RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 CLUAP1Q96AJ1 413 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PRAM1Q96QH2 718 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 HDAC9Q9UKV0 1011 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 C3P01024 1663 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 HSP90AB4PQ58FF6 505 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 BBXQ8WY36 941 aaPredicted RBP7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 LRRC59Q96AG4 307 aaKnown RBP7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 MINK1Q8N4C8 1332 aaPredicted RBP7.57□□□□□ -1.2
HLA-DQA1-205ENST00000460633 KIAA1210Q9ULL0 1709 aa7.57□□□□□ -1.2
HLA-DQA1-205ENST00000460633 WASLO00401 505 aaPredicted RBP7.57□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ST5P78524 1137 aa7.57□□□□□ -1.2
HLA-DQA1-205ENST00000460633 LPXNO60711 386 aa7.57□□□□□ -1.2
HLA-DQA1-205ENST00000460633 AXDND1Q5T1B0 1012 aaPredicted RBP7.57□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CCDC61Q9Y6R9 512 aa7.57□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PIK3C2BO00750 1634 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 IKQ13123 557 aaPredicted RBP7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PPP4R3BQ5MIZ7 849 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 SLC26A8Q96RN1 970 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PHF8Q9UPP1 1060 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CFAP70Q5T0N1 1121 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 RBM42Q9BTD8 480 aaKnown RBP7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CDK19Q9BWU1 502 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 STARD3NLO95772 234 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ATF7IPQ6VMQ6 1270 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 MED14O60244 1454 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ARHGAP23Q9P227 1491 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 U2AF1L5P0DN76 240 aaPredicted RBP7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 U2AF1Q01081 240 aaKnown RBP eCLIP7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 TBC1D2BQ9UPU7 963 aa7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 DDX49Q9Y6V7 483 aaKnown RBP7.56□□□□□ -1.2
HLA-DQA1-205ENST00000460633 APBB1O00213 710 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 SKOR2Q2VWA4 1001 aaPredicted RBP7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 GAS2L2Q8NHY3 880 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CLTCL1P53675 1640 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 EHMT1Q9H9B1 1298 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 BMS1Q14692 1282 aaKnown RBP7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 FLAD1Q8NFF5 587 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 TEX13AQ9BXU3 409 aaPredicted RBP7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CERKQ8TCT0 537 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 SYAP1Q96A49 352 aaPredicted RBP7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CCDC7Q96M83 1385 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ZBTB24O43167 697 aaPredicted RBP7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 RBM5P52756 815 aaKnown RBP eCLIP7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CABP4P57796 275 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 TRDNQ13061 729 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 HSP90AB3PQ58FF7 597 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 BACH2Q9BYV9 841 aa7.55□□□□□ -1.2
HLA-DQA1-205ENST00000460633 SPATA31E1Q6ZUB1 1445 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 IQGAP1P46940 1657 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 BRMS1Q9HCU9 246 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ST20-MTHFSA0A0A6YYL1 179 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 TNNT3P45378 269 aaPredicted RBP7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 BCL2L13Q9BXK5 485 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 EXOC5O00471 708 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PPP4R3AQ6IN85 833 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ABTB2Q8N961 1025 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CHMP5Q9NZZ3 219 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PDE6BP35913 854 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 TRAF1Q13077 416 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 TNIP1Q15025 636 aa7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
HLA-DQA1-205ENST00000460633 GPR162Q16538 588 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 NUDT16Q96DE0 195 aaKnown RBP7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 COG6Q9Y2V7 657 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ADGRL3Q9HAR2 1447 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 KIF7Q2M1P5 1343 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 E9PSI1 815 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 NLRP6P59044 892 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 TRIM29Q14134 588 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 NOC3LQ8WTT2 800 aaKnown RBP7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 OTUD7BQ6GQQ9 843 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 APPP05067 770 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 XBP1P17861 261 aa7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.53□□□□□ -1.2
HLA-DQA1-205ENST00000460633 ADGRF5Q8IZF2 1346 aa7.52□□□□□ -1.2
HLA-DQA1-205ENST00000460633 MRE11P49959 708 aa7.52□□□□□ -1.2
HLA-DQA1-205ENST00000460633 CCDC184Q52MB2 194 aa7.52□□□□□ -1.2
HLA-DQA1-205ENST00000460633 JDP2Q8WYK2 163 aa7.52□□□□□ -1.2
HLA-DQA1-205ENST00000460633 DNAJC2Q99543 621 aaKnown RBP7.52□□□□□ -1.2
HLA-DQA1-205ENST00000460633 KDM4FA0A1W2PPD8 638 aa7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 HSPA2P54652 639 aa7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 RUFY2Q8WXA3 655 aa7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 C9orf78Q9NZ63 289 aaPredicted RBP7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 PARP3Q9Y6F1 533 aa7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 MROH1Q8NDA8 1641 aa7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 BIN2Q9UBW5 565 aaPredicted RBP7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 PANK3Q9H999 370 aa7.52□□□□□ -1.21
HLA-DQA1-205ENST00000460633 TCIRG1Q13488 830 aa7.51□□□□□ -1.21
HLA-DQA1-205ENST00000460633 DRC1Q96MC2 740 aa7.51□□□□□ -1.21
HLA-DQA1-205ENST00000460633 ATP7BP35670 1465 aa7.51□□□□□ -1.21
HLA-DQA1-205ENST00000460633 NOL8Q76FK4 1167 aaKnown RBP7.51□□□□□ -1.21
HLA-DQA1-205ENST00000460633 POLR1AO95602 1720 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQA1-205ENST00000460633 NUTM2FA1L443 756 aa7.51□□□□□ -1.21
HLA-DQA1-205ENST00000460633 SART3Q15020 963 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms