RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 SENP7Q9BQF6 1050 aa5.08□□□□□ -1.6
R3HDM1-209ENST00000441871 PRKD2Q9BZL6 878 aa5.08□□□□□ -1.6
R3HDM1-209ENST00000441871 ARHGEF10LQ9HCE6 1279 aa5.08□□□□□ -1.6
R3HDM1-209ENST00000441871 FBXO9Q9UK97 447 aaPredicted RBP5.08□□□□□ -1.6
R3HDM1-209ENST00000441871 NUB1Q9Y5A7 615 aa5.08□□□□□ -1.6
R3HDM1-209ENST00000441871 SETD1BQ9UPS6 1966 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 TLL1O43897 1013 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 STK10O94804 968 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 FMNL1O95466 1100 aaPredicted RBP5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 VAMP1P23763 118 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 NUTM1Q86Y26 1132 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 SCUBE3Q8IX30 993 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 SCYL1Q96KG9 808 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 SLC6A16Q9GZN6 736 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 TMX4Q9H1E5 349 aaPredicted RBP5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 SWAP70Q9UH65 585 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 FRMD4BQ9Y2L6 1034 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 NOP58Q9Y2X3 529 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 SH3BP1Q9Y3L3 701 aa5.07□□□□□ -1.6
R3HDM1-209ENST00000441871 GOLGA6CA6NDK9 693 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 GOLGA6BA6NDN3 693 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 SPDYE5A6NIY4 337 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 GOLGA6DP0CG33 693 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 USP46P62068 366 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 BIRC2Q13490 618 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 HDAC1Q13547 482 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 SETDB1Q15047 1291 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 Q3C1V9 767 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 NOM1Q5C9Z4 860 aaKnown RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 GET4Q7L5D6 327 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 CREBRFQ8IUR6 639 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 HELBQ8NG08 1087 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 ANP32BQ92688 251 aaKnown RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 GLMNQ92990 594 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 TRIM44Q96DX7 344 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 SPSB2Q99619 263 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 BSDC1Q9NW68 430 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 CUEDC1Q9NWM3 386 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 GOLGA6AQ9NYA3 693 aa5.06□□□□□ -1.6
R3HDM1-209ENST00000441871 RPGRIP1LQ68CZ1 1315 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 HOXA2O43364 376 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 S1PR4O95977 384 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 CD46P15529 392 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 SRPK2P78362 688 aaKnown RBP5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 AMHR2Q16671 573 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 MKL1Q969V6 931 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 BRINP2Q9C0B6 783 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 FEZ2Q9UHY8 353 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 HDAC5Q9UQL6 1122 aa5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 V9GY48 417 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-209ENST00000441871 CFAP69A5D8W1 941 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 HSP90AA1P07900 732 aaKnown RBP5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 ERCC5P28715 1186 aaPredicted RBP5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 LAPTM4AQ15012 233 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 CCDC144BQ3MJ40 725 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 MORN1Q5T089 497 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 NPAS4Q8IUM7 802 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 MSL3Q8N5Y2 521 aaKnown RBP5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 OTUD6BQ8N6M0 293 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 ANKLE1Q8NAG6 615 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 RPS6KC1Q96S38 1066 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 NRBP1Q9UHY1 535 aa5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 TPX2Q9ULW0 747 aaKnown RBP5.04□□□□□ -1.6
R3HDM1-209ENST00000441871 CCDC189A1A4V9 331 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 RNF223E7ERA6 249 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 SLC19A1P41440 591 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 MARSP56192 900 aaKnown RBP5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 XPCQ01831 940 aaPredicted RBP5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 NBPF9Q3BBW0 867 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 PLEKHG6Q3KR16 790 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 SH3D19Q5HYK7 790 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 ZCRB1Q8TBF4 217 aaKnown RBP5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 TANGO6Q9C0B7 1094 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 FAM217BQ9NTX9 383 aaPredicted RBP5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 SLC27A5Q9Y2P5 690 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 TBX22Q9Y458 520 aa5.03□□□□□ -1.6
R3HDM1-209ENST00000441871 POM121CA8CG34 1229 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 PPEF1O14829 653 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 ZBTB24O43167 697 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 RECKO95980 971 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 SCP2P22307 547 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 SSTR3P32745 418 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 TBX4P57082 545 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 LMOD3Q0VAK6 560 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 TCEAL1Q15170 157 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 ICE2Q659A1 982 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 Q6ZNB5 142 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 DDX46Q7L014 1031 aaKnown RBP5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 TRIM34Q9BYJ4 488 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 CEP126Q9P2H0 1117 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 G3BP2Q9UN86 482 aaKnown RBP5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 IGF1RP08069 1367 aa5.02□□□□□ -1.61
R3HDM1-209ENST00000441871 GFRA3O60609 400 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 APPP05067 770 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 EVA1CP58658 441 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 POU5F1Q01860 360 aaKnown RBP5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 DIXDC1Q155Q3 683 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 CFAP70Q5T0N1 1121 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms