RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 NUP160Q12769 1436 aa12.08□□□□□ -0.48
COPS7B-216ENST00000452375 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
COPS7B-216ENST00000452375 FAM69CQ0P6D2 419 aa12.07□□□□□ -0.48
COPS7B-216ENST00000452375 RELBQ01201 579 aa12.06□□□□□ -0.48
COPS7B-216ENST00000452375 GPR161Q8N6U8 529 aaKnown RBP12.06□□□□□ -0.48
COPS7B-216ENST00000452375 ABCC10Q5T3U5 1492 aa12.06□□□□□ -0.48
COPS7B-216ENST00000452375 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
COPS7B-216ENST00000452375 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
COPS7B-216ENST00000452375 INTS6LQ5JSJ4 861 aaKnown RBP12.05□□□□□ -0.48
COPS7B-216ENST00000452375 Q6ZVU0 165 aa12.05□□□□□ -0.48
COPS7B-216ENST00000452375 EPS8L1Q8TE68 723 aa12.05□□□□□ -0.48
COPS7B-216ENST00000452375 CNTNAP3BQ96NU0 1288 aa12.05□□□□□ -0.48
COPS7B-216ENST00000452375 CNTNAP3Q9BZ76 1288 aa12.05□□□□□ -0.48
COPS7B-216ENST00000452375 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
COPS7B-216ENST00000452375 OCSTAMPQ9BR26 566 aa12.04□□□□□ -0.48
COPS7B-216ENST00000452375 SPINT1O43278 529 aa12.03□□□□□ -0.48
COPS7B-216ENST00000452375 KRT76Q01546 638 aa12.03□□□□□ -0.48
COPS7B-216ENST00000452375 PTK2Q05397 1052 aa12.03□□□□□ -0.48
COPS7B-216ENST00000452375 DHX9Q08211 1270 aaKnown RBP12.03□□□□□ -0.48
COPS7B-216ENST00000452375 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
COPS7B-216ENST00000452375 TMPRSS4Q9NRS4 437 aa12.03□□□□□ -0.48
COPS7B-216ENST00000452375 ADAMTS12P58397 1594 aa12.02□□□□□ -0.49
COPS7B-216ENST00000452375 DIP2BQ9P265 1576 aa12.02□□□□□ -0.49
COPS7B-216ENST00000452375 KDM6BO15054 1643 aa12.02□□□□□ -0.49
COPS7B-216ENST00000452375 CTSOP43234 321 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-216ENST00000452375 CCDC155Q8N6L0 562 aa12.02□□□□□ -0.49
COPS7B-216ENST00000452375 INSM2Q96T92 566 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-216ENST00000452375 ZNF395Q9H8N7 513 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-216ENST00000452375 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-216ENST00000452375 CDV3Q9UKY7 258 aaKnown RBP12.02□□□□□ -0.49
COPS7B-216ENST00000452375 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
COPS7B-216ENST00000452375 HMX1Q9NP08 348 aaPredicted RBP12.01□□□□□ -0.49
COPS7B-216ENST00000452375 ZC3H4Q9UPT8 1303 aaKnown RBP12□□□□□ -0.49
COPS7B-216ENST00000452375 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
COPS7B-216ENST00000452375 PPP2R2DQ66LE6 453 aa11.99□□□□□ -0.49
COPS7B-216ENST00000452375 COL25A1Q9BXS0 654 aaPredicted RBP11.99□□□□□ -0.49
COPS7B-216ENST00000452375 MAPKBP1O60336 1514 aa11.99□□□□□ -0.49
COPS7B-216ENST00000452375 CDC14CA4D256 554 aa11.98□□□□□ -0.49
COPS7B-216ENST00000452375 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
COPS7B-216ENST00000452375 ZNF784Q8NCA9 323 aaPredicted RBP11.97□□□□□ -0.49
COPS7B-216ENST00000452375 TSPOAP1O95153 1857 aa11.97□□□□□ -0.49
COPS7B-216ENST00000452375 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.49
COPS7B-216ENST00000452375 DZIP3Q86Y13 1208 aaKnown RBP11.96□□□□□ -0.49
COPS7B-216ENST00000452375 VWA5B2Q8N398 1253 aa11.96□□□□□ -0.49
COPS7B-216ENST00000452375 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
COPS7B-216ENST00000452375 NBPF20Q3BBV1 942 aa11.95□□□□□ -0.5
COPS7B-216ENST00000452375 RNFT1Q5M7Z0 435 aa11.95□□□□□ -0.5
COPS7B-216ENST00000452375 ADCY10Q96PN6 1610 aa11.94□□□□□ -0.5
COPS7B-216ENST00000452375 GPSM3Q9Y4H4 160 aa11.94□□□□□ -0.5
COPS7B-216ENST00000452375 ERVH48-1M5A8F1 160 aa11.93□□□□□ -0.5
COPS7B-216ENST00000452375 PNMA1Q8ND90 353 aa11.93□□□□□ -0.5
COPS7B-216ENST00000452375 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
COPS7B-216ENST00000452375 HECW2Q9P2P5 1572 aa11.92□□□□□ -0.5
COPS7B-216ENST00000452375 ITGA6P23229 1130 aa11.92□□□□□ -0.5
COPS7B-216ENST00000452375 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
COPS7B-216ENST00000452375 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
COPS7B-216ENST00000452375 RFC5P40937 340 aa11.91□□□□□ -0.5
COPS7B-216ENST00000452375 ADH1AP07327 375 aa11.9□□□□□ -0.5
COPS7B-216ENST00000452375 SVOPQ8N4V2 548 aa11.9□□□□□ -0.5
COPS7B-216ENST00000452375 NANOS1Q8WY41 292 aaKnown RBP11.9□□□□□ -0.5
COPS7B-216ENST00000452375 CYLDQ9NQC7 956 aa11.9□□□□□ -0.5
COPS7B-216ENST00000452375 SV2AQ7L0J3 742 aa11.89□□□□□ -0.51
COPS7B-216ENST00000452375 KCTD17Q8N5Z5 321 aa11.89□□□□□ -0.51
COPS7B-216ENST00000452375 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
COPS7B-216ENST00000452375 LILRA1O75019 489 aa11.88□□□□□ -0.51
COPS7B-216ENST00000452375 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
COPS7B-216ENST00000452375 WHAMMQ8TF30 809 aa11.88□□□□□ -0.51
COPS7B-216ENST00000452375 ADAMTS8Q9UP79 889 aa11.88□□□□□ -0.51
COPS7B-216ENST00000452375 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
COPS7B-216ENST00000452375 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
COPS7B-216ENST00000452375 ZNF385CQ66K41 422 aaPredicted RBP11.87□□□□□ -0.51
COPS7B-216ENST00000452375 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
COPS7B-216ENST00000452375 PTGIRP43119 386 aa11.86□□□□□ -0.51
COPS7B-216ENST00000452375 PPRC1Q5VV67 1664 aaKnown RBP11.85□□□□□ -0.51
COPS7B-216ENST00000452375 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
COPS7B-216ENST00000452375 GSK3AP49840 483 aa11.85□□□□□ -0.51
COPS7B-216ENST00000452375 PRICKLE2Q7Z3G6 844 aa11.85□□□□□ -0.51
COPS7B-216ENST00000452375 KDF1Q8NAX2 398 aaPredicted RBP11.85□□□□□ -0.51
COPS7B-216ENST00000452375 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
COPS7B-216ENST00000452375 RHOQP17081 205 aa11.84□□□□□ -0.51
COPS7B-216ENST00000452375 PCDHB9Q9Y5E1 797 aa11.84□□□□□ -0.51
COPS7B-216ENST00000452375 COL17A1Q9UMD9 1497 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-216ENST00000452375 ESPNB1AK53 854 aa11.83□□□□□ -0.52
COPS7B-216ENST00000452375 LYSMD3Q7Z3D4 306 aa11.83□□□□□ -0.52
COPS7B-216ENST00000452375 FBXO41Q8TF61 875 aa11.83□□□□□ -0.52
COPS7B-216ENST00000452375 TMEM151AQ8N4L1 468 aa11.82□□□□□ -0.52
COPS7B-216ENST00000452375 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
COPS7B-216ENST00000452375 CUEDC1Q9NWM3 386 aaPredicted RBP11.82□□□□□ -0.52
COPS7B-216ENST00000452375 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
COPS7B-216ENST00000452375 GDF11O95390 407 aa11.81□□□□□ -0.52
COPS7B-216ENST00000452375 RASSF7Q02833 373 aa11.81□□□□□ -0.52
COPS7B-216ENST00000452375 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
COPS7B-216ENST00000452375 TOP2BQ02880 1626 aa11.8□□□□□ -0.52
COPS7B-216ENST00000452375 MEN1O00255 615 aa11.79□□□□□ -0.52
COPS7B-216ENST00000452375 BCANQ96GW7 911 aa11.79□□□□□ -0.52
COPS7B-216ENST00000452375 ZBBXA8MT70 800 aa11.78□□□□□ -0.52
COPS7B-216ENST00000452375 RNF225M0QZC1 329 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-216ENST00000452375 GLI2P10070 1586 aa11.78□□□□□ -0.52
COPS7B-216ENST00000452375 ATP5J2-PTCD1G3V325 749 aa11.77□□□□□ -0.53
COPS7B-216ENST00000452375 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms