RNA–Protein interactions for RNA: ENST00000446933.1

KNOP1P3-201, Transcript of lysine rich nucleolar protein 1 pseudogene 3, humanhuman

BASIC

Gene KNOP1P3, Length 426 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P3-201ENST00000446933 CDCA7Q9BWT1 371 aaPredicted RBP7.03□□□□□ -1.28
KNOP1P3-201ENST00000446933 KNSTRNQ9Y448 316 aa7.03□□□□□ -1.28
KNOP1P3-201ENST00000446933 STK24Q9Y6E0 443 aa7.03□□□□□ -1.28
KNOP1P3-201ENST00000446933 SRCAPQ6ZRS2 3230 aa7.03□□□□□ -1.28
KNOP1P3-201ENST00000446933 GLI3P10071 1580 aa7.03□□□□□ -1.28
KNOP1P3-201ENST00000446933 SPATA31A1Q5TZJ5 1347 aa7.02□□□□□ -1.28
KNOP1P3-201ENST00000446933 WDR17Q8IZU2 1322 aa7.02□□□□□ -1.28
KNOP1P3-201ENST00000446933 BCL9O00512 1426 aa7.02□□□□□ -1.29
KNOP1P3-201ENST00000446933 CRB1P82279 1406 aa7.02□□□□□ -1.29
KNOP1P3-201ENST00000446933 NCAPD2Q15021 1401 aa7.02□□□□□ -1.29
KNOP1P3-201ENST00000446933 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
KNOP1P3-201ENST00000446933 AXIN2Q9Y2T1 843 aa7.02□□□□□ -1.29
KNOP1P3-201ENST00000446933 THSD7AQ9UPZ6 1657 aa7.02□□□□□ -1.29
KNOP1P3-201ENST00000446933 RGPD5Q99666 1765 aa7.02□□□□□ -1.29
KNOP1P3-201ENST00000446933 ERBB3P21860 1342 aa7.01□□□□□ -1.29
KNOP1P3-201ENST00000446933 FLT4P35916 1363 aa7.01□□□□□ -1.29
KNOP1P3-201ENST00000446933 ZC3H6P61129 1189 aaKnown RBP7.01□□□□□ -1.29
KNOP1P3-201ENST00000446933 PDAP1Q13442 181 aaKnown RBP7.01□□□□□ -1.29
KNOP1P3-201ENST00000446933 PARP4Q9UKK3 1724 aaKnown RBP7.01□□□□□ -1.29
KNOP1P3-201ENST00000446933 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
KNOP1P3-201ENST00000446933 PRKAR2AP13861 404 aaKnown RBP7□□□□□ -1.29
KNOP1P3-201ENST00000446933 HOXC9P31274 260 aa7□□□□□ -1.29
KNOP1P3-201ENST00000446933 NUTM2GQ5VZR2 741 aa7□□□□□ -1.29
KNOP1P3-201ENST00000446933 GGNBP2Q9H3C7 697 aa7□□□□□ -1.29
KNOP1P3-201ENST00000446933 POLKQ9UBT6 870 aa7□□□□□ -1.29
KNOP1P3-201ENST00000446933 ZRANB1Q9UGI0 708 aa7□□□□□ -1.29
KNOP1P3-201ENST00000446933 CCDC125Q86Z20 511 aa6.99□□□□□ -1.29
KNOP1P3-201ENST00000446933 TCP11L2Q8N4U5 519 aa6.99□□□□□ -1.29
KNOP1P3-201ENST00000446933 ZNF579Q8NAF0 562 aaKnown RBP6.99□□□□□ -1.29
KNOP1P3-201ENST00000446933 TSPYL2Q9H2G4 693 aaPredicted RBP6.99□□□□□ -1.29
KNOP1P3-201ENST00000446933 DISP2A7MBM2 1401 aa6.99□□□□□ -1.29
KNOP1P3-201ENST00000446933 WNK3Q9BYP7 1800 aa6.99□□□□□ -1.29
KNOP1P3-201ENST00000446933 PEAK1Q9H792 1746 aa6.98□□□□□ -1.29
KNOP1P3-201ENST00000446933 EVA1CP58658 441 aa6.98□□□□□ -1.29
KNOP1P3-201ENST00000446933 CHRNA2Q15822 529 aa6.98□□□□□ -1.29
KNOP1P3-201ENST00000446933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.98□□□□□ -1.29
KNOP1P3-201ENST00000446933 RGS12O14924 1447 aa6.98□□□□□ -1.29
KNOP1P3-201ENST00000446933 KDRP35968 1356 aa6.97□□□□□ -1.29
KNOP1P3-201ENST00000446933 PARD3Q8TEW0 1356 aa6.97□□□□□ -1.29
KNOP1P3-201ENST00000446933 BRWD3Q6RI45 1802 aa6.97□□□□□ -1.29
KNOP1P3-201ENST00000446933 SOCS7O14512 581 aa6.97□□□□□ -1.29
KNOP1P3-201ENST00000446933 LARP1Q6PKG0 1096 aaKnown RBP6.97□□□□□ -1.29
KNOP1P3-201ENST00000446933 ILDR2Q71H61 639 aa6.97□□□□□ -1.29
KNOP1P3-201ENST00000446933 MORC1Q86VD1 984 aa6.97□□□□□ -1.29
KNOP1P3-201ENST00000446933 RGPD1P0DJD0 1748 aa6.96□□□□□ -1.29
KNOP1P3-201ENST00000446933 KAT6BQ8WYB5 2073 aa6.96□□□□□ -1.29
KNOP1P3-201ENST00000446933 AMPHP49418 695 aa6.96□□□□□ -1.3
KNOP1P3-201ENST00000446933 RALBP1Q15311 655 aa6.96□□□□□ -1.3
KNOP1P3-201ENST00000446933 ANKRD24Q8TF21 1146 aa6.96□□□□□ -1.3
KNOP1P3-201ENST00000446933 ZNF316A6NFI3 1004 aaPredicted RBP6.95□□□□□ -1.3
KNOP1P3-201ENST00000446933 RRS1Q15050 365 aaKnown RBP6.95□□□□□ -1.3
KNOP1P3-201ENST00000446933 HSP90AB2PQ58FF8 381 aa6.95□□□□□ -1.3
KNOP1P3-201ENST00000446933 CHRDL2Q6WN34 429 aa6.95□□□□□ -1.3
KNOP1P3-201ENST00000446933 TOM1L2Q6ZVM7 507 aa6.95□□□□□ -1.3
KNOP1P3-201ENST00000446933 SEPT12Q8IYM1 358 aa6.95□□□□□ -1.3
KNOP1P3-201ENST00000446933 IGSF1Q8N6C5 1336 aa6.95□□□□□ -1.3
KNOP1P3-201ENST00000446933 PRKCSHP14314 528 aaPredicted RBP6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 IL2RBP14784 551 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 NBPF6Q5VWK0 638 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 FAM196AQ6ZSG2 479 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 KRT27Q7Z3Y8 459 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 NBPF4Q96M43 638 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 POLR3GLQ9BT43 218 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 STRN4Q9NRL3 753 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 EMILIN1Q9Y6C2 1016 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 RGPD2P0DJD1 1756 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 SBF2Q86WG5 1849 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 LRRC37A3O60309 1634 aa6.94□□□□□ -1.3
KNOP1P3-201ENST00000446933 OVOS2A0A0G2JMS6 1433 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 PKD1L3Q7Z443 1732 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 COL3A1P02461 1466 aaPredicted RBP6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 RGPD3A6NKT7 1758 aaPredicted RBP6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 RGPD4Q7Z3J3 1758 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 FBLN1P23142 703 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 IL13P35225 146 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 PSEN1P49768 467 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 MTHFSP49914 203 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 NBR1Q14596 966 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 FAM98CQ17RN3 349 aaKnown RBP6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 PIP4P2Q8N4L2 257 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 PCDHB8Q9UN66 801 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 PCDHB13Q9Y5F0 798 aa6.93□□□□□ -1.3
KNOP1P3-201ENST00000446933 EXOC5O00471 708 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 PPP2R1AP30153 589 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 EIF4A2Q14240 407 aaKnown RBP6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 DDB1Q16531 1140 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 KIF12Q96FN5 646 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 EYA1Q99502 592 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 MFRPQ9BY79 579 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 NLRP2Q9NX02 1062 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 SHANK3Q9BYB0 1731 aa6.92□□□□□ -1.3
KNOP1P3-201ENST00000446933 SOX12O15370 315 aa6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 CSB-PGBD3P0DP91 1061 aa6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 HMGB2P26583 209 aaKnown RBP6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 DDX10Q13206 875 aaKnown RBP6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 TPRNQ4KMQ1 711 aa6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 AMOTQ4VCS5 1084 aa6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 CC2D1BQ5T0F9 858 aaKnown RBP6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 UPF1Q92900 1129 aaKnown RBP eCLIP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms