA1D-204ENST00000464429 PDE3BQ13370 1112 aa11.72□□□□□ -0.53
CACNA1D-204ENST00000464429 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
CACNA1D-204ENST00000464429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.72□□□□□ -0.53
CACNA1D-204ENST00000464429 EXOC5O00471 708 aa11.71□□□□□ -0.53
CACNA1D-204ENST00000464429 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.53
CACNA1D-204ENST00000464429 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.53
CACNA1D-204ENST00000464429 ZCRB1Q8TBF4 217 aaKnown RBP11.71□□□□□ -0.53
CACNA1D-204ENST00000464429 HMOX1P09601 288 aa11.7□□□□□ -0.54
CACNA1D-204ENST00000464429 AMOTQ4VCS5 1084 aa11.7□□□□□ -0.54
CACNA1D-204ENST00000464429 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
CACNA1D-204ENST00000464429 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
CACNA1D-204ENST00000464429 SPG7Q9UQ90 795 aa11.7□□□□□ -0.54
CACNA1D-204ENST00000464429 NHSQ6T4R5 1651 aa11.7□□□□□ -0.54
CACNA1D-204ENST00000464429 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
CACNA1D-204ENST00000464429 FCHSD2O94868 740 aa11.69□□□□□ -0.54
CACNA1D-204ENST00000464429 WDR43Q15061 677 aaKnown RBP eCLIP11.69□□□□□ -0.54
CACNA1D-204ENST00000464429 ILDR2Q71H61 639 aa11.69□□□□□ -0.54
CACNA1D-204ENST00000464429 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
CACNA1D-204ENST00000464429 EP400Q96L91 3159 aa11.69□□□□□ -0.54
CACNA1D-204ENST00000464429 PRKAR2BP31323 418 aa11.68□□□□□ -0.54
CACNA1D-204ENST00000464429 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
CACNA1D-204ENST00000464429 FAM196AQ6ZSG2 479 aa11.68□□□□□ -0.54
CACNA1D-204ENST00000464429 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
CACNA1D-204ENST00000464429 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
CACNA1D-204ENST00000464429 TNS1Q9HBL0 1735 aaKnown RBP11.68□□□□□ -0.54
CACNA1D-204ENST00000464429 TOGARAM1Q9Y4F4 1720 aa11.68□□□□□ -0.54
CACNA1D-204ENST00000464429 NEFMP07197 916 aa11.67□□□□□ -0.54
CACNA1D-204ENST00000464429 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
CACNA1D-204ENST00000464429 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
CACNA1D-204ENST00000464429 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
CACNA1D-204ENST00000464429 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
CACNA1D-204ENST00000464429 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
CACNA1D-204ENST00000464429 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
CACNA1D-204ENST00000464429 MRC1P22897 1456 aa11.66□□□□□ -0.54
CACNA1D-204ENST00000464429 CCER2I3L3R5 266 aa11.66□□□□□ -0.54
CACNA1D-204ENST00000464429 CYP27B1O15528 508 aa11.66□□□□□ -0.54
CACNA1D-204ENST00000464429 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
CACNA1D-204ENST00000464429 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
CACNA1D-204ENST00000464429 IFNL2Q8IZJ0 200 aa11.66□□□□□ -0.54
CACNA1D-204ENST00000464429 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
CACNA1D-204ENST00000464429 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
CACNA1D-204ENST00000464429 PHKG2P15735 406 aa11.65□□□□□ -0.54
CACNA1D-204ENST00000464429 C1orf141Q5JVX7 400 aa11.65□□□□□ -0.54
CACNA1D-204ENST00000464429 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
CACNA1D-204ENST00000464429 MAP3K5Q99683 1374 aa11.65□□□□□ -0.55
CACNA1D-204ENST00000464429 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
CACNA1D-204ENST00000464429 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
CACNA1D-204ENST00000464429 CCDC184Q52MB2 194 aa11.64□□□□□ -0.55
CACNA1D-204ENST00000464429 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
CACNA1D-204ENST00000464429 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
CACNA1D-204ENST00000464429 MTHFSDQ2M296 383 aaKnown RBP11.63□□□□□ -0.55
CACNA1D-204ENST00000464429 PLEKHF1Q96S99 279 aa11.63□□□□□ -0.55
CACNA1D-204ENST00000464429 FAM182BQ5T319 152 aa11.62□□□□□ -0.55
CACNA1D-204ENST00000464429 PNISRQ8TF01 805 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms