RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
PCCA-208ENST00000458283 PNISRQ8TF01 805 aaKnown RBP13.7□□□□□ -0.22
PCCA-208ENST00000458283 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
PCCA-208ENST00000458283 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
PCCA-208ENST00000458283 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCCA-208ENST00000458283 EZH2Q15910 746 aaKnown RBP13.69□□□□□ -0.22
PCCA-208ENST00000458283 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
PCCA-208ENST00000458283 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
PCCA-208ENST00000458283 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
PCCA-208ENST00000458283 PARP4Q9UKK3 1724 aaKnown RBP13.69□□□□□ -0.22
PCCA-208ENST00000458283 CPDO75976 1380 aa13.69□□□□□ -0.22
PCCA-208ENST00000458283 INSRP06213 1382 aa13.69□□□□□ -0.22
PCCA-208ENST00000458283 COL18A1P39060 1754 aa13.68□□□□□ -0.22
PCCA-208ENST00000458283 APBA3O96018 575 aa13.68□□□□□ -0.22
PCCA-208ENST00000458283 LARP1Q6PKG0 1096 aaKnown RBP13.68□□□□□ -0.22
PCCA-208ENST00000458283 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
PCCA-208ENST00000458283 TCP11L2Q8N4U5 519 aa13.68□□□□□ -0.22
PCCA-208ENST00000458283 IP6K1Q92551 441 aa13.68□□□□□ -0.22
PCCA-208ENST00000458283 KIF24Q5T7B8 1368 aa13.68□□□□□ -0.22
PCCA-208ENST00000458283 HMOX1P09601 288 aa13.67□□□□□ -0.22
PCCA-208ENST00000458283 IL13P35225 146 aa13.67□□□□□ -0.22
PCCA-208ENST00000458283 USHBP1Q8N6Y0 703 aa13.67□□□□□ -0.22
PCCA-208ENST00000458283 ADAMTS8Q9UP79 889 aa13.67□□□□□ -0.22
PCCA-208ENST00000458283 ABCC6O95255 1503 aa13.67□□□□□ -0.22
PCCA-208ENST00000458283 RGPD2P0DJD1 1756 aa13.67□□□□□ -0.22
PCCA-208ENST00000458283 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
PCCA-208ENST00000458283 CSB-PGBD3P0DP91 1061 aa13.66□□□□□ -0.22
PCCA-208ENST00000458283 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
PCCA-208ENST00000458283 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
PCCA-208ENST00000458283 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
PCCA-208ENST00000458283 WNK3Q9BYP7 1800 aa13.65□□□□□ -0.22
PCCA-208ENST00000458283 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCCA-208ENST00000458283 AXIN2Q9Y2T1 843 aa13.65□□□□□ -0.22
PCCA-208ENST00000458283 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
PCCA-208ENST00000458283 AEBP1Q8IUX7 1158 aa13.64□□□□□ -0.23
PCCA-208ENST00000458283 THRAP3Q9Y2W1 955 aaKnown RBP13.64□□□□□ -0.23
PCCA-208ENST00000458283 CRB1P82279 1406 aa13.64□□□□□ -0.23
PCCA-208ENST00000458283 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
PCCA-208ENST00000458283 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
PCCA-208ENST00000458283 ERBB3P21860 1342 aa13.63□□□□□ -0.23
PCCA-208ENST00000458283 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
PCCA-208ENST00000458283 CAPN15O75808 1086 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 EYA1Q99502 592 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 SALL2Q9Y467 1007 aaPredicted RBP13.62□□□□□ -0.23
PCCA-208ENST00000458283 RGPD3A6NKT7 1758 aaPredicted RBP13.62□□□□□ -0.23
PCCA-208ENST00000458283 RGPD4Q7Z3J3 1758 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 OVOS2A0A0G2JMS6 1433 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 IGSF1Q8N6C5 1336 aa13.62□□□□□ -0.23
PCCA-208ENST00000458283 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
PCCA-208ENST00000458283 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
PCCA-208ENST00000458283 RRP7AQ9Y3A4 280 aaKnown RBP13.6□□□□□ -0.23
PCCA-208ENST00000458283 NBPF6Q5VWK0 638 aa13.59□□□□□ -0.23
PCCA-208ENST00000458283 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
PCCA-208ENST00000458283 NBPF4Q96M43 638 aa13.59□□□□□ -0.23
PCCA-208ENST00000458283 DDB1Q16531 1140 aa13.58□□□□□ -0.24
PCCA-208ENST00000458283 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
PCCA-208ENST00000458283 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
PCCA-208ENST00000458283 PPP1R1BQ9UD71 204 aaPredicted RBP13.58□□□□□ -0.24
PCCA-208ENST00000458283 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
PCCA-208ENST00000458283 APAF1O14727 1248 aa13.57□□□□□ -0.24
PCCA-208ENST00000458283 NEFMP07197 916 aa13.57□□□□□ -0.24
PCCA-208ENST00000458283 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
PCCA-208ENST00000458283 MEGF6O75095 1541 aa13.55□□□□□ -0.24
PCCA-208ENST00000458283 FCHSD2O94868 740 aa13.55□□□□□ -0.24
PCCA-208ENST00000458283 KDRP35968 1356 aa13.55□□□□□ -0.24
PCCA-208ENST00000458283 NCAPD2Q15021 1401 aa13.55□□□□□ -0.24
PCCA-208ENST00000458283 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
PCCA-208ENST00000458283 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
PCCA-208ENST00000458283 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
PCCA-208ENST00000458283 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
PCCA-208ENST00000458283 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
PCCA-208ENST00000458283 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
PCCA-208ENST00000458283 KCNQ2O43526 872 aa13.52□□□□□ -0.25
PCCA-208ENST00000458283 RAPGEF4Q8WZA2 1011 aa13.52□□□□□ -0.25
PCCA-208ENST00000458283 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
PCCA-208ENST00000458283 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
PCCA-208ENST00000458283 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
PCCA-208ENST00000458283 PLSCR1O15162 318 aa13.51□□□□□ -0.25
PCCA-208ENST00000458283 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
PCCA-208ENST00000458283 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
PCCA-208ENST00000458283 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
PCCA-208ENST00000458283 TMPOP42166 694 aaKnown RBP13.5□□□□□ -0.25
PCCA-208ENST00000458283 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
PCCA-208ENST00000458283 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
PCCA-208ENST00000458283 BCL9O00512 1426 aa13.49□□□□□ -0.25
PCCA-208ENST00000458283 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
PCCA-208ENST00000458283 YY1P25490 414 aa13.49□□□□□ -0.25
PCCA-208ENST00000458283 RIPK4P57078 832 aa13.49□□□□□ -0.25
PCCA-208ENST00000458283 MTHFSDQ2M296 383 aaKnown RBP13.49□□□□□ -0.25
PCCA-208ENST00000458283 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
PCCA-208ENST00000458283 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
PCCA-208ENST00000458283 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
PCCA-208ENST00000458283 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
PCCA-208ENST00000458283 PTF1AQ7RTS3 328 aa13.48□□□□□ -0.25
PCCA-208ENST00000458283 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
PCCA-208ENST00000458283 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
PCCA-208ENST00000458283 EXOC5O00471 708 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms