RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
CDC42EP3-204ENST00000457889 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
CDC42EP3-204ENST00000457889 ERBB3P21860 1342 aa11.65□□□□□ -0.54
CDC42EP3-204ENST00000457889 SLFN5Q08AF3 891 aa11.65□□□□□ -0.54
CDC42EP3-204ENST00000457889 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
CDC42EP3-204ENST00000457889 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
CDC42EP3-204ENST00000457889 COL18A1P39060 1754 aa11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 CLCN6P51797 869 aa11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 RIPK4P57078 832 aa11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 LMO7Q8WWI1 1683 aa11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 COL16A1Q07092 1604 aaPredicted RBP11.64□□□□□ -0.55
CDC42EP3-204ENST00000457889 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-204ENST00000457889 NEFLP07196 543 aa11.63□□□□□ -0.55
CDC42EP3-204ENST00000457889 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-204ENST00000457889 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-204ENST00000457889 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
CDC42EP3-204ENST00000457889 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
CDC42EP3-204ENST00000457889 PHLPP1O60346 1717 aa11.63□□□□□ -0.55
CDC42EP3-204ENST00000457889 ZC3H6P61129 1189 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-204ENST00000457889 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
CDC42EP3-204ENST00000457889 PHACTR3Q96KR7 559 aa11.62□□□□□ -0.55
CDC42EP3-204ENST00000457889 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
CDC42EP3-204ENST00000457889 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
CDC42EP3-204ENST00000457889 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-204ENST00000457889 UBAP1LF5GYI3 381 aa11.61□□□□□ -0.55
CDC42EP3-204ENST00000457889 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
CDC42EP3-204ENST00000457889 AMOTQ4VCS5 1084 aa11.61□□□□□ -0.55
CDC42EP3-204ENST00000457889 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
CDC42EP3-204ENST00000457889 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
CDC42EP3-204ENST00000457889 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
CDC42EP3-204ENST00000457889 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
CDC42EP3-204ENST00000457889 ERICH6BQ5W0A0 696 aa11.6□□□□□ -0.55
CDC42EP3-204ENST00000457889 LTV1Q96GA3 475 aaPredicted RBP11.6□□□□□ -0.55
CDC42EP3-204ENST00000457889 RCAN3Q9UKA8 241 aa11.6□□□□□ -0.55
CDC42EP3-204ENST00000457889 NBPF6Q5VWK0 638 aa11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 CABLES1Q8TDN4 633 aa11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 NBPF4Q96M43 638 aa11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 IFT57Q9NWB7 429 aa11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 OVOS2A0A0G2JMS6 1433 aa11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 WDR17Q8IZU2 1322 aa11.59□□□□□ -0.55
CDC42EP3-204ENST00000457889 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
CDC42EP3-204ENST00000457889 GNAI1P63096 354 aa11.58□□□□□ -0.56
CDC42EP3-204ENST00000457889 PLEKHO1Q53GL0 409 aaPredicted RBP11.58□□□□□ -0.56
CDC42EP3-204ENST00000457889 RTF1Q92541 710 aaKnown RBP11.58□□□□□ -0.56
CDC42EP3-204ENST00000457889 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
CDC42EP3-204ENST00000457889 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
CDC42EP3-204ENST00000457889 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.56
CDC42EP3-204ENST00000457889 COL5A2P05997 1499 aaPredicted RBP11.57□□□□□ -0.56
CDC42EP3-204ENST00000457889 MAP3K5Q99683 1374 aa11.57□□□□□ -0.56
CDC42EP3-204ENST00000457889 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
CDC42EP3-204ENST00000457889 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
CDC42EP3-204ENST00000457889 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
CDC42EP3-204ENST00000457889 RGPD5Q99666 1765 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 GNAT3A8MTJ3 354 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 CSB-PGBD3P0DP91 1061 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 NLRP2Q9NX02 1062 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 LRRC37A3O60309 1634 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 FANCIQ9NVI1 1328 aa11.56□□□□□ -0.56
CDC42EP3-204ENST00000457889 JCADQ9P266 1359 aa11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 ZNF853P0CG23 659 aa11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 CHRNA2Q15822 529 aa11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
CDC42EP3-204ENST00000457889 RGPD2P0DJD1 1756 aa11.54□□□□□ -0.56
CDC42EP3-204ENST00000457889 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-204ENST00000457889 AKAP4Q5JQC9 854 aa11.54□□□□□ -0.56
CDC42EP3-204ENST00000457889 CRB1P82279 1406 aa11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 PARP4Q9UKK3 1724 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 FAM83GA6ND36 823 aa11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 RRP1P56182 461 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 C1orf141Q5JVX7 400 aa11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 USHBP1Q8N6Y0 703 aa11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 SPATA31A6Q5VVP1 1343 aa11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 CEMIPQ8WUJ3 1361 aa11.53□□□□□ -0.56
CDC42EP3-204ENST00000457889 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
CDC42EP3-204ENST00000457889 ZNF530Q6P9A1 599 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-204ENST00000457889 NWD2Q9ULI1 1742 aa11.52□□□□□ -0.57
CDC42EP3-204ENST00000457889 CHL1O00533 1208 aa11.51□□□□□ -0.57
CDC42EP3-204ENST00000457889 HSP90AB1P08238 724 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-204ENST00000457889 EVA1CP58658 441 aa11.51□□□□□ -0.57
CDC42EP3-204ENST00000457889 TOM1L2Q6ZVM7 507 aa11.51□□□□□ -0.57
CDC42EP3-204ENST00000457889 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
CDC42EP3-204ENST00000457889 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
CDC42EP3-204ENST00000457889 ADAMTS7Q9UKP4 1686 aa11.51□□□□□ -0.57
CDC42EP3-204ENST00000457889 MEGF6O75095 1541 aa11.5□□□□□ -0.57
CDC42EP3-204ENST00000457889 PLCH1Q4KWH8 1693 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms