RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 SEPT3Q9UH03 358 aa10.1□□□□□ -0.79
COL11A1-205ENST00000447608 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
COL11A1-205ENST00000447608 MKNK1Q9BUB5 465 aa10.09□□□□□ -0.79
COL11A1-205ENST00000447608 PCDHB11Q9Y5F2 797 aa10.09□□□□□ -0.79
COL11A1-205ENST00000447608 ZPR1O75312 459 aa10.08□□□□□ -0.8
COL11A1-205ENST00000447608 MAPK1P28482 360 aa10.08□□□□□ -0.8
COL11A1-205ENST00000447608 USP4Q13107 963 aa10.08□□□□□ -0.8
COL11A1-205ENST00000447608 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
COL11A1-205ENST00000447608 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
COL11A1-205ENST00000447608 CAPN12Q6ZSI9 719 aa10.08□□□□□ -0.8
COL11A1-205ENST00000447608 TAGLNQ01995 201 aaKnown RBP10.07□□□□□ -0.8
COL11A1-205ENST00000447608 ECM1Q16610 540 aa10.07□□□□□ -0.8
COL11A1-205ENST00000447608 ZNF326Q5BKZ1 582 aaKnown RBP10.07□□□□□ -0.8
COL11A1-205ENST00000447608 SLC10A4Q96EP9 437 aa10.07□□□□□ -0.8
COL11A1-205ENST00000447608 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
COL11A1-205ENST00000447608 C21orf2O43822 256 aa10.06□□□□□ -0.8
COL11A1-205ENST00000447608 TSEN2Q8NCE0 465 aaKnown RBP10.06□□□□□ -0.8
COL11A1-205ENST00000447608 ESPNB1AK53 854 aa10.05□□□□□ -0.8
COL11A1-205ENST00000447608 TCF3P15923 654 aa10.05□□□□□ -0.8
COL11A1-205ENST00000447608 WEE1P30291 646 aa10.05□□□□□ -0.8
COL11A1-205ENST00000447608 MTMR3Q13615 1198 aa10.05□□□□□ -0.8
COL11A1-205ENST00000447608 FBXO33Q7Z6M2 555 aa10.05□□□□□ -0.8
COL11A1-205ENST00000447608 ZNF511Q8NB15 262 aa10.05□□□□□ -0.8
COL11A1-205ENST00000447608 GAS2L2Q8NHY3 880 aa10.05□□□□□ -0.8
COL11A1-205ENST00000447608 PURBQ96QR8 312 aaKnown RBP10.05□□□□□ -0.8
COL11A1-205ENST00000447608 FKBP4Q02790 459 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL11A1-205ENST00000447608 FKBP5Q13451 457 aaPredicted RBP10.04□□□□□ -0.8
COL11A1-205ENST00000447608 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
COL11A1-205ENST00000447608 ASB16Q96NS5 453 aa10.04□□□□□ -0.8
COL11A1-205ENST00000447608 SLC6A16Q9GZN6 736 aa10.04□□□□□ -0.8
COL11A1-205ENST00000447608 DCTN4Q9UJW0 460 aa10.04□□□□□ -0.8
COL11A1-205ENST00000447608 ARHGAP4P98171 946 aa10.03□□□□□ -0.8
COL11A1-205ENST00000447608 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.03□□□□□ -0.8
COL11A1-205ENST00000447608 SF3B2Q13435 895 aaKnown RBP10.02□□□□□ -0.81
COL11A1-205ENST00000447608 MTRQ99707 1265 aa10.02□□□□□ -0.81
COL11A1-205ENST00000447608 C1QTNF2Q9BXJ5 285 aa10.02□□□□□ -0.81
COL11A1-205ENST00000447608 M0R2N6 131 aa10.01□□□□□ -0.81
COL11A1-205ENST00000447608 RAB15P59190 212 aa10.01□□□□□ -0.81
COL11A1-205ENST00000447608 NAA30Q147X3 362 aaPredicted RBP10.01□□□□□ -0.81
COL11A1-205ENST00000447608 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
COL11A1-205ENST00000447608 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
COL11A1-205ENST00000447608 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
COL11A1-205ENST00000447608 PCDH10Q9P2E7 1040 aa10.01□□□□□ -0.81
COL11A1-205ENST00000447608 PTCD1O75127 700 aaKnown RBP10□□□□□ -0.81
COL11A1-205ENST00000447608 ZNF516Q92618 1163 aa10□□□□□ -0.81
COL11A1-205ENST00000447608 MYCP01106 439 aaPredicted RBP9.99□□□□□ -0.81
COL11A1-205ENST00000447608 VAMP1P23763 118 aa9.99□□□□□ -0.81
COL11A1-205ENST00000447608 FAM163AQ96GL9 167 aaPredicted RBP9.99□□□□□ -0.81
COL11A1-205ENST00000447608 ZNF358Q9NW07 568 aa9.99□□□□□ -0.81
COL11A1-205ENST00000447608 SCTRP47872 440 aa9.98□□□□□ -0.81
COL11A1-205ENST00000447608 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
COL11A1-205ENST00000447608 TRMT44Q8IYL2 757 aaKnown RBP9.98□□□□□ -0.81
COL11A1-205ENST00000447608 CDV3Q9UKY7 258 aaKnown RBP9.98□□□□□ -0.81
COL11A1-205ENST00000447608 FCF1Q9Y324 198 aaKnown RBP9.98□□□□□ -0.81
COL11A1-205ENST00000447608 SH3BP2P78314 561 aa9.97□□□□□ -0.81
COL11A1-205ENST00000447608 KCTD15Q96SI1 283 aaPredicted RBP9.97□□□□□ -0.81
COL11A1-205ENST00000447608 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
COL11A1-205ENST00000447608 S1PR4O95977 384 aa9.96□□□□□ -0.82
COL11A1-205ENST00000447608 TJAP1Q5JTD0 557 aa9.96□□□□□ -0.82
COL11A1-205ENST00000447608 HELQQ8TDG4 1101 aa9.96□□□□□ -0.82
COL11A1-205ENST00000447608 COL26A1Q96A83 441 aa9.96□□□□□ -0.82
COL11A1-205ENST00000447608 TMEM229AB2RXF0 380 aa9.95□□□□□ -0.82
COL11A1-205ENST00000447608 IGFBP4P22692 258 aa9.95□□□□□ -0.82
COL11A1-205ENST00000447608 EAPPQ56P03 285 aaPredicted RBP9.95□□□□□ -0.82
COL11A1-205ENST00000447608 RGL4Q8IZJ4 473 aa9.95□□□□□ -0.82
COL11A1-205ENST00000447608 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
COL11A1-205ENST00000447608 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
COL11A1-205ENST00000447608 ERVH48-1M5A8F1 160 aa9.94□□□□□ -0.82
COL11A1-205ENST00000447608 STAU1O95793 577 aaKnown RBP9.94□□□□□ -0.82
COL11A1-205ENST00000447608 RECKO95980 971 aa9.94□□□□□ -0.82
COL11A1-205ENST00000447608 COL19A1Q14993 1142 aa9.94□□□□□ -0.82
COL11A1-205ENST00000447608 LHX8Q68G74 356 aa9.94□□□□□ -0.82
COL11A1-205ENST00000447608 NYAP1Q6ZVC0 841 aa9.94□□□□□ -0.82
COL11A1-205ENST00000447608 TNS4Q8IZW8 715 aa9.94□□□□□ -0.82
COL11A1-205ENST00000447608 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
COL11A1-205ENST00000447608 SCG3Q8WXD2 468 aaKnown RBP9.94□□□□□ -0.82
COL11A1-205ENST00000447608 FOXO3O43524 673 aa9.93□□□□□ -0.82
COL11A1-205ENST00000447608 FAM13AO94988 1023 aa9.92□□□□□ -0.82
COL11A1-205ENST00000447608 NPR3P17342 541 aa9.92□□□□□ -0.82
COL11A1-205ENST00000447608 TSNAXIP1Q2TAA8 658 aa9.92□□□□□ -0.82
COL11A1-205ENST00000447608 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
COL11A1-205ENST00000447608 ESF1Q9H501 851 aaKnown RBP9.92□□□□□ -0.82
COL11A1-205ENST00000447608 ATAD2Q6PL18 1390 aa9.91□□□□□ -0.82
COL11A1-205ENST00000447608 P4HBP07237 508 aaKnown RBP9.91□□□□□ -0.82
COL11A1-205ENST00000447608 SCNN1DP51172 638 aa9.91□□□□□ -0.82
COL11A1-205ENST00000447608 VASH1Q7L8A9 365 aaPredicted RBP9.91□□□□□ -0.82
COL11A1-205ENST00000447608 TMC7Q7Z402 723 aa9.91□□□□□ -0.82
COL11A1-205ENST00000447608 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
COL11A1-205ENST00000447608 BACH1O14867 736 aa9.9□□□□□ -0.82
COL11A1-205ENST00000447608 MPSTP25325 297 aa9.9□□□□□ -0.82
COL11A1-205ENST00000447608 GDF10P55107 478 aa9.9□□□□□ -0.82
COL11A1-205ENST00000447608 C8orf37Q96NL8 207 aa9.9□□□□□ -0.82
COL11A1-205ENST00000447608 RBCK1Q9BYM8 510 aa9.9□□□□□ -0.82
COL11A1-205ENST00000447608 SERTAD1Q9UHV2 236 aa9.9□□□□□ -0.82
COL11A1-205ENST00000447608 ERVK-9P63128 1117 aa9.89□□□□□ -0.83
COL11A1-205ENST00000447608 CC2D2BQ6DHV5 1058 aa9.89□□□□□ -0.83
COL11A1-205ENST00000447608 VTI1AQ96AJ9 217 aa9.89□□□□□ -0.83
COL11A1-205ENST00000447608 SAP130Q9H0E3 1048 aa9.89□□□□□ -0.83
COL11A1-205ENST00000447608 TSPAN10Q9H1Z9 355 aaPredicted RBP9.89□□□□□ -0.83
COL11A1-205ENST00000447608 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms