RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 AEBP2Q6ZN18 517 aaPredicted RBP35.57■■■■□ 3.28
COPS7B-216ENST00000452375 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
COPS7B-216ENST00000452375 SENP3Q9H4L4 574 aaPredicted RBP30.27■■■□□ 2.44
COPS7B-216ENST00000452375 PHF23Q9BUL5 403 aaPredicted RBP29.94■■■□□ 2.38
COPS7B-216ENST00000452375 FOXD1Q16676 465 aa28.26■■■□□ 2.11
COPS7B-216ENST00000452375 PLPPR3Q6T4P5 718 aa26.99■■□□□ 1.91
COPS7B-216ENST00000452375 PPP6R1Q9UPN7 881 aa26.49■■□□□ 1.83
COPS7B-216ENST00000452375 PIAS4Q8N2W9 510 aaPredicted RBP26.47■■□□□ 1.83
COPS7B-216ENST00000452375 ADRA2BP18089 450 aa26.45■■□□□ 1.82
COPS7B-216ENST00000452375 MSH5O43196 834 aa26.37■■□□□ 1.81
COPS7B-216ENST00000452375 POTEDQ86YR6 584 aa25.74■■□□□ 1.71
COPS7B-216ENST00000452375 MAPK8IP2Q13387 824 aaPredicted RBP24.3■■□□□ 1.48
COPS7B-216ENST00000452375 SCAF1Q9H7N4 1312 aaKnown RBP24.08■■□□□ 1.44
COPS7B-216ENST00000452375 DMRT2Q9Y5R5 561 aa24■■□□□ 1.43
COPS7B-216ENST00000452375 PPP4R3CPQ6ZMV5 832 aa23.71■■□□□ 1.39
COPS7B-216ENST00000452375 DCAF8L1A6NGE4 600 aa23.23■■□□□ 1.31
COPS7B-216ENST00000452375 CNKSR2Q8WXI2 1034 aa23.2■■□□□ 1.3
COPS7B-216ENST00000452375 HOXD11P31277 338 aaPredicted RBP23.1■■□□□ 1.29
COPS7B-216ENST00000452375 RNF216Q9NWF9 866 aaPredicted RBP22.96■■□□□ 1.27
COPS7B-216ENST00000452375 NCBP3Q53F19 620 aaKnown RBP22.77■■□□□ 1.24
COPS7B-216ENST00000452375 CACNB1Q02641 598 aaPredicted RBP22.71■■□□□ 1.23
COPS7B-216ENST00000452375 RNF39Q9H2S5 420 aa22.51■■□□□ 1.19
COPS7B-216ENST00000452375 NPM3O75607 178 aaKnown RBP22.49■■□□□ 1.19
COPS7B-216ENST00000452375 C1QBPQ07021 282 aaKnown RBP22.16■■□□□ 1.14
COPS7B-216ENST00000452375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.14
COPS7B-216ENST00000452375 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
COPS7B-216ENST00000452375 KCNA4P22459 653 aa22.14■■□□□ 1.13
COPS7B-216ENST00000452375 U3KPZ7 1027 aaPredicted RBP21.65■■□□□ 1.06
COPS7B-216ENST00000452375 SLC4A2P04920 1241 aa21.45■■□□□ 1.02
COPS7B-216ENST00000452375 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
COPS7B-216ENST00000452375 CAPN15O75808 1086 aa21.36■■□□□ 1.01
COPS7B-216ENST00000452375 DSG3P32926 999 aa21.13■□□□□ 0.97
COPS7B-216ENST00000452375 TRHP20396 242 aaPredicted RBP21.05■□□□□ 0.96
COPS7B-216ENST00000452375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
COPS7B-216ENST00000452375 APLP2Q06481 763 aa20.96■□□□□ 0.95
COPS7B-216ENST00000452375 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
COPS7B-216ENST00000452375 ABCB7O75027 752 aa20.92■□□□□ 0.94
COPS7B-216ENST00000452375 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
COPS7B-216ENST00000452375 ZNF219Q9P2Y4 722 aaPredicted RBP20.88■□□□□ 0.93
COPS7B-216ENST00000452375 SAMD1Q6SPF0 538 aaPredicted RBP20.87■□□□□ 0.93
COPS7B-216ENST00000452375 MYCNP04198 464 aaPredicted RBP20.76■□□□□ 0.91
COPS7B-216ENST00000452375 FOXD4L1Q9NU39 408 aa20.59■□□□□ 0.89
COPS7B-216ENST00000452375 POLA2Q14181 598 aa20.43■□□□□ 0.86
COPS7B-216ENST00000452375 ATF5Q9Y2D1 282 aaPredicted RBP20.37■□□□□ 0.85
COPS7B-216ENST00000452375 ZBTB22O15209 634 aa20.35■□□□□ 0.85
COPS7B-216ENST00000452375 POTEHQ6S545 545 aa20.18■□□□□ 0.82
COPS7B-216ENST00000452375 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
COPS7B-216ENST00000452375 ZBTB12Q9Y330 459 aaPredicted RBP19.91■□□□□ 0.78
COPS7B-216ENST00000452375 ATXN8OSP0DMR3 200 aa19.85■□□□□ 0.77
COPS7B-216ENST00000452375 OSCARQ8IYS5 282 aa19.81■□□□□ 0.76
COPS7B-216ENST00000452375 CHRDL2Q6WN34 429 aa19.72■□□□□ 0.75
COPS7B-216ENST00000452375 AKT1S1Q96B36 256 aa19.67■□□□□ 0.74
COPS7B-216ENST00000452375 REM2Q8IYK8 340 aaPredicted RBP19.54■□□□□ 0.72
COPS7B-216ENST00000452375 FBLN2P98095 1184 aa19.52■□□□□ 0.72
COPS7B-216ENST00000452375 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
COPS7B-216ENST00000452375 MKRN4PQ13434 485 aaPredicted RBP19.39■□□□□ 0.69
COPS7B-216ENST00000452375 PITPNM1O00562 1244 aa19.35■□□□□ 0.69
COPS7B-216ENST00000452375 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
COPS7B-216ENST00000452375 SPDYE2BA6NHP3 402 aa19.32■□□□□ 0.68
COPS7B-216ENST00000452375 SPDYE6P0CI01 402 aa19.32■□□□□ 0.68
COPS7B-216ENST00000452375 SPDYE2Q495Y8 402 aa19.32■□□□□ 0.68
COPS7B-216ENST00000452375 PIP4P2Q8N4L2 257 aa19.27■□□□□ 0.68
COPS7B-216ENST00000452375 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
COPS7B-216ENST00000452375 CLEC11AQ9Y240 323 aa19.11■□□□□ 0.65
COPS7B-216ENST00000452375 FXR2P51116 673 aaKnown RBP eCLIP19.1■□□□□ 0.65
COPS7B-216ENST00000452375 SSUH2Q9Y2M2 353 aa19.06■□□□□ 0.64
COPS7B-216ENST00000452375 SPDYE1Q8NFV5 336 aaPredicted RBP19.01■□□□□ 0.63
COPS7B-216ENST00000452375 HAX1O00165 279 aa18.97■□□□□ 0.63
COPS7B-216ENST00000452375 SP7Q8TDD2 431 aaPredicted RBP18.92■□□□□ 0.62
COPS7B-216ENST00000452375 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
COPS7B-216ENST00000452375 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
COPS7B-216ENST00000452375 CHADLQ6NUI6 762 aa18.74■□□□□ 0.59
COPS7B-216ENST00000452375 PRR29P0C7W0 189 aa18.72■□□□□ 0.59
COPS7B-216ENST00000452375 EVX2Q03828 476 aa18.72■□□□□ 0.59
COPS7B-216ENST00000452375 SPDYE4A6NLX3 237 aa18.51■□□□□ 0.55
COPS7B-216ENST00000452375 C19orf67A6NJJ6 358 aa18.5■□□□□ 0.55
COPS7B-216ENST00000452375 FARP1Q9Y4F1 1045 aaPredicted RBP18.36■□□□□ 0.53
COPS7B-216ENST00000452375 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
COPS7B-216ENST00000452375 CD44P16070 742 aaKnown RBP18.28■□□□□ 0.52
COPS7B-216ENST00000452375 GABBR2O75899 941 aa18.27■□□□□ 0.52
COPS7B-216ENST00000452375 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
COPS7B-216ENST00000452375 ZRANB1Q9UGI0 708 aa18.05■□□□□ 0.48
COPS7B-216ENST00000452375 PROM2Q8N271 834 aa17.93■□□□□ 0.46
COPS7B-216ENST00000452375 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
COPS7B-216ENST00000452375 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
COPS7B-216ENST00000452375 MNX1P50219 401 aaPredicted RBP17.88■□□□□ 0.45
COPS7B-216ENST00000452375 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
COPS7B-216ENST00000452375 POTEIP0CG38 1075 aa17.87■□□□□ 0.45
COPS7B-216ENST00000452375 DCBLD2Q96PD2 775 aa17.82■□□□□ 0.44
COPS7B-216ENST00000452375 PHF12Q96QT6 1004 aa17.82■□□□□ 0.44
COPS7B-216ENST00000452375 CLCN6P51797 869 aa17.81■□□□□ 0.44
COPS7B-216ENST00000452375 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
COPS7B-216ENST00000452375 LHX8Q68G74 356 aa17.78■□□□□ 0.44
COPS7B-216ENST00000452375 FKBP8Q14318 412 aa17.7■□□□□ 0.42
COPS7B-216ENST00000452375 MIER1Q8N108 512 aa17.7■□□□□ 0.42
COPS7B-216ENST00000452375 TSPYL2Q9H2G4 693 aaPredicted RBP17.69■□□□□ 0.42
COPS7B-216ENST00000452375 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
COPS7B-216ENST00000452375 PLCD3Q8N3E9 789 aa17.58■□□□□ 0.4
COPS7B-216ENST00000452375 MS4A3Q96HJ5 214 aa17.55■□□□□ 0.4
COPS7B-216ENST00000452375 CCDC61Q9Y6R9 512 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms