RNA–Protein interactions for RNA: ENST00000463588.3

RN7SL393P-201, Transcript of RNA, 7SL, cytoplasmic 393, pseudogene, humanhuman

BASIC

Gene RN7SL393P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL393P-201ENST00000463588 PNPLA7Q6ZV29 1317 aa9.43□□□□□ -0.9
RN7SL393P-201ENST00000463588 SENP3-EIF4A1A0A087X0R7 540 aa9.43□□□□□ -0.9
RN7SL393P-201ENST00000463588 FLAD1Q8NFF5 587 aa9.43□□□□□ -0.9
RN7SL393P-201ENST00000463588 CARD11Q9BXL7 1154 aa9.43□□□□□ -0.9
RN7SL393P-201ENST00000463588 LRRC4BQ9NT99 713 aa9.43□□□□□ -0.9
RN7SL393P-201ENST00000463588 TFCP2L1Q9NZI6 479 aa9.43□□□□□ -0.9
RN7SL393P-201ENST00000463588 KIF20BQ96Q89 1820 aa9.42□□□□□ -0.9
RN7SL393P-201ENST00000463588 NSD2O96028 1365 aa9.42□□□□□ -0.9
RN7SL393P-201ENST00000463588 USP47Q96K76 1375 aa9.42□□□□□ -0.9
RN7SL393P-201ENST00000463588 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
RN7SL393P-201ENST00000463588 COG3Q96JB2 828 aa9.42□□□□□ -0.9
RN7SL393P-201ENST00000463588 PKD1L3Q7Z443 1732 aa9.41□□□□□ -0.9
RN7SL393P-201ENST00000463588 ITGB4P16144 1822 aa9.4□□□□□ -0.9
RN7SL393P-201ENST00000463588 PLEKHG2Q9H7P9 1386 aa9.4□□□□□ -0.9
RN7SL393P-201ENST00000463588 CEP350Q5VT06 3117 aa9.4□□□□□ -0.9
RN7SL393P-201ENST00000463588 ZCRB1Q8TBF4 217 aaKnown RBP9.4□□□□□ -0.9
RN7SL393P-201ENST00000463588 DDX54Q8TDD1 881 aaKnown RBP9.4□□□□□ -0.9
RN7SL393P-201ENST00000463588 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.9
RN7SL393P-201ENST00000463588 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.91
RN7SL393P-201ENST00000463588 MEGF6O75095 1541 aa9.4□□□□□ -0.91
RN7SL393P-201ENST00000463588 ANKRD26Q9UPS8 1709 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 TONSLQ96HA7 1378 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 PCDH11XQ9BZA7 1347 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 PCDH11YQ9BZA8 1340 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 HOXC9P31274 260 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 AMPHP49418 695 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 SLC12A5Q9H2X9 1139 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 CD2APQ9Y5K6 639 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 C4BP0C0L5 1744 aa9.39□□□□□ -0.91
RN7SL393P-201ENST00000463588 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
RN7SL393P-201ENST00000463588 PRIM1P49642 420 aaKnown RBP9.38□□□□□ -0.91
RN7SL393P-201ENST00000463588 RAPGEF4Q8WZA2 1011 aa9.38□□□□□ -0.91
RN7SL393P-201ENST00000463588 SIN3AQ96ST3 1273 aa9.38□□□□□ -0.91
RN7SL393P-201ENST00000463588 ZNF831Q5JPB2 1677 aa9.38□□□□□ -0.91
RN7SL393P-201ENST00000463588 INSRP06213 1382 aa9.37□□□□□ -0.91
RN7SL393P-201ENST00000463588 FLT4P35916 1363 aa9.37□□□□□ -0.91
RN7SL393P-201ENST00000463588 NEUROD1Q13562 356 aa9.37□□□□□ -0.91
RN7SL393P-201ENST00000463588 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
RN7SL393P-201ENST00000463588 KLHL34Q8N239 644 aa9.37□□□□□ -0.91
RN7SL393P-201ENST00000463588 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
RN7SL393P-201ENST00000463588 KIF13BQ9NQT8 1826 aa9.36□□□□□ -0.91
RN7SL393P-201ENST00000463588 CICQ96RK0 1608 aaPredicted RBP9.36□□□□□ -0.91
RN7SL393P-201ENST00000463588 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
RN7SL393P-201ENST00000463588 TOGARAM1Q9Y4F4 1720 aa9.36□□□□□ -0.91
RN7SL393P-201ENST00000463588 ADCY9O60503 1353 aa9.36□□□□□ -0.91
RN7SL393P-201ENST00000463588 MAP2P11137 1827 aaKnown RBP9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 PELP1Q8IZL8 1130 aaKnown RBP9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 LTV1Q96GA3 475 aaPredicted RBP9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 TESK2Q96S53 571 aa9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 PALLDQ8WX93 1383 aa9.35□□□□□ -0.91
RN7SL393P-201ENST00000463588 ATP10DQ9P241 1426 aa9.34□□□□□ -0.91
RN7SL393P-201ENST00000463588 TMF1P82094 1093 aa9.34□□□□□ -0.91
RN7SL393P-201ENST00000463588 COL23A1Q86Y22 540 aaPredicted RBP9.34□□□□□ -0.91
RN7SL393P-201ENST00000463588 MSH5O43196 834 aa9.33□□□□□ -0.92
RN7SL393P-201ENST00000463588 SSFA2P28290 1259 aa9.33□□□□□ -0.92
RN7SL393P-201ENST00000463588 GPBP1L1Q9HC44 474 aaPredicted RBP9.33□□□□□ -0.92
RN7SL393P-201ENST00000463588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.33□□□□□ -0.92
RN7SL393P-201ENST00000463588 ST20-MTHFSA0A0A6YYL1 179 aa9.32□□□□□ -0.92
RN7SL393P-201ENST00000463588 FYB1O15117 783 aa9.32□□□□□ -0.92
RN7SL393P-201ENST00000463588 YBX3P16989 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
RN7SL393P-201ENST00000463588 NBPF6Q5VWK0 638 aa9.32□□□□□ -0.92
RN7SL393P-201ENST00000463588 AK7Q96M32 723 aa9.32□□□□□ -0.92
RN7SL393P-201ENST00000463588 NBPF4Q96M43 638 aa9.32□□□□□ -0.92
RN7SL393P-201ENST00000463588 HSPA6P17066 643 aa9.31□□□□□ -0.92
RN7SL393P-201ENST00000463588 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
RN7SL393P-201ENST00000463588 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
RN7SL393P-201ENST00000463588 BRCA1P38398 1863 aaKnown RBP9.31□□□□□ -0.92
RN7SL393P-201ENST00000463588 ARFGEF1Q9Y6D6 1849 aa9.31□□□□□ -0.92
RN7SL393P-201ENST00000463588 COL5A3P25940 1745 aaPredicted RBP9.3□□□□□ -0.92
RN7SL393P-201ENST00000463588 KIAA1551Q9HCM1 1747 aa9.29□□□□□ -0.92
RN7SL393P-201ENST00000463588 KCNQ4P56696 695 aa9.29□□□□□ -0.92
RN7SL393P-201ENST00000463588 RRS1Q15050 365 aaKnown RBP9.29□□□□□ -0.92
RN7SL393P-201ENST00000463588 MPRIPQ6WCQ1 1025 aa9.29□□□□□ -0.92
RN7SL393P-201ENST00000463588 IGSF1Q8N6C5 1336 aa9.29□□□□□ -0.92
RN7SL393P-201ENST00000463588 CYP27B1O15528 508 aa9.28□□□□□ -0.92
RN7SL393P-201ENST00000463588 ADRA2BP18089 450 aa9.28□□□□□ -0.92
RN7SL393P-201ENST00000463588 HSP90AB2PQ58FF8 381 aa9.28□□□□□ -0.92
RN7SL393P-201ENST00000463588 GGNBP2Q9H3C7 697 aa9.28□□□□□ -0.92
RN7SL393P-201ENST00000463588 WASHC2AQ641Q2 1341 aa9.28□□□□□ -0.92
RN7SL393P-201ENST00000463588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 LOC102724428A0A0B4J2F2 783 aa9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 SIK1P57059 783 aa9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 TGFB2P61812 414 aa9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 IFNL2Q8IZJ0 200 aa9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 C4AP0C0L4 1744 aa9.27□□□□□ -0.93
RN7SL393P-201ENST00000463588 HSP90AB1P08238 724 aaKnown RBP9.26□□□□□ -0.93
RN7SL393P-201ENST00000463588 NLGN1Q8N2Q7 840 aa9.26□□□□□ -0.93
RN7SL393P-201ENST00000463588 USHBP1Q8N6Y0 703 aa9.26□□□□□ -0.93
RN7SL393P-201ENST00000463588 PIGBQ92521 554 aa9.26□□□□□ -0.93
RN7SL393P-201ENST00000463588 N4BP2Q86UW6 1770 aaPredicted RBP9.25□□□□□ -0.93
RN7SL393P-201ENST00000463588 C10orf71Q711Q0 1435 aa9.25□□□□□ -0.93
RN7SL393P-201ENST00000463588 APLP1P51693 650 aa9.25□□□□□ -0.93
RN7SL393P-201ENST00000463588 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
RN7SL393P-201ENST00000463588 TNRC6CQ9HCJ0 1690 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms