RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 ADAM23O75077 832 aa8.34□□□□□ -1.07
UBDP1-202ENST00000457888 RHOQP17081 205 aa8.34□□□□□ -1.07
UBDP1-202ENST00000457888 FOXR1Q6PIV2 292 aa8.34□□□□□ -1.07
UBDP1-202ENST00000457888 BEND7Q8N7W2 519 aaPredicted RBP8.34□□□□□ -1.07
UBDP1-202ENST00000457888 PNMA1Q8ND90 353 aa8.34□□□□□ -1.07
UBDP1-202ENST00000457888 SPOCK3Q9BQ16 436 aa8.34□□□□□ -1.07
UBDP1-202ENST00000457888 IGF1RP08069 1367 aa8.34□□□□□ -1.07
UBDP1-202ENST00000457888 GPR25O00155 361 aa8.33□□□□□ -1.08
UBDP1-202ENST00000457888 BCRP11274 1271 aa8.33□□□□□ -1.08
UBDP1-202ENST00000457888 XP32Q5T750 250 aa8.33□□□□□ -1.08
UBDP1-202ENST00000457888 FBXO31Q5XUX0 539 aaPredicted RBP8.33□□□□□ -1.08
UBDP1-202ENST00000457888 PODNQ7Z5L7 613 aa8.33□□□□□ -1.08
UBDP1-202ENST00000457888 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
UBDP1-202ENST00000457888 SKIV2LQ15477 1246 aaKnown RBP8.32□□□□□ -1.08
UBDP1-202ENST00000457888 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
UBDP1-202ENST00000457888 NEDD1Q8NHV4 660 aa8.32□□□□□ -1.08
UBDP1-202ENST00000457888 TRIM52Q96A61 297 aa8.32□□□□□ -1.08
UBDP1-202ENST00000457888 CYLDQ9NQC7 956 aa8.32□□□□□ -1.08
UBDP1-202ENST00000457888 AP1G2O75843 785 aa8.31□□□□□ -1.08
UBDP1-202ENST00000457888 ITGB2P05107 769 aa8.31□□□□□ -1.08
UBDP1-202ENST00000457888 DBN1Q16643 649 aa8.31□□□□□ -1.08
UBDP1-202ENST00000457888 RIPOR1Q6ZS17 1223 aa8.31□□□□□ -1.08
UBDP1-202ENST00000457888 EPS8L1Q8TE68 723 aa8.31□□□□□ -1.08
UBDP1-202ENST00000457888 SEPT12Q8IYM1 358 aa8.3□□□□□ -1.08
UBDP1-202ENST00000457888 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
UBDP1-202ENST00000457888 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
UBDP1-202ENST00000457888 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
UBDP1-202ENST00000457888 GTPBP3Q969Y2 492 aaKnown RBP8.29□□□□□ -1.08
UBDP1-202ENST00000457888 ACDQ96AP0 544 aa8.29□□□□□ -1.08
UBDP1-202ENST00000457888 ATP1B4Q9UN42 357 aaPredicted RBP8.29□□□□□ -1.08
UBDP1-202ENST00000457888 DYRK1BQ9Y463 629 aa8.29□□□□□ -1.08
UBDP1-202ENST00000457888 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
UBDP1-202ENST00000457888 H7C1W4 665 aa8.28□□□□□ -1.08
UBDP1-202ENST00000457888 PROCP04070 461 aa8.28□□□□□ -1.08
UBDP1-202ENST00000457888 GPC1P35052 558 aa8.28□□□□□ -1.08
UBDP1-202ENST00000457888 GALNT6Q8NCL4 622 aa8.28□□□□□ -1.08
UBDP1-202ENST00000457888 TRERF1Q96PN7 1200 aa8.28□□□□□ -1.08
UBDP1-202ENST00000457888 MEN1O00255 615 aa8.27□□□□□ -1.09
UBDP1-202ENST00000457888 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
UBDP1-202ENST00000457888 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
UBDP1-202ENST00000457888 GAS2L1Q99501 681 aaPredicted RBP8.26□□□□□ -1.09
UBDP1-202ENST00000457888 NSFL1CQ9UNZ2 370 aaKnown RBP8.26□□□□□ -1.09
UBDP1-202ENST00000457888 A0A1W2PRU2 124 aa8.25□□□□□ -1.09
UBDP1-202ENST00000457888 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
UBDP1-202ENST00000457888 MX2P20592 715 aa8.25□□□□□ -1.09
UBDP1-202ENST00000457888 POU4F2Q12837 409 aa8.25□□□□□ -1.09
UBDP1-202ENST00000457888 OIP5O43482 229 aa8.23□□□□□ -1.09
UBDP1-202ENST00000457888 SLC27A3Q5K4L6 730 aa8.23□□□□□ -1.09
UBDP1-202ENST00000457888 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
UBDP1-202ENST00000457888 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
UBDP1-202ENST00000457888 GIGYF1O75420 1035 aaPredicted RBP8.22□□□□□ -1.09
UBDP1-202ENST00000457888 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
UBDP1-202ENST00000457888 NBPF15Q8N660 670 aa8.22□□□□□ -1.09
UBDP1-202ENST00000457888 GRIP2Q9C0E4 1043 aa8.22□□□□□ -1.09
UBDP1-202ENST00000457888 ERVK-9P63128 1117 aa8.21□□□□□ -1.1
UBDP1-202ENST00000457888 CC2D2BQ6DHV5 1058 aa8.21□□□□□ -1.1
UBDP1-202ENST00000457888 CCDC125Q86Z20 511 aa8.21□□□□□ -1.1
UBDP1-202ENST00000457888 NUCKS1Q9H1E3 243 aaKnown RBP8.21□□□□□ -1.1
UBDP1-202ENST00000457888 PCDHB9Q9Y5E1 797 aa8.21□□□□□ -1.1
UBDP1-202ENST00000457888 MAP2K3P46734 347 aa8.2□□□□□ -1.1
UBDP1-202ENST00000457888 SNRPNP63162 240 aaKnown RBP8.2□□□□□ -1.1
UBDP1-202ENST00000457888 WDR44Q5JSH3 913 aa8.2□□□□□ -1.1
UBDP1-202ENST00000457888 OXCT2Q9BYC2 517 aaPredicted RBP8.2□□□□□ -1.1
UBDP1-202ENST00000457888 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
UBDP1-202ENST00000457888 SPATA31C2B4DYI2 1134 aa8.19□□□□□ -1.1
UBDP1-202ENST00000457888 F11P03951 625 aa8.19□□□□□ -1.1
UBDP1-202ENST00000457888 CLN3Q13286 438 aa8.19□□□□□ -1.1
UBDP1-202ENST00000457888 DDRGK1Q96HY6 314 aa8.19□□□□□ -1.1
UBDP1-202ENST00000457888 TIMMDC1Q9NPL8 285 aa8.19□□□□□ -1.1
UBDP1-202ENST00000457888 KRBA1A5PL33 1030 aa8.18□□□□□ -1.1
UBDP1-202ENST00000457888 BAG6P46379 1132 aa8.18□□□□□ -1.1
UBDP1-202ENST00000457888 CYP2U1Q7Z449 544 aa8.18□□□□□ -1.1
UBDP1-202ENST00000457888 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
UBDP1-202ENST00000457888 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
UBDP1-202ENST00000457888 MKL2Q9ULH7 1088 aa8.18□□□□□ -1.1
UBDP1-202ENST00000457888 TAS1R3Q7RTX0 852 aa8.17□□□□□ -1.1
UBDP1-202ENST00000457888 ALYREFQ86V81 257 aaKnown RBP8.17□□□□□ -1.1
UBDP1-202ENST00000457888 CFHR5Q9BXR6 569 aa8.17□□□□□ -1.1
UBDP1-202ENST00000457888 KDM4CQ9H3R0 1056 aa8.17□□□□□ -1.1
UBDP1-202ENST00000457888 SHISA8B8ZZ34 492 aa8.16□□□□□ -1.1
UBDP1-202ENST00000457888 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
UBDP1-202ENST00000457888 PRKCSHP14314 528 aaPredicted RBP8.16□□□□□ -1.1
UBDP1-202ENST00000457888 RFC5P40937 340 aa8.16□□□□□ -1.1
UBDP1-202ENST00000457888 RNF20Q5VTR2 975 aa8.16□□□□□ -1.1
UBDP1-202ENST00000457888 BCANQ96GW7 911 aa8.16□□□□□ -1.1
UBDP1-202ENST00000457888 GPBP1L1Q9HC44 474 aaPredicted RBP8.16□□□□□ -1.1
UBDP1-202ENST00000457888 FBXO45P0C2W1 286 aa8.15□□□□□ -1.1
UBDP1-202ENST00000457888 SCTRP47872 440 aa8.15□□□□□ -1.1
UBDP1-202ENST00000457888 KLRG1Q96E93 195 aa8.15□□□□□ -1.1
UBDP1-202ENST00000457888 ARHGEF10LQ9HCE6 1279 aa8.15□□□□□ -1.1
UBDP1-202ENST00000457888 THBS1P07996 1170 aa8.14□□□□□ -1.11
UBDP1-202ENST00000457888 COL8A1P27658 744 aa8.14□□□□□ -1.11
UBDP1-202ENST00000457888 RRAGCQ9HB90 399 aa8.14□□□□□ -1.11
UBDP1-202ENST00000457888 GDF2Q9UK05 429 aaPredicted RBP8.14□□□□□ -1.11
UBDP1-202ENST00000457888 FURINP09958 794 aa8.13□□□□□ -1.11
UBDP1-202ENST00000457888 C1orf229Q6ZS94 237 aaPredicted RBP8.13□□□□□ -1.11
UBDP1-202ENST00000457888 Q8N3U1 123 aa8.13□□□□□ -1.11
UBDP1-202ENST00000457888 ESF1Q9H501 851 aaKnown RBP8.13□□□□□ -1.11
UBDP1-202ENST00000457888 GPAMQ9HCL2 828 aa8.13□□□□□ -1.11
UBDP1-202ENST00000457888 PHF24Q9UPV7 400 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms