RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PROCA1Q8NCQ7 364 aaPredicted RBP7.19□□□□□ -1.26
RFC4-211ENST00000460408 CUEDC1Q9NWM3 386 aaPredicted RBP7.19□□□□□ -1.26
RFC4-211ENST00000460408 PNMA1Q8ND90 353 aa7.18□□□□□ -1.26
RFC4-211ENST00000460408 EPS8L1Q8TE68 723 aa7.18□□□□□ -1.26
RFC4-211ENST00000460408 AP1G2O75843 785 aa7.17□□□□□ -1.26
RFC4-211ENST00000460408 CELA2BP08218 269 aaPredicted RBP7.17□□□□□ -1.26
RFC4-211ENST00000460408 RNF144AP50876 292 aaPredicted RBP7.17□□□□□ -1.26
RFC4-211ENST00000460408 RAB15P59190 212 aa7.17□□□□□ -1.26
RFC4-211ENST00000460408 MAP3K10Q02779 954 aa7.17□□□□□ -1.26
RFC4-211ENST00000460408 DZIP3Q86Y13 1208 aaKnown RBP7.17□□□□□ -1.26
RFC4-211ENST00000460408 GOPCQ9HD26 462 aa7.17□□□□□ -1.26
RFC4-211ENST00000460408 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
RFC4-211ENST00000460408 GMCL1Q96IK5 515 aa7.16□□□□□ -1.26
RFC4-211ENST00000460408 HMX1Q9NP08 348 aaPredicted RBP7.16□□□□□ -1.26
RFC4-211ENST00000460408 TRIM22Q8IYM9 498 aa7.15□□□□□ -1.26
RFC4-211ENST00000460408 ENAMQ9NRM1 1142 aa7.15□□□□□ -1.26
RFC4-211ENST00000460408 TIMELESSQ9UNS1 1208 aa7.15□□□□□ -1.26
RFC4-211ENST00000460408 USP17L8P0C7I0 530 aa7.14□□□□□ -1.27
RFC4-211ENST00000460408 TRIM52Q96A61 297 aa7.14□□□□□ -1.27
RFC4-211ENST00000460408 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
RFC4-211ENST00000460408 MBIPQ9NS73 344 aa7.14□□□□□ -1.27
RFC4-211ENST00000460408 GPC1P35052 558 aa7.13□□□□□ -1.27
RFC4-211ENST00000460408 PRICKLE2Q7Z3G6 844 aa7.13□□□□□ -1.27
RFC4-211ENST00000460408 CYLDQ9NQC7 956 aa7.13□□□□□ -1.27
RFC4-211ENST00000460408 RHOQP17081 205 aa7.12□□□□□ -1.27
RFC4-211ENST00000460408 IGF1RP08069 1367 aa7.11□□□□□ -1.27
RFC4-211ENST00000460408 PHF20L1A8MW92 1017 aa7.11□□□□□ -1.27
RFC4-211ENST00000460408 ATP5J2-PTCD1G3V325 749 aa7.11□□□□□ -1.27
RFC4-211ENST00000460408 DBN1Q16643 649 aa7.11□□□□□ -1.27
RFC4-211ENST00000460408 FOXR1Q6PIV2 292 aa7.11□□□□□ -1.27
RFC4-211ENST00000460408 ATP1B4Q9UN42 357 aaPredicted RBP7.11□□□□□ -1.27
RFC4-211ENST00000460408 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
RFC4-211ENST00000460408 DCAF5Q96JK2 942 aa7.1□□□□□ -1.27
RFC4-211ENST00000460408 CNTNAP5Q8WYK1 1306 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 GPR25O00155 361 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 BCRP11274 1271 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 RFC5P40937 340 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 PLA2G4EQ3MJ16 856 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 CCDC125Q86Z20 511 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 BEND7Q8N7W2 519 aaPredicted RBP7.09□□□□□ -1.27
RFC4-211ENST00000460408 TRIM34Q9BYJ4 488 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 LRRC4BQ9NT99 713 aa7.09□□□□□ -1.27
RFC4-211ENST00000460408 A0A1W2PRU2 124 aa7.08□□□□□ -1.28
RFC4-211ENST00000460408 H7C1W4 665 aa7.08□□□□□ -1.28
RFC4-211ENST00000460408 MSTNO14793 375 aa7.08□□□□□ -1.28
RFC4-211ENST00000460408 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
RFC4-211ENST00000460408 RIPOR1Q6ZS17 1223 aa7.08□□□□□ -1.28
RFC4-211ENST00000460408 ZBBXA8MT70 800 aa7.07□□□□□ -1.28
RFC4-211ENST00000460408 MEN1O00255 615 aa7.07□□□□□ -1.28
RFC4-211ENST00000460408 ITGB2P05107 769 aa7.07□□□□□ -1.28
RFC4-211ENST00000460408 ERVK-9P63128 1117 aa7.07□□□□□ -1.28
RFC4-211ENST00000460408 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
RFC4-211ENST00000460408 GTPBP3Q969Y2 492 aaKnown RBP7.07□□□□□ -1.28
RFC4-211ENST00000460408 ACDQ96AP0 544 aa7.07□□□□□ -1.28
RFC4-211ENST00000460408 GRIP2Q9C0E4 1043 aa7.07□□□□□ -1.28
RFC4-211ENST00000460408 POU4F2Q12837 409 aa7.06□□□□□ -1.28
RFC4-211ENST00000460408 CC2D2BQ6DHV5 1058 aa7.06□□□□□ -1.28
RFC4-211ENST00000460408 PODNQ7Z5L7 613 aa7.06□□□□□ -1.28
RFC4-211ENST00000460408 NEDD1Q8NHV4 660 aa7.06□□□□□ -1.28
RFC4-211ENST00000460408 PCMTD1Q96MG8 357 aaPredicted RBP7.06□□□□□ -1.28
RFC4-211ENST00000460408 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
RFC4-211ENST00000460408 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
RFC4-211ENST00000460408 SPATA31C2B4DYI2 1134 aa7.05□□□□□ -1.28
RFC4-211ENST00000460408 ADAM23O75077 832 aa7.05□□□□□ -1.28
RFC4-211ENST00000460408 WDR44Q5JSH3 913 aa7.05□□□□□ -1.28
RFC4-211ENST00000460408 NBPF10Q6P3W6 841 aaKnown RBP7.05□□□□□ -1.28
RFC4-211ENST00000460408 NBPF15Q8N660 670 aa7.05□□□□□ -1.28
RFC4-211ENST00000460408 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
RFC4-211ENST00000460408 PCDHB9Q9Y5E1 797 aa7.05□□□□□ -1.28
RFC4-211ENST00000460408 PROCP04070 461 aa7.04□□□□□ -1.28
RFC4-211ENST00000460408 CLN3Q13286 438 aa7.04□□□□□ -1.28
RFC4-211ENST00000460408 SLC27A3Q5K4L6 730 aa7.04□□□□□ -1.28
RFC4-211ENST00000460408 RNF20Q5VTR2 975 aa7.04□□□□□ -1.28
RFC4-211ENST00000460408 NLRP3Q96P20 1036 aa7.04□□□□□ -1.28
RFC4-211ENST00000460408 OIP5O43482 229 aa7.03□□□□□ -1.28
RFC4-211ENST00000460408 FBXO45P0C2W1 286 aa7.03□□□□□ -1.28
RFC4-211ENST00000460408 MX2P20592 715 aa7.03□□□□□ -1.28
RFC4-211ENST00000460408 TMEM259Q4ZIN3 620 aa7.03□□□□□ -1.28
RFC4-211ENST00000460408 CYP2U1Q7Z449 544 aa7.03□□□□□ -1.28
RFC4-211ENST00000460408 C14orf37Q86TY3 774 aa7.03□□□□□ -1.28
RFC4-211ENST00000460408 GJD4Q96KN9 370 aaPredicted RBP7.03□□□□□ -1.28
RFC4-211ENST00000460408 NSFL1CQ9UNZ2 370 aaKnown RBP7.03□□□□□ -1.28
RFC4-211ENST00000460408 TRAK2O60296 914 aa7.02□□□□□ -1.29
RFC4-211ENST00000460408 F11P03951 625 aa7.02□□□□□ -1.29
RFC4-211ENST00000460408 MCCD1P59942 119 aaPredicted RBP7.02□□□□□ -1.29
RFC4-211ENST00000460408 NUCKS1Q9H1E3 243 aaKnown RBP7.02□□□□□ -1.29
RFC4-211ENST00000460408 SCTRP47872 440 aa7.01□□□□□ -1.29
RFC4-211ENST00000460408 XP32Q5T750 250 aa7.01□□□□□ -1.29
RFC4-211ENST00000460408 TAS1R3Q7RTX0 852 aa7.01□□□□□ -1.29
RFC4-211ENST00000460408 CFHR5Q9BXR6 569 aa7.01□□□□□ -1.29
RFC4-211ENST00000460408 TIMMDC1Q9NPL8 285 aa7.01□□□□□ -1.29
RFC4-211ENST00000460408 WASLO00401 505 aaPredicted RBP7□□□□□ -1.29
RFC4-211ENST00000460408 MAP2K3P46734 347 aa7□□□□□ -1.29
RFC4-211ENST00000460408 OXCT2Q9BYC2 517 aaPredicted RBP7□□□□□ -1.29
RFC4-211ENST00000460408 OSBPL3Q9H4L5 887 aa7□□□□□ -1.29
RFC4-211ENST00000460408 THBS1P07996 1170 aa6.99□□□□□ -1.29
RFC4-211ENST00000460408 ZNF592Q92610 1267 aa6.99□□□□□ -1.29
RFC4-211ENST00000460408 ARHGEF10LQ9HCE6 1279 aa6.99□□□□□ -1.29
RFC4-211ENST00000460408 SNRPNP63162 240 aaKnown RBP6.98□□□□□ -1.29
RFC4-211ENST00000460408 NR1H3Q13133 447 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms