RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 LRRFIP2Q9Y608 721 aaKnown RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 EVC2Q86UK5 1308 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 SMC2O95347 1197 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 OS9Q13438 667 aaPredicted RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 SAFB2Q14151 953 aaKnown RBP eCLIP5.95□□□□□ -1.461e-6■■■□□ 15
HERC1-201ENST00000443617 BICD2Q8TD16 824 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 RASSF4Q9H2L5 321 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 SLC4A10Q6U841 1118 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 LARP1BQ659C4 914 aaKnown RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 ZNF215Q9UL58 517 aaPredicted RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 ABCA10Q8WWZ4 1543 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 ABCA5Q8WWZ7 1642 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 PDRG1Q9NUG6 133 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 SPAG9O60271 1321 aaKnown RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 COL17A1Q9UMD9 1497 aaPredicted RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 KANK1Q14678 1352 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 TROQ12816 1431 aaPredicted RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 TUBB4AP04350 444 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 TMEM87AQ8NBN3 555 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 ZSCAN31Q96LW9 406 aaPredicted RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 TRIM35Q9UPQ4 493 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 KMT5BQ4FZB7 885 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 RPAP2Q8IXW5 612 aaPredicted RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 ZFP91Q96JP5 570 aaPredicted RBP5.94□□□□□ -1.46
HERC1-201ENST00000443617 SRCIN1Q9C0H9 1055 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 ASXL1Q8IXJ9 1541 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 MAGI2Q86UL8 1455 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 PRKAR2BP31323 418 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 ZNF165P49910 485 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 SLFNL1Q499Z3 407 aa5.94□□□□□ -1.46
HERC1-201ENST00000443617 SLU7O95391 586 aaKnown RBP5.93□□□□□ -1.46
HERC1-201ENST00000443617 SLC20A2Q08357 652 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 SCAND2PQ9GZW5 306 aaPredicted RBP5.93□□□□□ -1.46
HERC1-201ENST00000443617 H3BQV1 296 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 IFFO2Q5TF58 517 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 HDGFL2Q7Z4V5 671 aaPredicted RBP5.93□□□□□ -1.46
HERC1-201ENST00000443617 LEKR1Q6ZMV7 388 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 KCNF1Q9H3M0 494 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 A0A1B0GUL7 405 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 KRT85P78386 507 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 ESYT1Q9BSJ8 1104 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 CABP2Q9NPB3 220 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 CYP46A1Q9Y6A2 500 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 ANKRD36BQ8N2N9 1353 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 CLGNO14967 610 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 SPATA32Q96LK8 384 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 BIVM-ERCC5R4GMW8 1640 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 LUZP1Q86V48 1076 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 ZKSCAN1P17029 563 aaPredicted RBP5.93□□□□□ -1.46
HERC1-201ENST00000443617 NFE2L2Q16236 605 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 AXDND1Q5T1B0 1012 aaPredicted RBP5.93□□□□□ -1.46
HERC1-201ENST00000443617 HNRNPH2P55795 449 aaKnown RBP5.93□□□□□ -1.46
HERC1-201ENST00000443617 GPATCH3Q96I76 525 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 LMAN1P49257 510 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 STK26Q9P289 416 aa5.93□□□□□ -1.46
HERC1-201ENST00000443617 GNAI2P04899 355 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 GSDMDP57764 484 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 TSHZ3Q63HK5 1081 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 SFPQP23246 707 aaKnown RBP eCLIP5.92□□□□□ -1.46
HERC1-201ENST00000443617 SIRT2Q8IXJ6 389 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 CEP57L1Q8IYX8 460 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 PSMA5P28066 241 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 GSPT1P15170 499 aaKnown RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 STX1AQ16623 288 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 ANKRD44Q8N8A2 993 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 JPH4Q96JJ6 628 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 SENP3Q9H4L4 574 aaPredicted RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 CBX8Q9HC52 389 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 POLA1P09884 1462 aaPredicted RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 RUFY2Q8WXA3 655 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 DDX19AQ9NUU7 478 aaKnown RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 CDK13Q14004 1512 aaKnown RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 CFAP43Q8NDM7 1665 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 SYT1P21579 422 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 PDE1AP54750 535 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 LRMPQ12912 555 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 HSP90B2PQ58FF3 399 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 FBXO38Q6PIJ6 1188 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 VAMP4O75379 141 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 ANO6Q4KMQ2 910 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 CUL4AQ13619 759 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 EFCAB2Q5VUJ9 269 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 KRBA2Q6ZNG9 492 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 CCDC73Q6ZRK6 1079 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 MYCBPQ99417 103 aaPredicted RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 SDF4Q9BRK5 362 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 KINO60870 393 aaKnown RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 F13A1P00488 732 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 SETQ01105 290 aaPredicted RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 SRRTQ9BXP5 876 aaKnown RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 LOC102724159A0A0B4J2E5 919 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 PWP2Q15269 919 aaKnown RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 TWISTNBQ3B726 338 aaPredicted RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 TTC31Q49AM3 519 aaPredicted RBP5.92□□□□□ -1.46
HERC1-201ENST00000443617 GGNBP2Q9H3C7 697 aa5.92□□□□□ -1.46
HERC1-201ENST00000443617 NUP160Q12769 1436 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 GPATCH8Q9UKJ3 1502 aaKnown RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms