RNA–Protein interactions for RNA: ENST00000460174.1

SLC19A1-206, Transcript of solute carrier family 19 member 1, humanhuman

TSL 3

Gene SLC19A1, Length 600 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-206ENST00000460174 TNS2Q63HR2 1409 aa18.38■□□□□ 0.53
SLC19A1-206ENST00000460174 SEPT12Q8IYM1 358 aa18.37■□□□□ 0.53
SLC19A1-206ENST00000460174 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
SLC19A1-206ENST00000460174 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
SLC19A1-206ENST00000460174 DDB1Q16531 1140 aa18.36■□□□□ 0.53
SLC19A1-206ENST00000460174 PLEKHG2Q9H7P9 1386 aa18.35■□□□□ 0.53
SLC19A1-206ENST00000460174 FCHSD2O94868 740 aa18.35■□□□□ 0.53
SLC19A1-206ENST00000460174 NEFMP07197 916 aa18.35■□□□□ 0.53
SLC19A1-206ENST00000460174 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
SLC19A1-206ENST00000460174 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
SLC19A1-206ENST00000460174 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
SLC19A1-206ENST00000460174 ADAMTS8Q9UP79 889 aa18.34■□□□□ 0.53
SLC19A1-206ENST00000460174 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
SLC19A1-206ENST00000460174 PKD1L3Q7Z443 1732 aa18.34■□□□□ 0.53
SLC19A1-206ENST00000460174 EXOC5O00471 708 aa18.33■□□□□ 0.52
SLC19A1-206ENST00000460174 PDE3BQ13370 1112 aa18.33■□□□□ 0.52
SLC19A1-206ENST00000460174 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
SLC19A1-206ENST00000460174 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.52
SLC19A1-206ENST00000460174 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
SLC19A1-206ENST00000460174 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
SLC19A1-206ENST00000460174 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
SLC19A1-206ENST00000460174 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
SLC19A1-206ENST00000460174 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
SLC19A1-206ENST00000460174 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
SLC19A1-206ENST00000460174 ZNF530Q6P9A1 599 aaPredicted RBP18.3■□□□□ 0.52
SLC19A1-206ENST00000460174 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
SLC19A1-206ENST00000460174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.52
SLC19A1-206ENST00000460174 SHANK3Q9BYB0 1731 aa18.29■□□□□ 0.52
SLC19A1-206ENST00000460174 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
SLC19A1-206ENST00000460174 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
SLC19A1-206ENST00000460174 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
SLC19A1-206ENST00000460174 RUNDC1Q96C34 613 aa18.28■□□□□ 0.52
SLC19A1-206ENST00000460174 BRWD3Q6RI45 1802 aa18.28■□□□□ 0.52
SLC19A1-206ENST00000460174 MTHFSDQ2M296 383 aaKnown RBP18.27■□□□□ 0.52
SLC19A1-206ENST00000460174 PHACTR3Q96KR7 559 aa18.27■□□□□ 0.52
SLC19A1-206ENST00000460174 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
SLC19A1-206ENST00000460174 CYP27B1O15528 508 aa18.25■□□□□ 0.51
SLC19A1-206ENST00000460174 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
SLC19A1-206ENST00000460174 MARCH10Q8NA82 808 aaPredicted RBP18.25■□□□□ 0.51
SLC19A1-206ENST00000460174 PHKG2P15735 406 aa18.24■□□□□ 0.51
SLC19A1-206ENST00000460174 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
SLC19A1-206ENST00000460174 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
SLC19A1-206ENST00000460174 AKAP4Q5JQC9 854 aa18.23■□□□□ 0.51
SLC19A1-206ENST00000460174 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
SLC19A1-206ENST00000460174 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
SLC19A1-206ENST00000460174 EP400Q96L91 3159 aa18.22■□□□□ 0.51
SLC19A1-206ENST00000460174 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
SLC19A1-206ENST00000460174 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
SLC19A1-206ENST00000460174 APAF1O14727 1248 aa18.2■□□□□ 0.5
SLC19A1-206ENST00000460174 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
SLC19A1-206ENST00000460174 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
SLC19A1-206ENST00000460174 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
SLC19A1-206ENST00000460174 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
SLC19A1-206ENST00000460174 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
SLC19A1-206ENST00000460174 FAM196AQ6ZSG2 479 aa18.19■□□□□ 0.5
SLC19A1-206ENST00000460174 RTF1Q92541 710 aaKnown RBP18.19■□□□□ 0.5
SLC19A1-206ENST00000460174 DCAF5Q96JK2 942 aa18.19■□□□□ 0.5
SLC19A1-206ENST00000460174 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
SLC19A1-206ENST00000460174 RIPK4P57078 832 aa18.18■□□□□ 0.5
SLC19A1-206ENST00000460174 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
SLC19A1-206ENST00000460174 NKX1-1Q15270 411 aaPredicted RBP18.18■□□□□ 0.5
SLC19A1-206ENST00000460174 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
SLC19A1-206ENST00000460174 BCL9O00512 1426 aa18.17■□□□□ 0.5
SLC19A1-206ENST00000460174 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
SLC19A1-206ENST00000460174 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
SLC19A1-206ENST00000460174 NHSQ6T4R5 1651 aa18.15■□□□□ 0.5
SLC19A1-206ENST00000460174 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
SLC19A1-206ENST00000460174 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.49
SLC19A1-206ENST00000460174 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
SLC19A1-206ENST00000460174 MCM10Q7L590 875 aa18.14■□□□□ 0.49
SLC19A1-206ENST00000460174 DLG5Q8TDM6 1919 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 SCN11AQ9UI33 1791 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 CABP4P57796 275 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 DCTN1Q14203 1278 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 LGR6Q9HBX8 967 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 TMOD3Q9NYL9 352 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 SALL2Q9Y467 1007 aaPredicted RBP18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 MRC1P22897 1456 aa18.13■□□□□ 0.49
SLC19A1-206ENST00000460174 ERVV-2B6SEH9 535 aa18.12■□□□□ 0.49
SLC19A1-206ENST00000460174 TRIM37O94972 964 aa18.12■□□□□ 0.49
SLC19A1-206ENST00000460174 PRIM1P49642 420 aaKnown RBP18.12■□□□□ 0.49
SLC19A1-206ENST00000460174 TEFQ10587 303 aa18.12■□□□□ 0.49
SLC19A1-206ENST00000460174 KCNQ2O43526 872 aa18.11■□□□□ 0.49
SLC19A1-206ENST00000460174 IL17REQ8NFR9 667 aa18.11■□□□□ 0.49
SLC19A1-206ENST00000460174 THUMPD2Q9BTF0 503 aaKnown RBP18.11■□□□□ 0.49
SLC19A1-206ENST00000460174 CEMIPQ8WUJ3 1361 aa18.11■□□□□ 0.49
SLC19A1-206ENST00000460174 SLC52A2Q9HAB3 445 aa18.1■□□□□ 0.49
SLC19A1-206ENST00000460174 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
SLC19A1-206ENST00000460174 SBF2Q86WG5 1849 aa18.09■□□□□ 0.49
SLC19A1-206ENST00000460174 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
SLC19A1-206ENST00000460174 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
SLC19A1-206ENST00000460174 HNRNPUQ00839 825 aaKnown RBP eCLIP18.08■□□□□ 0.48
SLC19A1-206ENST00000460174 SF3B2Q13435 895 aaKnown RBP18.08■□□□□ 0.48
SLC19A1-206ENST00000460174 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
SLC19A1-206ENST00000460174 ITGB4P16144 1822 aa18.07■□□□□ 0.48
SLC19A1-206ENST00000460174 TNS1Q9HBL0 1735 aaKnown RBP18.07■□□□□ 0.48
SLC19A1-206ENST00000460174 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
SLC19A1-206ENST00000460174 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
SLC19A1-206ENST00000460174 PTF1AQ7RTS3 328 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms