RNA–Protein interactions for RNA: ENST00000460887.1

AMPH-205, Transcript of amphiphysin, humanhuman

TSL 3

Gene AMPH, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-205ENST00000460887 ONECUT3O60422 494 aaPredicted RBP23.38■■□□□ 1.33
AMPH-205ENST00000460887 SHANK3Q9BYB0 1731 aa23.38■■□□□ 1.33
AMPH-205ENST00000460887 TATP17735 454 aaPredicted RBP23.37■■□□□ 1.33
AMPH-205ENST00000460887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.33
AMPH-205ENST00000460887 RXRBP28702 533 aa23.35■■□□□ 1.33
AMPH-205ENST00000460887 PRKAR2BP31323 418 aa23.35■■□□□ 1.33
AMPH-205ENST00000460887 FAM98CQ17RN3 349 aaKnown RBP23.35■■□□□ 1.33
AMPH-205ENST00000460887 TNS2Q63HR2 1409 aa23.34■■□□□ 1.33
AMPH-205ENST00000460887 POTEAQ6S8J7 498 aa23.34■■□□□ 1.33
AMPH-205ENST00000460887 PLEKHF1Q96S99 279 aa23.34■■□□□ 1.33
AMPH-205ENST00000460887 NEFMP07197 916 aa23.33■■□□□ 1.33
AMPH-205ENST00000460887 AMOTQ4VCS5 1084 aa23.33■■□□□ 1.33
AMPH-205ENST00000460887 FAM9BQ8IZU0 186 aa23.32■■□□□ 1.32
AMPH-205ENST00000460887 RUNDC1Q96C34 613 aa23.32■■□□□ 1.32
AMPH-205ENST00000460887 BRWD3Q6RI45 1802 aa23.31■■□□□ 1.32
AMPH-205ENST00000460887 PLEKHO1Q53GL0 409 aaPredicted RBP23.31■■□□□ 1.32
AMPH-205ENST00000460887 SPG7Q9UQ90 795 aa23.31■■□□□ 1.32
AMPH-205ENST00000460887 MAPK8IP3Q9UPT6 1336 aa23.31■■□□□ 1.32
AMPH-205ENST00000460887 DLG5Q8TDM6 1919 aa23.3■■□□□ 1.32
AMPH-205ENST00000460887 DDB1Q16531 1140 aa23.29■■□□□ 1.32
AMPH-205ENST00000460887 ZCRB1Q8TBF4 217 aaKnown RBP23.29■■□□□ 1.32
AMPH-205ENST00000460887 EXOC5O00471 708 aa23.28■■□□□ 1.32
AMPH-205ENST00000460887 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
AMPH-205ENST00000460887 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
AMPH-205ENST00000460887 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
AMPH-205ENST00000460887 VIRMAQ69YN4 1812 aaKnown RBP23.27■■□□□ 1.32
AMPH-205ENST00000460887 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.32
AMPH-205ENST00000460887 GAS2L2Q8NHY3 880 aa23.27■■□□□ 1.32
AMPH-205ENST00000460887 RGS12O14924 1447 aa23.26■■□□□ 1.31
AMPH-205ENST00000460887 A0A0G2JS52 829 aa23.25■■□□□ 1.31
AMPH-205ENST00000460887 MYT1Q01538 1121 aa23.25■■□□□ 1.31
AMPH-205ENST00000460887 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
AMPH-205ENST00000460887 CCDC146Q8IYE0 955 aa23.25■■□□□ 1.31
AMPH-205ENST00000460887 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
AMPH-205ENST00000460887 SCN11AQ9UI33 1791 aa23.23■■□□□ 1.31
AMPH-205ENST00000460887 NFE2L2Q16236 605 aa23.23■■□□□ 1.31
AMPH-205ENST00000460887 IFNL2Q8IZJ0 200 aa23.23■■□□□ 1.31
AMPH-205ENST00000460887 NCBP3Q53F19 620 aaKnown RBP23.22■■□□□ 1.31
AMPH-205ENST00000460887 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
AMPH-205ENST00000460887 PHKG2P15735 406 aa23.21■■□□□ 1.31
AMPH-205ENST00000460887 PDE3BQ13370 1112 aa23.21■■□□□ 1.31
AMPH-205ENST00000460887 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
AMPH-205ENST00000460887 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
AMPH-205ENST00000460887 CYP27B1O15528 508 aa23.2■■□□□ 1.3
AMPH-205ENST00000460887 C1orf141Q5JVX7 400 aa23.2■■□□□ 1.3
AMPH-205ENST00000460887 BCL9O00512 1426 aa23.19■■□□□ 1.3
AMPH-205ENST00000460887 APAF1O14727 1248 aa23.19■■□□□ 1.3
AMPH-205ENST00000460887 HSP90AB1P08238 724 aaKnown RBP23.19■■□□□ 1.3
AMPH-205ENST00000460887 TMPOP42166 694 aaKnown RBP23.19■■□□□ 1.3
AMPH-205ENST00000460887 NKX1-1Q15270 411 aaPredicted RBP23.19■■□□□ 1.3
AMPH-205ENST00000460887 NGEFQ8N5V2 710 aa23.19■■□□□ 1.3
AMPH-205ENST00000460887 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
AMPH-205ENST00000460887 DDX54Q8TDD1 881 aaKnown RBP23.18■■□□□ 1.3
AMPH-205ENST00000460887 DOT1LQ8TEK3 1739 aa23.17■■□□□ 1.3
AMPH-205ENST00000460887 TOGARAM1Q9Y4F4 1720 aa23.17■■□□□ 1.3
AMPH-205ENST00000460887 GNAT3A8MTJ3 354 aa23.17■■□□□ 1.3
AMPH-205ENST00000460887 KRT27Q7Z3Y8 459 aa23.17■■□□□ 1.3
AMPH-205ENST00000460887 MARCH10Q8NA82 808 aaPredicted RBP23.17■■□□□ 1.3
AMPH-205ENST00000460887 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
AMPH-205ENST00000460887 SBF2Q86WG5 1849 aa23.16■■□□□ 1.3
AMPH-205ENST00000460887 RIPK4P57078 832 aa23.15■■□□□ 1.3
AMPH-205ENST00000460887 DCAF5Q96JK2 942 aa23.15■■□□□ 1.3
AMPH-205ENST00000460887 CCDC27Q2M243 656 aa23.14■■□□□ 1.29
AMPH-205ENST00000460887 ITGB4P16144 1822 aa23.14■■□□□ 1.29
AMPH-205ENST00000460887 KDM6AO15550 1401 aaPredicted RBP23.14■■□□□ 1.29
AMPH-205ENST00000460887 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.29
AMPH-205ENST00000460887 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
AMPH-205ENST00000460887 NHSQ6T4R5 1651 aa23.13■■□□□ 1.29
AMPH-205ENST00000460887 MRC1P22897 1456 aa23.12■■□□□ 1.29
AMPH-205ENST00000460887 RRP7AQ9Y3A4 280 aaKnown RBP23.12■■□□□ 1.29
AMPH-205ENST00000460887 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
AMPH-205ENST00000460887 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
AMPH-205ENST00000460887 FAM196AQ6ZSG2 479 aa23.1■■□□□ 1.29
AMPH-205ENST00000460887 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
AMPH-205ENST00000460887 MPRIPQ6WCQ1 1025 aa23.09■■□□□ 1.29
AMPH-205ENST00000460887 TRIM35Q9UPQ4 493 aa23.09■■□□□ 1.29
AMPH-205ENST00000460887 ERVV-2B6SEH9 535 aa23.08■■□□□ 1.29
AMPH-205ENST00000460887 IL17REQ8NFR9 667 aa23.08■■□□□ 1.29
AMPH-205ENST00000460887 LGR6Q9HBX8 967 aa23.06■■□□□ 1.28
AMPH-205ENST00000460887 CALD1Q05682 793 aaKnown RBP23.05■■□□□ 1.28
AMPH-205ENST00000460887 MCM10Q7L590 875 aa23.05■■□□□ 1.28
AMPH-205ENST00000460887 HNRNPUQ00839 825 aaKnown RBP eCLIP23.04■■□□□ 1.28
AMPH-205ENST00000460887 WWC1Q8IX03 1113 aa23.04■■□□□ 1.28
AMPH-205ENST00000460887 PAPPAQ13219 1627 aa23.04■■□□□ 1.28
AMPH-205ENST00000460887 TEFQ10587 303 aa23.03■■□□□ 1.28
AMPH-205ENST00000460887 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
AMPH-205ENST00000460887 FAM182BQ5T319 152 aa23.03■■□□□ 1.28
AMPH-205ENST00000460887 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
AMPH-205ENST00000460887 BTAF1O14981 1849 aa23.03■■□□□ 1.28
AMPH-205ENST00000460887 KDM3BQ7LBC6 1761 aa23.02■■□□□ 1.28
AMPH-205ENST00000460887 KAT6BQ8WYB5 2073 aa23.02■■□□□ 1.28
AMPH-205ENST00000460887 ZNF521Q96K83 1311 aa23.02■■□□□ 1.28
AMPH-205ENST00000460887 CABP4P57796 275 aa23.01■■□□□ 1.27
AMPH-205ENST00000460887 WDR63Q8IWG1 891 aa23.01■■□□□ 1.27
AMPH-205ENST00000460887 TNS1Q9HBL0 1735 aaKnown RBP23.01■■□□□ 1.27
AMPH-205ENST00000460887 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
AMPH-205ENST00000460887 IL16Q14005 1332 aa23■■□□□ 1.27
AMPH-205ENST00000460887 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
AMPH-205ENST00000460887 PRIM1P49642 420 aaKnown RBP22.99■■□□□ 1.27
AMPH-205ENST00000460887 THUMPD2Q9BTF0 503 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms