RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
CCDC66-209ENST00000459746 C6orf118Q5T5N4 469 aa11.51□□□□□ -0.57
CCDC66-209ENST00000459746 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
CCDC66-209ENST00000459746 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
CCDC66-209ENST00000459746 POTECB2RU33 542 aa11.49□□□□□ -0.57
CCDC66-209ENST00000459746 GNRH1P01148 92 aa11.49□□□□□ -0.57
CCDC66-209ENST00000459746 SCTRP47872 440 aa11.49□□□□□ -0.57
CCDC66-209ENST00000459746 RELBQ01201 579 aa11.49□□□□□ -0.57
CCDC66-209ENST00000459746 AGBL1Q96MI9 1066 aa11.49□□□□□ -0.57
CCDC66-209ENST00000459746 OSBPL3Q9H4L5 887 aa11.49□□□□□ -0.57
CCDC66-209ENST00000459746 ZNF777Q9ULD5 760 aaPredicted RBP11.49□□□□□ -0.57
CCDC66-209ENST00000459746 EML3Q32P44 896 aa11.48□□□□□ -0.57
CCDC66-209ENST00000459746 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
CCDC66-209ENST00000459746 PIK3CDO00329 1044 aa11.47□□□□□ -0.57
CCDC66-209ENST00000459746 ATP9BO43861 1147 aa11.47□□□□□ -0.57
CCDC66-209ENST00000459746 PLEKHM2Q8IWE5 1019 aa11.47□□□□□ -0.57
CCDC66-209ENST00000459746 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
CCDC66-209ENST00000459746 SOS2Q07890 1332 aaPredicted RBP11.46□□□□□ -0.57
CCDC66-209ENST00000459746 ZNF395Q9H8N7 513 aaPredicted RBP11.46□□□□□ -0.57
CCDC66-209ENST00000459746 NOD1Q9Y239 953 aa11.46□□□□□ -0.57
CCDC66-209ENST00000459746 TTLL8A6PVC2 850 aa11.45□□□□□ -0.58
CCDC66-209ENST00000459746 USP17L5A8MUK1 530 aa11.45□□□□□ -0.58
CCDC66-209ENST00000459746 SNRPBP14678 240 aaKnown RBP11.45□□□□□ -0.58
CCDC66-209ENST00000459746 UCN2Q96RP3 112 aa11.45□□□□□ -0.58
CCDC66-209ENST00000459746 A0A1W2PRU2 124 aa11.44□□□□□ -0.58
CCDC66-209ENST00000459746 MAN1A2O60476 641 aa11.44□□□□□ -0.58
CCDC66-209ENST00000459746 GPC1P35052 558 aa11.44□□□□□ -0.58
CCDC66-209ENST00000459746 ESCO1Q5FWF5 840 aa11.44□□□□□ -0.58
CCDC66-209ENST00000459746 TBC1D9Q6ZT07 1266 aa11.44□□□□□ -0.58
CCDC66-209ENST00000459746 CLN3Q13286 438 aa11.43□□□□□ -0.58
CCDC66-209ENST00000459746 TRIM50Q86XT4 487 aa11.43□□□□□ -0.58
CCDC66-209ENST00000459746 NLRP3Q96P20 1036 aa11.43□□□□□ -0.58
CCDC66-209ENST00000459746 INSM2Q96T92 566 aaPredicted RBP11.43□□□□□ -0.58
CCDC66-209ENST00000459746 RNF144AP50876 292 aaPredicted RBP11.42□□□□□ -0.58
CCDC66-209ENST00000459746 NCOA4Q13772 614 aa11.42□□□□□ -0.58
CCDC66-209ENST00000459746 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.42□□□□□ -0.58
CCDC66-209ENST00000459746 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
CCDC66-209ENST00000459746 POLMQ9NP87 494 aaPredicted RBP11.42□□□□□ -0.58
CCDC66-209ENST00000459746 TFIP11Q9UBB9 837 aaKnown RBP11.42□□□□□ -0.58
CCDC66-209ENST00000459746 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
CCDC66-209ENST00000459746 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
CCDC66-209ENST00000459746 PALM3A6NDB9 673 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-209ENST00000459746 CTSOP43234 321 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-209ENST00000459746 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
CCDC66-209ENST00000459746 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
CCDC66-209ENST00000459746 ESYT1Q9BSJ8 1104 aa11.4□□□□□ -0.58
CCDC66-209ENST00000459746 MEN1O00255 615 aa11.39□□□□□ -0.59
CCDC66-209ENST00000459746 ATP1A2P50993 1020 aa11.39□□□□□ -0.59
CCDC66-209ENST00000459746 XAGE2Q96GT9 111 aa11.39□□□□□ -0.59
CCDC66-209ENST00000459746 ARHGEF10LQ9HCE6 1279 aa11.39□□□□□ -0.59
CCDC66-209ENST00000459746 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
CCDC66-209ENST00000459746 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
CCDC66-209ENST00000459746 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
CCDC66-209ENST00000459746 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
CCDC66-209ENST00000459746 DEPDC4Q8N2C3 294 aa11.37□□□□□ -0.59
CCDC66-209ENST00000459746 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
CCDC66-209ENST00000459746 DNMT3LQ9UJW3 386 aa11.37□□□□□ -0.59
CCDC66-209ENST00000459746 FIGNL2A6NMB9 653 aa11.36□□□□□ -0.59
CCDC66-209ENST00000459746 GTF2IP78347 998 aa11.36□□□□□ -0.59
CCDC66-209ENST00000459746 NPAS3Q8IXF0 933 aa11.36□□□□□ -0.59
CCDC66-209ENST00000459746 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
CCDC66-209ENST00000459746 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
CCDC66-209ENST00000459746 LYSMD3Q7Z3D4 306 aa11.35□□□□□ -0.59
CCDC66-209ENST00000459746 GRIP2Q9C0E4 1043 aa11.35□□□□□ -0.59
CCDC66-209ENST00000459746 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
CCDC66-209ENST00000459746 INHAP05111 366 aa11.34□□□□□ -0.59
CCDC66-209ENST00000459746 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
CCDC66-209ENST00000459746 CENPCQ03188 943 aa11.34□□□□□ -0.59
CCDC66-209ENST00000459746 FOXD4L5Q5VV16 416 aaPredicted RBP11.34□□□□□ -0.59
CCDC66-209ENST00000459746 LARGE2Q8N3Y3 721 aa11.34□□□□□ -0.59
CCDC66-209ENST00000459746 ETNK1Q9HBU6 452 aa11.34□□□□□ -0.59
CCDC66-209ENST00000459746 HRH3Q9Y5N1 445 aa11.34□□□□□ -0.59
CCDC66-209ENST00000459746 BACH1O14867 736 aa11.33□□□□□ -0.6
CCDC66-209ENST00000459746 IL2RAP01589 272 aa11.33□□□□□ -0.6
CCDC66-209ENST00000459746 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
CCDC66-209ENST00000459746 GDF10P55107 478 aa11.33□□□□□ -0.6
CCDC66-209ENST00000459746 WDR44Q5JSH3 913 aa11.33□□□□□ -0.6
CCDC66-209ENST00000459746 NXF1Q9UBU9 619 aaKnown RBP11.33□□□□□ -0.6
CCDC66-209ENST00000459746 SCNN1DP51172 638 aa11.32□□□□□ -0.6
CCDC66-209ENST00000459746 PSME1Q06323 249 aa11.32□□□□□ -0.6
CCDC66-209ENST00000459746 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
CCDC66-209ENST00000459746 VRTNQ9H8Y1 702 aa11.32□□□□□ -0.6
CCDC66-209ENST00000459746 RAB6BQ9NRW1 208 aa11.32□□□□□ -0.6
CCDC66-209ENST00000459746 DNAAF2Q9NVR5 837 aaKnown RBP11.32□□□□□ -0.6
CCDC66-209ENST00000459746 RBM19Q9Y4C8 960 aaKnown RBP11.32□□□□□ -0.6
CCDC66-209ENST00000459746 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
CCDC66-209ENST00000459746 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
CCDC66-209ENST00000459746 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
CCDC66-209ENST00000459746 LARP1Q6PKG0 1096 aaKnown RBP11.3□□□□□ -0.6
CCDC66-209ENST00000459746 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
CCDC66-209ENST00000459746 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
CCDC66-209ENST00000459746 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
CCDC66-209ENST00000459746 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
CCDC66-209ENST00000459746 RASA1P20936 1047 aa11.29□□□□□ -0.6
CCDC66-209ENST00000459746 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
CCDC66-209ENST00000459746 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
CCDC66-209ENST00000459746 PRICKLE2Q7Z3G6 844 aa11.29□□□□□ -0.6
CCDC66-209ENST00000459746 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
CCDC66-209ENST00000459746 TMEM229AB2RXF0 380 aa11.28□□□□□ -0.6
CCDC66-209ENST00000459746 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms