RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 AEBP1Q8IUX7 1158 aa18.75■□□□□ 0.59
CTSS-202ENST00000448301 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
CTSS-202ENST00000448301 TATP17735 454 aaPredicted RBP18.74■□□□□ 0.59
CTSS-202ENST00000448301 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
CTSS-202ENST00000448301 A0A0G2JS52 829 aa18.74■□□□□ 0.59
CTSS-202ENST00000448301 HMOX1P09601 288 aa18.74■□□□□ 0.59
CTSS-202ENST00000448301 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
CTSS-202ENST00000448301 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.59
CTSS-202ENST00000448301 MYT1Q01538 1121 aa18.74■□□□□ 0.59
CTSS-202ENST00000448301 DDB1Q16531 1140 aa18.73■□□□□ 0.59
CTSS-202ENST00000448301 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
CTSS-202ENST00000448301 WDR43Q15061 677 aaKnown RBP eCLIP18.72■□□□□ 0.59
CTSS-202ENST00000448301 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
CTSS-202ENST00000448301 FCHSD2O94868 740 aa18.71■□□□□ 0.59
CTSS-202ENST00000448301 EXOC5O00471 708 aa18.7■□□□□ 0.58
CTSS-202ENST00000448301 MIER1Q8N108 512 aa18.7■□□□□ 0.58
CTSS-202ENST00000448301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
CTSS-202ENST00000448301 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
CTSS-202ENST00000448301 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
CTSS-202ENST00000448301 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
CTSS-202ENST00000448301 PNISRQ8TF01 805 aaKnown RBP18.68■□□□□ 0.58
CTSS-202ENST00000448301 PCDH11XQ9BZA7 1347 aa18.67■□□□□ 0.58
CTSS-202ENST00000448301 PCDH11YQ9BZA8 1340 aa18.67■□□□□ 0.58
CTSS-202ENST00000448301 PDE3BQ13370 1112 aa18.67■□□□□ 0.58
CTSS-202ENST00000448301 AMOTQ4VCS5 1084 aa18.67■□□□□ 0.58
CTSS-202ENST00000448301 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
CTSS-202ENST00000448301 PNNQ9H307 717 aaKnown RBP18.67■□□□□ 0.58
CTSS-202ENST00000448301 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
CTSS-202ENST00000448301 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
CTSS-202ENST00000448301 SBF2Q86WG5 1849 aa18.66■□□□□ 0.58
CTSS-202ENST00000448301 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
CTSS-202ENST00000448301 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
CTSS-202ENST00000448301 PLEKHF1Q96S99 279 aa18.65■□□□□ 0.58
CTSS-202ENST00000448301 DOT1LQ8TEK3 1739 aa18.64■□□□□ 0.57
CTSS-202ENST00000448301 MARCH10Q8NA82 808 aaPredicted RBP18.64■□□□□ 0.57
CTSS-202ENST00000448301 BCL9O00512 1426 aa18.64■□□□□ 0.57
CTSS-202ENST00000448301 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
CTSS-202ENST00000448301 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
CTSS-202ENST00000448301 ADAMTS7Q9UKP4 1686 aa18.62■□□□□ 0.57
CTSS-202ENST00000448301 CYP27B1O15528 508 aa18.62■□□□□ 0.57
CTSS-202ENST00000448301 NEFMP07197 916 aa18.62■□□□□ 0.57
CTSS-202ENST00000448301 MTHFSDQ2M296 383 aaKnown RBP18.62■□□□□ 0.57
CTSS-202ENST00000448301 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
CTSS-202ENST00000448301 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
CTSS-202ENST00000448301 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
CTSS-202ENST00000448301 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
CTSS-202ENST00000448301 NHSQ6T4R5 1651 aa18.61■□□□□ 0.57
CTSS-202ENST00000448301 PHKG2P15735 406 aa18.61■□□□□ 0.57
CTSS-202ENST00000448301 ZNF530Q6P9A1 599 aaPredicted RBP18.61■□□□□ 0.57
CTSS-202ENST00000448301 GAS2L2Q8NHY3 880 aa18.61■□□□□ 0.57
CTSS-202ENST00000448301 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
CTSS-202ENST00000448301 EP400Q96L91 3159 aa18.6■□□□□ 0.57
CTSS-202ENST00000448301 ITGB4P16144 1822 aa18.6■□□□□ 0.57
CTSS-202ENST00000448301 NKX1-1Q15270 411 aaPredicted RBP18.59■□□□□ 0.57
CTSS-202ENST00000448301 AKAP4Q5JQC9 854 aa18.59■□□□□ 0.57
CTSS-202ENST00000448301 C1orf141Q5JVX7 400 aa18.59■□□□□ 0.57
CTSS-202ENST00000448301 ILDR2Q71H61 639 aa18.59■□□□□ 0.57
CTSS-202ENST00000448301 FAM182BQ5T319 152 aa18.58■□□□□ 0.57
CTSS-202ENST00000448301 FAM196AQ6ZSG2 479 aa18.58■□□□□ 0.57
CTSS-202ENST00000448301 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.57
CTSS-202ENST00000448301 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.57
CTSS-202ENST00000448301 HSP90AB1P08238 724 aaKnown RBP18.57■□□□□ 0.56
CTSS-202ENST00000448301 TNS1Q9HBL0 1735 aaKnown RBP18.57■□□□□ 0.56
CTSS-202ENST00000448301 MAP3K5Q99683 1374 aa18.57■□□□□ 0.56
CTSS-202ENST00000448301 KDM6AO15550 1401 aaPredicted RBP18.56■□□□□ 0.56
CTSS-202ENST00000448301 NFE2L2Q16236 605 aa18.56■□□□□ 0.56
CTSS-202ENST00000448301 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
CTSS-202ENST00000448301 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
CTSS-202ENST00000448301 DCAF5Q96JK2 942 aa18.55■□□□□ 0.56
CTSS-202ENST00000448301 BTAF1O14981 1849 aa18.54■□□□□ 0.56
CTSS-202ENST00000448301 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
CTSS-202ENST00000448301 MRC1P22897 1456 aa18.54■□□□□ 0.56
CTSS-202ENST00000448301 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
CTSS-202ENST00000448301 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
CTSS-202ENST00000448301 MPRIPQ6WCQ1 1025 aa18.52■□□□□ 0.56
CTSS-202ENST00000448301 APAF1O14727 1248 aa18.5■□□□□ 0.55
CTSS-202ENST00000448301 ACSBG1Q96GR2 724 aa18.5■□□□□ 0.55
CTSS-202ENST00000448301 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
CTSS-202ENST00000448301 RGPD3A6NKT7 1758 aaPredicted RBP18.5■□□□□ 0.55
CTSS-202ENST00000448301 RGPD4Q7Z3J3 1758 aa18.5■□□□□ 0.55
CTSS-202ENST00000448301 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
CTSS-202ENST00000448301 RNMTO43148 476 aaKnown RBP18.49■□□□□ 0.55
CTSS-202ENST00000448301 RIPK4P57078 832 aa18.49■□□□□ 0.55
CTSS-202ENST00000448301 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
CTSS-202ENST00000448301 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
CTSS-202ENST00000448301 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
CTSS-202ENST00000448301 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
CTSS-202ENST00000448301 PAPPAQ13219 1627 aa18.48■□□□□ 0.55
CTSS-202ENST00000448301 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
CTSS-202ENST00000448301 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
CTSS-202ENST00000448301 IL17REQ8NFR9 667 aa18.48■□□□□ 0.55
CTSS-202ENST00000448301 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
CTSS-202ENST00000448301 KCNQ2O43526 872 aa18.47■□□□□ 0.55
CTSS-202ENST00000448301 TRIM37O94972 964 aa18.47■□□□□ 0.55
CTSS-202ENST00000448301 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
CTSS-202ENST00000448301 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
CTSS-202ENST00000448301 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
CTSS-202ENST00000448301 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
CTSS-202ENST00000448301 LY75O60449 1722 aa18.46■□□□□ 0.55
CTSS-202ENST00000448301 CABP4P57796 275 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms