RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.16
EBF3-203ENST00000440978 TNS2Q63HR2 1409 aa16.02■□□□□ 0.15
EBF3-203ENST00000440978 EXOC5O00471 708 aa16.01■□□□□ 0.15
EBF3-203ENST00000440978 PDE3BQ13370 1112 aa16.01■□□□□ 0.15
EBF3-203ENST00000440978 NUDCQ9Y266 331 aa16.01■□□□□ 0.15
EBF3-203ENST00000440978 OVOS2A0A0G2JMS6 1433 aa16.01■□□□□ 0.15
EBF3-203ENST00000440978 KDRP35968 1356 aa16■□□□□ 0.15
EBF3-203ENST00000440978 MEGF6O75095 1541 aa16■□□□□ 0.15
EBF3-203ENST00000440978 EP400Q96L91 3159 aa15.99■□□□□ 0.15
EBF3-203ENST00000440978 SULT6B1Q6IMI4 303 aa15.98■□□□□ 0.15
EBF3-203ENST00000440978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
EBF3-203ENST00000440978 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
EBF3-203ENST00000440978 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
EBF3-203ENST00000440978 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
EBF3-203ENST00000440978 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
EBF3-203ENST00000440978 BCL9O00512 1426 aa15.95■□□□□ 0.14
EBF3-203ENST00000440978 AEBP1Q8IUX7 1158 aa15.95■□□□□ 0.14
EBF3-203ENST00000440978 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
EBF3-203ENST00000440978 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
EBF3-203ENST00000440978 AMOTQ4VCS5 1084 aa15.94■□□□□ 0.14
EBF3-203ENST00000440978 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
EBF3-203ENST00000440978 MARCH10Q8NA82 808 aaPredicted RBP15.94■□□□□ 0.14
EBF3-203ENST00000440978 SHANK3Q9BYB0 1731 aa15.94■□□□□ 0.14
EBF3-203ENST00000440978 HMOX1P09601 288 aa15.93■□□□□ 0.14
EBF3-203ENST00000440978 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
EBF3-203ENST00000440978 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.14
EBF3-203ENST00000440978 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
EBF3-203ENST00000440978 FCHSD2O94868 740 aa15.92■□□□□ 0.14
EBF3-203ENST00000440978 DDX54Q8TDD1 881 aaKnown RBP15.91■□□□□ 0.14
EBF3-203ENST00000440978 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
EBF3-203ENST00000440978 FAM182BQ5T319 152 aa15.9■□□□□ 0.14
EBF3-203ENST00000440978 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
EBF3-203ENST00000440978 CCDC125Q86Z20 511 aa15.9■□□□□ 0.14
EBF3-203ENST00000440978 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
EBF3-203ENST00000440978 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
EBF3-203ENST00000440978 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
EBF3-203ENST00000440978 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
EBF3-203ENST00000440978 IFNL2Q8IZJ0 200 aa15.89■□□□□ 0.13
EBF3-203ENST00000440978 SOCS7O14512 581 aa15.88■□□□□ 0.13
EBF3-203ENST00000440978 CYP27B1O15528 508 aa15.88■□□□□ 0.13
EBF3-203ENST00000440978 PHKG2P15735 406 aa15.88■□□□□ 0.13
EBF3-203ENST00000440978 PRKAR2BP31323 418 aa15.88■□□□□ 0.13
EBF3-203ENST00000440978 NEFMP07197 916 aa15.87■□□□□ 0.13
EBF3-203ENST00000440978 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
EBF3-203ENST00000440978 NKX1-1Q15270 411 aaPredicted RBP15.87■□□□□ 0.13
EBF3-203ENST00000440978 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
EBF3-203ENST00000440978 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
EBF3-203ENST00000440978 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
EBF3-203ENST00000440978 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.13
EBF3-203ENST00000440978 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
EBF3-203ENST00000440978 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
EBF3-203ENST00000440978 AKAP4Q5JQC9 854 aa15.85■□□□□ 0.13
EBF3-203ENST00000440978 MRS2Q9HD23 443 aa15.85■□□□□ 0.13
EBF3-203ENST00000440978 SF3B2Q13435 895 aaKnown RBP15.84■□□□□ 0.13
EBF3-203ENST00000440978 MTHFSDQ2M296 383 aaKnown RBP15.84■□□□□ 0.13
EBF3-203ENST00000440978 DCAF5Q96JK2 942 aa15.84■□□□□ 0.13
EBF3-203ENST00000440978 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
EBF3-203ENST00000440978 DOT1LQ8TEK3 1739 aa15.84■□□□□ 0.13
EBF3-203ENST00000440978 TNS1Q9HBL0 1735 aaKnown RBP15.83■□□□□ 0.13
EBF3-203ENST00000440978 TRIM37O94972 964 aa15.83■□□□□ 0.12
EBF3-203ENST00000440978 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
EBF3-203ENST00000440978 PHACTR3Q96KR7 559 aa15.83■□□□□ 0.12
EBF3-203ENST00000440978 PLEKHF1Q96S99 279 aa15.83■□□□□ 0.12
EBF3-203ENST00000440978 MAPK8IP3Q9UPT6 1336 aa15.83■□□□□ 0.12
EBF3-203ENST00000440978 CCER2I3L3R5 266 aa15.82■□□□□ 0.12
EBF3-203ENST00000440978 ADAMTS8Q9UP79 889 aa15.82■□□□□ 0.12
EBF3-203ENST00000440978 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
EBF3-203ENST00000440978 PNISRQ8TF01 805 aaKnown RBP15.81■□□□□ 0.12
EBF3-203ENST00000440978 ACSBG1Q96GR2 724 aa15.81■□□□□ 0.12
EBF3-203ENST00000440978 MAP3K5Q99683 1374 aa15.81■□□□□ 0.12
EBF3-203ENST00000440978 TOGARAM1Q9Y4F4 1720 aa15.81■□□□□ 0.12
EBF3-203ENST00000440978 GNAT3A8MTJ3 354 aa15.8■□□□□ 0.12
EBF3-203ENST00000440978 ERVV-2B6SEH9 535 aa15.8■□□□□ 0.12
EBF3-203ENST00000440978 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
EBF3-203ENST00000440978 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
EBF3-203ENST00000440978 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
EBF3-203ENST00000440978 KCNQ2O43526 872 aa15.79■□□□□ 0.12
EBF3-203ENST00000440978 BAG6P46379 1132 aa15.79■□□□□ 0.12
EBF3-203ENST00000440978 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
EBF3-203ENST00000440978 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
EBF3-203ENST00000440978 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
EBF3-203ENST00000440978 RGPD4Q7Z3J3 1758 aa15.78■□□□□ 0.12
EBF3-203ENST00000440978 SCN11AQ9UI33 1791 aa15.78■□□□□ 0.12
EBF3-203ENST00000440978 HTATSF1O43719 755 aaKnown RBP15.78■□□□□ 0.12
EBF3-203ENST00000440978 APBA3O96018 575 aa15.78■□□□□ 0.12
EBF3-203ENST00000440978 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
EBF3-203ENST00000440978 MPRIPQ6WCQ1 1025 aa15.78■□□□□ 0.12
EBF3-203ENST00000440978 BTAF1O14981 1849 aa15.78■□□□□ 0.12
EBF3-203ENST00000440978 ITGB4P16144 1822 aa15.78■□□□□ 0.12
EBF3-203ENST00000440978 PLSCR1O15162 318 aa15.77■□□□□ 0.12
EBF3-203ENST00000440978 TMOD3Q9NYL9 352 aa15.77■□□□□ 0.12
EBF3-203ENST00000440978 RNMTO43148 476 aaKnown RBP15.76■□□□□ 0.11
EBF3-203ENST00000440978 PTF1AQ7RTS3 328 aa15.76■□□□□ 0.11
EBF3-203ENST00000440978 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
EBF3-203ENST00000440978 MRC1P22897 1456 aa15.76■□□□□ 0.11
EBF3-203ENST00000440978 CABP4P57796 275 aa15.75■□□□□ 0.11
EBF3-203ENST00000440978 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
EBF3-203ENST00000440978 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
EBF3-203ENST00000440978 CEMIPQ8WUJ3 1361 aa15.75■□□□□ 0.11
EBF3-203ENST00000440978 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms