RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
COPS7B-214ENST00000449784 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
COPS7B-214ENST00000449784 PPLO60437 1756 aa13.55□□□□□ -0.24
COPS7B-214ENST00000449784 NRXN3Q9Y4C0 1643 aa13.55□□□□□ -0.24
COPS7B-214ENST00000449784 PPEF1O14829 653 aaPredicted RBP13.55□□□□□ -0.24
COPS7B-214ENST00000449784 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
COPS7B-214ENST00000449784 SLC10A3P09131 477 aa13.55□□□□□ -0.24
COPS7B-214ENST00000449784 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
COPS7B-214ENST00000449784 MYOM2P54296 1465 aa13.55□□□□□ -0.24
COPS7B-214ENST00000449784 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
COPS7B-214ENST00000449784 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
COPS7B-214ENST00000449784 TBX22Q9Y458 520 aa13.54□□□□□ -0.24
COPS7B-214ENST00000449784 NRXN1Q9ULB1 1477 aa13.54□□□□□ -0.24
COPS7B-214ENST00000449784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
COPS7B-214ENST00000449784 S1PR4O95977 384 aa13.53□□□□□ -0.24
COPS7B-214ENST00000449784 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
COPS7B-214ENST00000449784 PXYLP1Q8TE99 480 aa13.52□□□□□ -0.25
COPS7B-214ENST00000449784 BCANQ96GW7 911 aa13.52□□□□□ -0.25
COPS7B-214ENST00000449784 ADGRF5Q8IZF2 1346 aa13.52□□□□□ -0.25
COPS7B-214ENST00000449784 PIK3C2GO75747 1445 aa13.52□□□□□ -0.25
COPS7B-214ENST00000449784 CPS1P31327 1500 aa13.52□□□□□ -0.25
COPS7B-214ENST00000449784 NWD1Q149M9 1564 aa13.51□□□□□ -0.25
COPS7B-214ENST00000449784 FECHP22830 423 aa13.5□□□□□ -0.25
COPS7B-214ENST00000449784 SLC19A1P41440 591 aa13.5□□□□□ -0.25
COPS7B-214ENST00000449784 NKTRP30414 1462 aaKnown RBP13.49□□□□□ -0.25
COPS7B-214ENST00000449784 OATP04181 439 aa13.49□□□□□ -0.25
COPS7B-214ENST00000449784 KCNA6P17658 529 aa13.49□□□□□ -0.25
COPS7B-214ENST00000449784 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
COPS7B-214ENST00000449784 HIC1Q14526 733 aa13.49□□□□□ -0.25
COPS7B-214ENST00000449784 PUS10Q3MIT2 529 aaKnown RBP13.49□□□□□ -0.25
COPS7B-214ENST00000449784 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
COPS7B-214ENST00000449784 IQSEC2Q5JU85 1478 aa13.48□□□□□ -0.25
COPS7B-214ENST00000449784 METP08581 1390 aa13.48□□□□□ -0.25
COPS7B-214ENST00000449784 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
COPS7B-214ENST00000449784 METTL3Q86U44 580 aaKnown RBP13.48□□□□□ -0.25
COPS7B-214ENST00000449784 EMID1Q96A84 441 aaPredicted RBP13.48□□□□□ -0.25
COPS7B-214ENST00000449784 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
COPS7B-214ENST00000449784 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
COPS7B-214ENST00000449784 SETD1AO15047 1707 aaKnown RBP13.47□□□□□ -0.25
COPS7B-214ENST00000449784 NLRP7Q8WX94 980 aa13.47□□□□□ -0.25
COPS7B-214ENST00000449784 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
COPS7B-214ENST00000449784 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
COPS7B-214ENST00000449784 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
COPS7B-214ENST00000449784 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
COPS7B-214ENST00000449784 NR1I2O75469 434 aa13.46□□□□□ -0.25
COPS7B-214ENST00000449784 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.25
COPS7B-214ENST00000449784 XRN1Q8IZH2 1706 aaKnown RBP13.45□□□□□ -0.26
COPS7B-214ENST00000449784 ADH1BP00325 375 aa13.45□□□□□ -0.26
COPS7B-214ENST00000449784 SMYD5Q6GMV2 418 aa13.45□□□□□ -0.26
COPS7B-214ENST00000449784 CHD2O14647 1828 aaKnown RBP13.45□□□□□ -0.26
COPS7B-214ENST00000449784 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
COPS7B-214ENST00000449784 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
COPS7B-214ENST00000449784 C14orf93Q9H972 538 aaKnown RBP13.44□□□□□ -0.26
COPS7B-214ENST00000449784 LAMC1P11047 1609 aa13.43□□□□□ -0.26
COPS7B-214ENST00000449784 GNPATO15228 680 aa13.43□□□□□ -0.26
COPS7B-214ENST00000449784 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
COPS7B-214ENST00000449784 ANKLE1Q8NAG6 615 aa13.43□□□□□ -0.26
COPS7B-214ENST00000449784 L3MBTL2Q969R5 705 aa13.43□□□□□ -0.26
COPS7B-214ENST00000449784 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
COPS7B-214ENST00000449784 TMEM94Q12767 1356 aa13.43□□□□□ -0.26
COPS7B-214ENST00000449784 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
COPS7B-214ENST00000449784 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
COPS7B-214ENST00000449784 TRIM67Q6ZTA4 783 aa13.42□□□□□ -0.26
COPS7B-214ENST00000449784 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
COPS7B-214ENST00000449784 SLC6A16Q9GZN6 736 aa13.42□□□□□ -0.26
COPS7B-214ENST00000449784 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
COPS7B-214ENST00000449784 TECPR2O15040 1411 aa13.41□□□□□ -0.26
COPS7B-214ENST00000449784 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-214ENST00000449784 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
COPS7B-214ENST00000449784 LIAT1Q6ZQX7 453 aa13.41□□□□□ -0.26
COPS7B-214ENST00000449784 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
COPS7B-214ENST00000449784 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.26
COPS7B-214ENST00000449784 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
COPS7B-214ENST00000449784 LRPPRCP42704 1394 aaKnown RBP13.4□□□□□ -0.26
COPS7B-214ENST00000449784 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
COPS7B-214ENST00000449784 GPR37O15354 613 aa13.39□□□□□ -0.27
COPS7B-214ENST00000449784 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-214ENST00000449784 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
COPS7B-214ENST00000449784 YTHDC2Q9H6S0 1430 aaKnown RBP13.39□□□□□ -0.27
COPS7B-214ENST00000449784 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
COPS7B-214ENST00000449784 ZNF697Q5TEC3 545 aa13.38□□□□□ -0.27
COPS7B-214ENST00000449784 TNFRSF10AO00220 468 aa13.37□□□□□ -0.27
COPS7B-214ENST00000449784 PLA2G2CQ5R387 149 aa13.37□□□□□ -0.27
COPS7B-214ENST00000449784 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
COPS7B-214ENST00000449784 ZNF598Q86UK7 904 aaKnown RBP13.37□□□□□ -0.27
COPS7B-214ENST00000449784 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
COPS7B-214ENST00000449784 SPSB2Q99619 263 aa13.37□□□□□ -0.27
COPS7B-214ENST00000449784 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
COPS7B-214ENST00000449784 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
COPS7B-214ENST00000449784 ZNF787Q6DD87 383 aa13.36□□□□□ -0.27
COPS7B-214ENST00000449784 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
COPS7B-214ENST00000449784 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
COPS7B-214ENST00000449784 DAXXQ9UER7 740 aaPredicted RBP13.35□□□□□ -0.27
COPS7B-214ENST00000449784 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
COPS7B-214ENST00000449784 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
COPS7B-214ENST00000449784 MSH6P52701 1360 aa13.34□□□□□ -0.27
COPS7B-214ENST00000449784 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
COPS7B-214ENST00000449784 FUT2Q10981 343 aa13.34□□□□□ -0.27
COPS7B-214ENST00000449784 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
COPS7B-214ENST00000449784 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms