RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 AEBP2Q6ZN18 517 aaPredicted RBP31.31■■■□□ 2.6
CCDC66-209ENST00000459746 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
CCDC66-209ENST00000459746 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
CCDC66-209ENST00000459746 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
CCDC66-209ENST00000459746 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
CCDC66-209ENST00000459746 FOXD1Q16676 465 aa24.72■■□□□ 1.55
CCDC66-209ENST00000459746 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
CCDC66-209ENST00000459746 ADRA2BP18089 450 aa23.69■■□□□ 1.38
CCDC66-209ENST00000459746 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
CCDC66-209ENST00000459746 MSH5O43196 834 aa22.94■■□□□ 1.26
CCDC66-209ENST00000459746 POTEDQ86YR6 584 aa22.36■■□□□ 1.17
CCDC66-209ENST00000459746 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
CCDC66-209ENST00000459746 PPP4R3CPQ6ZMV5 832 aa21.9■■□□□ 1.1
CCDC66-209ENST00000459746 MAPK8IP2Q13387 824 aaPredicted RBP21.49■■□□□ 1.03
CCDC66-209ENST00000459746 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
CCDC66-209ENST00000459746 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
CCDC66-209ENST00000459746 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
CCDC66-209ENST00000459746 KCNA4P22459 653 aa21.27■■□□□ 1
CCDC66-209ENST00000459746 NPM3O75607 178 aaKnown RBP20.97■□□□□ 0.95
CCDC66-209ENST00000459746 RNF216Q9NWF9 866 aaPredicted RBP20.96■□□□□ 0.95
CCDC66-209ENST00000459746 HOXD11P31277 338 aaPredicted RBP20.86■□□□□ 0.93
CCDC66-209ENST00000459746 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
CCDC66-209ENST00000459746 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
CCDC66-209ENST00000459746 SLC4A1APQ9BWU0 796 aaKnown RBP20.32■□□□□ 0.84
CCDC66-209ENST00000459746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC66-209ENST00000459746 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
CCDC66-209ENST00000459746 FOXD4L1Q9NU39 408 aa19.67■□□□□ 0.74
CCDC66-209ENST00000459746 CACNB1Q02641 598 aaPredicted RBP19.59■□□□□ 0.73
CCDC66-209ENST00000459746 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
CCDC66-209ENST00000459746 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
CCDC66-209ENST00000459746 ZBTB22O15209 634 aa19.52■□□□□ 0.72
CCDC66-209ENST00000459746 U3KPZ7 1027 aaPredicted RBP19.48■□□□□ 0.71
CCDC66-209ENST00000459746 MYCNP04198 464 aaPredicted RBP19.45■□□□□ 0.7
CCDC66-209ENST00000459746 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
CCDC66-209ENST00000459746 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
CCDC66-209ENST00000459746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
CCDC66-209ENST00000459746 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
CCDC66-209ENST00000459746 SAMD1Q6SPF0 538 aaPredicted RBP19.29■□□□□ 0.68
CCDC66-209ENST00000459746 APLP2Q06481 763 aa19.25■□□□□ 0.67
CCDC66-209ENST00000459746 ATXN8OSP0DMR3 200 aa19.1■□□□□ 0.65
CCDC66-209ENST00000459746 CAPN15O75808 1086 aa18.91■□□□□ 0.62
CCDC66-209ENST00000459746 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
CCDC66-209ENST00000459746 ZNF219Q9P2Y4 722 aaPredicted RBP18.89■□□□□ 0.61
CCDC66-209ENST00000459746 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
CCDC66-209ENST00000459746 ATF5Q9Y2D1 282 aaPredicted RBP18.79■□□□□ 0.6
CCDC66-209ENST00000459746 DSG3P32926 999 aa18.6■□□□□ 0.57
CCDC66-209ENST00000459746 POLA2Q14181 598 aa18.51■□□□□ 0.55
CCDC66-209ENST00000459746 ABCB7O75027 752 aa18.47■□□□□ 0.55
CCDC66-209ENST00000459746 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.52
CCDC66-209ENST00000459746 FBLN2P98095 1184 aa18.19■□□□□ 0.5
CCDC66-209ENST00000459746 MKRN4PQ13434 485 aaPredicted RBP18■□□□□ 0.47
CCDC66-209ENST00000459746 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
CCDC66-209ENST00000459746 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
CCDC66-209ENST00000459746 SPDYE2BA6NHP3 402 aa17.77■□□□□ 0.44
CCDC66-209ENST00000459746 SPDYE6P0CI01 402 aa17.77■□□□□ 0.44
CCDC66-209ENST00000459746 SPDYE2Q495Y8 402 aa17.77■□□□□ 0.44
CCDC66-209ENST00000459746 ZNF692Q9BU19 519 aaPredicted RBP17.67■□□□□ 0.42
CCDC66-209ENST00000459746 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
CCDC66-209ENST00000459746 AKT1S1Q96B36 256 aa17.59■□□□□ 0.41
CCDC66-209ENST00000459746 FKBP8Q14318 412 aa17.58■□□□□ 0.4
CCDC66-209ENST00000459746 SSUH2Q9Y2M2 353 aa17.58■□□□□ 0.4
CCDC66-209ENST00000459746 POTEHQ6S545 545 aa17.52■□□□□ 0.4
CCDC66-209ENST00000459746 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCDC66-209ENST00000459746 PROM2Q8N271 834 aa17.37■□□□□ 0.37
CCDC66-209ENST00000459746 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
CCDC66-209ENST00000459746 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.36
CCDC66-209ENST00000459746 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
CCDC66-209ENST00000459746 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
CCDC66-209ENST00000459746 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
CCDC66-209ENST00000459746 CLEC11AQ9Y240 323 aa17.1■□□□□ 0.33
CCDC66-209ENST00000459746 CHRDL2Q6WN34 429 aa17.04■□□□□ 0.32
CCDC66-209ENST00000459746 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
CCDC66-209ENST00000459746 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
CCDC66-209ENST00000459746 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
CCDC66-209ENST00000459746 MIER1Q8N108 512 aa16.79■□□□□ 0.28
CCDC66-209ENST00000459746 VASPP50552 380 aaPredicted RBP16.77■□□□□ 0.28
CCDC66-209ENST00000459746 PIP4P2Q8N4L2 257 aa16.77■□□□□ 0.28
CCDC66-209ENST00000459746 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
CCDC66-209ENST00000459746 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
CCDC66-209ENST00000459746 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
CCDC66-209ENST00000459746 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
CCDC66-209ENST00000459746 CHADLQ6NUI6 762 aa16.62■□□□□ 0.25
CCDC66-209ENST00000459746 FARP1Q9Y4F1 1045 aaPredicted RBP16.57■□□□□ 0.24
CCDC66-209ENST00000459746 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC66-209ENST00000459746 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
CCDC66-209ENST00000459746 MNX1P50219 401 aaPredicted RBP16.52■□□□□ 0.24
CCDC66-209ENST00000459746 IFNLR1Q8IU57 520 aaPredicted RBP16.51■□□□□ 0.23
CCDC66-209ENST00000459746 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
CCDC66-209ENST00000459746 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
CCDC66-209ENST00000459746 NUBP1P53384 320 aa16.31■□□□□ 0.2
CCDC66-209ENST00000459746 HAX1O00165 279 aa16.29■□□□□ 0.2
CCDC66-209ENST00000459746 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
CCDC66-209ENST00000459746 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
CCDC66-209ENST00000459746 FAM212AQ96EL1 285 aa16.24■□□□□ 0.19
CCDC66-209ENST00000459746 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
CCDC66-209ENST00000459746 GSE1Q14687 1217 aa16.22■□□□□ 0.19
CCDC66-209ENST00000459746 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
CCDC66-209ENST00000459746 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
CCDC66-209ENST00000459746 TSPYL2Q9H2G4 693 aaPredicted RBP16.15■□□□□ 0.18
CCDC66-209ENST00000459746 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms