RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RIMBP3Q9UFD9 1639 aa8.26□□□□□ -1.09
ATPAF1-203ENST00000460928 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
ATPAF1-203ENST00000460928 SOCS7O14512 581 aa8.26□□□□□ -1.09
ATPAF1-203ENST00000460928 CTSOP43234 321 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-203ENST00000460928 CCDC155Q8N6L0 562 aa8.26□□□□□ -1.09
ATPAF1-203ENST00000460928 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-203ENST00000460928 INSM2Q96T92 566 aaPredicted RBP8.26□□□□□ -1.09
ATPAF1-203ENST00000460928 ZBBXA8MT70 800 aa8.25□□□□□ -1.09
ATPAF1-203ENST00000460928 CCDC125Q86Z20 511 aa8.25□□□□□ -1.09
ATPAF1-203ENST00000460928 RNF217Q8TC41 542 aa8.25□□□□□ -1.09
ATPAF1-203ENST00000460928 CCDC88BA6NC98 1476 aa8.25□□□□□ -1.09
ATPAF1-203ENST00000460928 KDF1Q8NAX2 398 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-203ENST00000460928 ADD1P35611 737 aaKnown RBP8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 PTGIRP43119 386 aa8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 RAB15P59190 212 aa8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 KRT76Q01546 638 aa8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 GPR161Q8N6U8 529 aaKnown RBP8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 IL27Q8NEV9 243 aa8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 ARXQ96QS3 562 aa8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 POLMQ9NP87 494 aaPredicted RBP8.23□□□□□ -1.09
ATPAF1-203ENST00000460928 FBXO45P0C2W1 286 aa8.22□□□□□ -1.09
ATPAF1-203ENST00000460928 ITGA6P23229 1130 aa8.22□□□□□ -1.09
ATPAF1-203ENST00000460928 FOXD4L5Q5VV16 416 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-203ENST00000460928 BANK1Q8NDB2 785 aa8.22□□□□□ -1.09
ATPAF1-203ENST00000460928 ZNF395Q9H8N7 513 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-203ENST00000460928 SENP3-EIF4A1A0A087X0R7 540 aa8.21□□□□□ -1.1
ATPAF1-203ENST00000460928 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
ATPAF1-203ENST00000460928 ZNF592Q92610 1267 aa8.2□□□□□ -1.1
ATPAF1-203ENST00000460928 COL25A1Q9BXS0 654 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-203ENST00000460928 PCDHB9Q9Y5E1 797 aa8.2□□□□□ -1.1
ATPAF1-203ENST00000460928 GIGYF1O75420 1035 aaPredicted RBP8.19□□□□□ -1.1
ATPAF1-203ENST00000460928 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
ATPAF1-203ENST00000460928 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
ATPAF1-203ENST00000460928 CYLDQ9NQC7 956 aa8.19□□□□□ -1.1
ATPAF1-203ENST00000460928 RNF144AP50876 292 aaPredicted RBP8.18□□□□□ -1.1
ATPAF1-203ENST00000460928 NR1H3Q13133 447 aa8.18□□□□□ -1.1
ATPAF1-203ENST00000460928 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
ATPAF1-203ENST00000460928 KIF21AQ7Z4S6 1674 aa8.18□□□□□ -1.1
ATPAF1-203ENST00000460928 GPR37L1O60883 481 aa8.17□□□□□ -1.1
ATPAF1-203ENST00000460928 ERVK-9P63128 1117 aa8.17□□□□□ -1.1
ATPAF1-203ENST00000460928 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
ATPAF1-203ENST00000460928 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
ATPAF1-203ENST00000460928 LYSMD3Q7Z3D4 306 aa8.17□□□□□ -1.1
ATPAF1-203ENST00000460928 VWA5B2Q8N398 1253 aa8.17□□□□□ -1.1
ATPAF1-203ENST00000460928 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
ATPAF1-203ENST00000460928 ATP5J2-PTCD1G3V325 749 aa8.16□□□□□ -1.1
ATPAF1-203ENST00000460928 SLURP2P0DP57 97 aa8.16□□□□□ -1.1
ATPAF1-203ENST00000460928 GPC1P35052 558 aa8.16□□□□□ -1.1
ATPAF1-203ENST00000460928 RNFT1Q5M7Z0 435 aa8.16□□□□□ -1.1
ATPAF1-203ENST00000460928 MTMR14Q8NCE2 650 aa8.16□□□□□ -1.1
ATPAF1-203ENST00000460928 APBB1O00213 710 aa8.15□□□□□ -1.1
ATPAF1-203ENST00000460928 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
ATPAF1-203ENST00000460928 ZNF330Q9Y3S2 320 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-203ENST00000460928 NDUFB9Q9Y6M9 179 aa8.15□□□□□ -1.1
ATPAF1-203ENST00000460928 ARHGEF11O15085 1522 aa8.14□□□□□ -1.11
ATPAF1-203ENST00000460928 CDC14CA4D256 554 aa8.14□□□□□ -1.11
ATPAF1-203ENST00000460928 CFTRP13569 1480 aa8.13□□□□□ -1.11
ATPAF1-203ENST00000460928 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
ATPAF1-203ENST00000460928 LAMC3Q9Y6N6 1575 aa8.13□□□□□ -1.11
ATPAF1-203ENST00000460928 LOC100996750A0A140TA64 210 aa8.12□□□□□ -1.11
ATPAF1-203ENST00000460928 A0A1W2PRU2 124 aa8.12□□□□□ -1.11
ATPAF1-203ENST00000460928 GSK3AP49840 483 aa8.12□□□□□ -1.11
ATPAF1-203ENST00000460928 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
ATPAF1-203ENST00000460928 CYP2U1Q7Z449 544 aa8.12□□□□□ -1.11
ATPAF1-203ENST00000460928 KRTAP4-6Q9BYQ5 205 aa8.12□□□□□ -1.11
ATPAF1-203ENST00000460928 TRAK2O60296 914 aa8.11□□□□□ -1.11
ATPAF1-203ENST00000460928 PRICKLE2Q7Z3G6 844 aa8.11□□□□□ -1.11
ATPAF1-203ENST00000460928 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
ATPAF1-203ENST00000460928 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-203ENST00000460928 CLN3Q13286 438 aa8.1□□□□□ -1.11
ATPAF1-203ENST00000460928 SNRKQ9NRH2 765 aa8.1□□□□□ -1.11
ATPAF1-203ENST00000460928 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-203ENST00000460928 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
ATPAF1-203ENST00000460928 MEN1O00255 615 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 SCTRP47872 440 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 WDR44Q5JSH3 913 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 CYB5RLQ6IPT4 315 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 HOMEZQ8IX15 550 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 TRIM22Q8IYM9 498 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 ZNF837Q96EG3 531 aaPredicted RBP8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 OSBPL3Q9H4L5 887 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 DYRK1BQ9Y463 629 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 PCDHB11Q9Y5F2 797 aa8.09□□□□□ -1.11
ATPAF1-203ENST00000460928 ARHGEF15O94989 841 aa8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 RHOQP17081 205 aa8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 SRSF11Q05519 484 aaKnown RBP8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 GAS6Q14393 721 aa8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 TMEM151AQ8N4L1 468 aa8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 GRIP2Q9C0E4 1043 aa8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 PDS5BQ9NTI5 1447 aa8.08□□□□□ -1.12
ATPAF1-203ENST00000460928 SPATA31C2B4DYI2 1134 aa8.07□□□□□ -1.12
ATPAF1-203ENST00000460928 ADAMTS2O95450 1211 aa8.07□□□□□ -1.12
ATPAF1-203ENST00000460928 KCTD17Q8N5Z5 321 aa8.07□□□□□ -1.12
ATPAF1-203ENST00000460928 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
ATPAF1-203ENST00000460928 RASSF7Q02833 373 aa8.06□□□□□ -1.12
ATPAF1-203ENST00000460928 PRDM2Q13029 1718 aa8.06□□□□□ -1.12
ATPAF1-203ENST00000460928 CEP164Q9UPV0 1460 aa8.06□□□□□ -1.12
ATPAF1-203ENST00000460928 GDF11O95390 407 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms