RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 TLL1O43897 1013 aa6.12□□□□□ -1.43
GPNMB-205ENST00000463011 ERFEQ4G0M1 354 aa6.12□□□□□ -1.43
GPNMB-205ENST00000463011 RNF20Q5VTR2 975 aa6.12□□□□□ -1.43
GPNMB-205ENST00000463011 SH3RF1Q7Z6J0 888 aa6.12□□□□□ -1.43
GPNMB-205ENST00000463011 NPAS4Q8IUM7 802 aa6.12□□□□□ -1.43
GPNMB-205ENST00000463011 TUT1Q9H6E5 874 aaKnown RBP6.12□□□□□ -1.43
GPNMB-205ENST00000463011 ICMTO60725 284 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 ADH1BP00325 375 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 USP4Q13107 963 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 LINC01559Q495D7 138 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 BPHLQ86WA6 291 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-205ENST00000463011 GLYCTKQ8IVS8 523 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 FOXJ1Q92949 421 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 MKNK1Q9BUB5 465 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 SEPT3Q9UH03 358 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 EGFL7Q9UHF1 273 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 PCDHB11Q9Y5F2 797 aa6.11□□□□□ -1.43
GPNMB-205ENST00000463011 ZPR1O75312 459 aa6.1□□□□□ -1.43
GPNMB-205ENST00000463011 ZNF326Q5BKZ1 582 aaKnown RBP6.1□□□□□ -1.43
GPNMB-205ENST00000463011 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
GPNMB-205ENST00000463011 CAPN12Q6ZSI9 719 aa6.1□□□□□ -1.43
GPNMB-205ENST00000463011 GTF3C2Q8WUA4 911 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-205ENST00000463011 MAPK1P28482 360 aa6.09□□□□□ -1.43
GPNMB-205ENST00000463011 TAGLNQ01995 201 aaKnown RBP6.09□□□□□ -1.43
GPNMB-205ENST00000463011 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
GPNMB-205ENST00000463011 GAS2L2Q8NHY3 880 aa6.09□□□□□ -1.43
GPNMB-205ENST00000463011 SLC10A4Q96EP9 437 aa6.09□□□□□ -1.43
GPNMB-205ENST00000463011 DNMT3AQ9Y6K1 912 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-205ENST00000463011 C21orf2O43822 256 aa6.08□□□□□ -1.44
GPNMB-205ENST00000463011 RAB15P59190 212 aa6.08□□□□□ -1.44
GPNMB-205ENST00000463011 FKBP4Q02790 459 aaKnown RBP eCLIP6.08□□□□□ -1.44
GPNMB-205ENST00000463011 MTMR3Q13615 1198 aa6.08□□□□□ -1.44
GPNMB-205ENST00000463011 ZNF511Q8NB15 262 aa6.08□□□□□ -1.44
GPNMB-205ENST00000463011 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
GPNMB-205ENST00000463011 SLC6A16Q9GZN6 736 aa6.08□□□□□ -1.44
GPNMB-205ENST00000463011 WEE1P30291 646 aa6.07□□□□□ -1.44
GPNMB-205ENST00000463011 FKBP5Q13451 457 aaPredicted RBP6.07□□□□□ -1.44
GPNMB-205ENST00000463011 ECM1Q16610 540 aa6.07□□□□□ -1.44
GPNMB-205ENST00000463011 PURBQ96QR8 312 aaKnown RBP6.07□□□□□ -1.44
GPNMB-205ENST00000463011 MTRQ99707 1265 aa6.07□□□□□ -1.44
GPNMB-205ENST00000463011 PLA2G2EQ9NZK7 142 aa6.07□□□□□ -1.44
GPNMB-205ENST00000463011 ESPNB1AK53 854 aa6.06□□□□□ -1.44
GPNMB-205ENST00000463011 TCF3P15923 654 aa6.06□□□□□ -1.44
GPNMB-205ENST00000463011 NAA30Q147X3 362 aaPredicted RBP6.06□□□□□ -1.44
GPNMB-205ENST00000463011 NBPF20Q3BBV1 942 aa6.06□□□□□ -1.44
GPNMB-205ENST00000463011 THSD4Q6ZMP0 1018 aa6.06□□□□□ -1.44
GPNMB-205ENST00000463011 ZSCAN29Q8IWY8 852 aaPredicted RBP6.06□□□□□ -1.44
GPNMB-205ENST00000463011 ZNF516Q92618 1163 aa6.06□□□□□ -1.44
GPNMB-205ENST00000463011 ASB16Q96NS5 453 aa6.06□□□□□ -1.44
GPNMB-205ENST00000463011 DCTN4Q9UJW0 460 aa6.06□□□□□ -1.44
GPNMB-205ENST00000463011 MYCP01106 439 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-205ENST00000463011 ARHGAP4P98171 946 aa6.05□□□□□ -1.44
GPNMB-205ENST00000463011 SF3B2Q13435 895 aaKnown RBP6.05□□□□□ -1.44
GPNMB-205ENST00000463011 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
GPNMB-205ENST00000463011 SEPT12Q8IYM1 358 aa6.05□□□□□ -1.44
GPNMB-205ENST00000463011 C1QTNF2Q9BXJ5 285 aa6.05□□□□□ -1.44
GPNMB-205ENST00000463011 M0R2N6 131 aa6.04□□□□□ -1.44
GPNMB-205ENST00000463011 PTCD1O75127 700 aaKnown RBP6.04□□□□□ -1.44
GPNMB-205ENST00000463011 SH3BP2P78314 561 aa6.04□□□□□ -1.44
GPNMB-205ENST00000463011 KCTD12Q96CX2 325 aaKnown RBP6.04□□□□□ -1.44
GPNMB-205ENST00000463011 ZNF358Q9NW07 568 aa6.04□□□□□ -1.44
GPNMB-205ENST00000463011 FCF1Q9Y324 198 aaKnown RBP6.04□□□□□ -1.44
GPNMB-205ENST00000463011 S1PR4O95977 384 aa6.03□□□□□ -1.44
GPNMB-205ENST00000463011 SCTRP47872 440 aa6.03□□□□□ -1.44
GPNMB-205ENST00000463011 CCDC125Q86Z20 511 aa6.03□□□□□ -1.44
GPNMB-205ENST00000463011 TRMT44Q8IYL2 757 aaKnown RBP6.03□□□□□ -1.44
GPNMB-205ENST00000463011 NKX2-3Q8TAU0 364 aa6.03□□□□□ -1.44
GPNMB-205ENST00000463011 KCTD15Q96SI1 283 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-205ENST00000463011 ESF1Q9H501 851 aaKnown RBP6.03□□□□□ -1.44
GPNMB-205ENST00000463011 CDV3Q9UKY7 258 aaKnown RBP6.03□□□□□ -1.44
GPNMB-205ENST00000463011 ERVH48-1M5A8F1 160 aa6.02□□□□□ -1.45
GPNMB-205ENST00000463011 VAMP1P23763 118 aa6.02□□□□□ -1.45
GPNMB-205ENST00000463011 EAPPQ56P03 285 aaPredicted RBP6.02□□□□□ -1.45
GPNMB-205ENST00000463011 TJAP1Q5JTD0 557 aa6.02□□□□□ -1.45
GPNMB-205ENST00000463011 TNS4Q8IZW8 715 aa6.02□□□□□ -1.45
GPNMB-205ENST00000463011 SCG3Q8WXD2 468 aaKnown RBP6.02□□□□□ -1.45
GPNMB-205ENST00000463011 IL21Q9HBE4 155 aa6.02□□□□□ -1.45
GPNMB-205ENST00000463011 TMEM229AB2RXF0 380 aa6.01□□□□□ -1.45
GPNMB-205ENST00000463011 STAU1O95793 577 aaKnown RBP6.01□□□□□ -1.45
GPNMB-205ENST00000463011 IGFBP4P22692 258 aa6.01□□□□□ -1.45
GPNMB-205ENST00000463011 INTS6LQ5JSJ4 861 aaKnown RBP6.01□□□□□ -1.45
GPNMB-205ENST00000463011 NYAP1Q6ZVC0 841 aa6.01□□□□□ -1.45
GPNMB-205ENST00000463011 RGL4Q8IZJ4 473 aa6.01□□□□□ -1.45
GPNMB-205ENST00000463011 HELQQ8TDG4 1101 aa6.01□□□□□ -1.45
GPNMB-205ENST00000463011 CHMP7Q8WUX9 453 aaPredicted RBP6.01□□□□□ -1.45
GPNMB-205ENST00000463011 VTI1AQ96AJ9 217 aa6.01□□□□□ -1.45
GPNMB-205ENST00000463011 ATAD2Q6PL18 1390 aa6.01□□□□□ -1.45
GPNMB-205ENST00000463011 FOXO3O43524 673 aa6□□□□□ -1.45
GPNMB-205ENST00000463011 FAM13AO94988 1023 aa6□□□□□ -1.45
GPNMB-205ENST00000463011 PTPN5P54829 565 aa6□□□□□ -1.45
GPNMB-205ENST00000463011 TSNAXIP1Q2TAA8 658 aa6□□□□□ -1.45
GPNMB-205ENST00000463011 VASH1Q7L8A9 365 aaPredicted RBP6□□□□□ -1.45
GPNMB-205ENST00000463011 COL26A1Q96A83 441 aa6□□□□□ -1.45
GPNMB-205ENST00000463011 SERTAD1Q9UHV2 236 aa6□□□□□ -1.45
GPNMB-205ENST00000463011 PPEF1O14829 653 aaPredicted RBP5.99□□□□□ -1.45
GPNMB-205ENST00000463011 BACH1O14867 736 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 RECKO95980 971 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 MPSTP25325 297 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 SCNN1DP51172 638 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 GDF10P55107 478 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms