RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 SH3RF1Q7Z6J0 888 aa9.78□□□□□ -0.84
CHD6-204ENST00000440647 FAM174AQ8TBP5 190 aa9.78□□□□□ -0.84
CHD6-204ENST00000440647 HMX1Q9NP08 348 aaPredicted RBP9.78□□□□□ -0.84
CHD6-204ENST00000440647 FKBPLQ9UIM3 349 aa9.78□□□□□ -0.84
CHD6-204ENST00000440647 CAPN5O15484 640 aaPredicted RBP9.77□□□□□ -0.85
CHD6-204ENST00000440647 LCE2AQ5TA79 106 aaPredicted RBP9.77□□□□□ -0.85
CHD6-204ENST00000440647 PDXDC2PQ6P474 469 aa9.77□□□□□ -0.85
CHD6-204ENST00000440647 SH3BP5LQ7L8J4 393 aa9.77□□□□□ -0.85
CHD6-204ENST00000440647 EPS8L1Q8TE68 723 aa9.77□□□□□ -0.85
CHD6-204ENST00000440647 HECW2Q9P2P5 1572 aa9.76□□□□□ -0.85
CHD6-204ENST00000440647 SNRPBP14678 240 aaKnown RBP9.76□□□□□ -0.85
CHD6-204ENST00000440647 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
CHD6-204ENST00000440647 ZC3H4Q9UPT8 1303 aaKnown RBP9.76□□□□□ -0.85
CHD6-204ENST00000440647 ARAP3Q8WWN8 1544 aa9.76□□□□□ -0.85
CHD6-204ENST00000440647 ARXQ96QS3 562 aa9.75□□□□□ -0.85
CHD6-204ENST00000440647 PHLDB1Q86UU1 1377 aa9.75□□□□□ -0.85
CHD6-204ENST00000440647 FHOD3Q2V2M9 1422 aa9.74□□□□□ -0.85
CHD6-204ENST00000440647 EFCAB5A4FU69 1503 aa9.74□□□□□ -0.85
CHD6-204ENST00000440647 PNMA1Q8ND90 353 aa9.74□□□□□ -0.85
CHD6-204ENST00000440647 CDK15Q96Q40 435 aa9.74□□□□□ -0.85
CHD6-204ENST00000440647 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
CHD6-204ENST00000440647 NUP153P49790 1475 aaKnown RBP9.73□□□□□ -0.85
CHD6-204ENST00000440647 NEO1Q92859 1461 aa9.73□□□□□ -0.85
CHD6-204ENST00000440647 CFAP74Q9C0B2 1584 aa9.73□□□□□ -0.85
CHD6-204ENST00000440647 TERTO14746 1132 aaKnown RBP9.73□□□□□ -0.85
CHD6-204ENST00000440647 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
CHD6-204ENST00000440647 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
CHD6-204ENST00000440647 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
CHD6-204ENST00000440647 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
CHD6-204ENST00000440647 TRIM34Q9BYJ4 488 aa9.73□□□□□ -0.85
CHD6-204ENST00000440647 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
CHD6-204ENST00000440647 PTK2Q05397 1052 aa9.71□□□□□ -0.86
CHD6-204ENST00000440647 ARID5BQ14865 1188 aa9.71□□□□□ -0.86
CHD6-204ENST00000440647 GJD4Q96KN9 370 aaPredicted RBP9.71□□□□□ -0.86
CHD6-204ENST00000440647 ARHGAP9Q9BRR9 750 aa9.71□□□□□ -0.86
CHD6-204ENST00000440647 GPSM3Q9Y4H4 160 aa9.71□□□□□ -0.86
CHD6-204ENST00000440647 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
CHD6-204ENST00000440647 SOCS7O14512 581 aa9.7□□□□□ -0.86
CHD6-204ENST00000440647 TRMT44Q8IYL2 757 aaKnown RBP9.7□□□□□ -0.86
CHD6-204ENST00000440647 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
CHD6-204ENST00000440647 FRMPD1Q5SYB0 1578 aa9.7□□□□□ -0.86
CHD6-204ENST00000440647 WIPF1O43516 503 aa9.69□□□□□ -0.86
CHD6-204ENST00000440647 RAPGEF3O95398 923 aa9.69□□□□□ -0.86
CHD6-204ENST00000440647 ADH1CP00326 375 aa9.69□□□□□ -0.86
CHD6-204ENST00000440647 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
CHD6-204ENST00000440647 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
CHD6-204ENST00000440647 BCORL1Q5H9F3 1711 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 TTC37Q6PGP7 1564 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 ARHGEF40Q8TER5 1519 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 ARID4BQ4LE39 1312 aaPredicted RBP9.68□□□□□ -0.86
CHD6-204ENST00000440647 GRM5P41594 1212 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 NNTQ13423 1086 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 NPAS3Q8IXF0 933 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 OCSTAMPQ9BR26 566 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 MAP4K5Q9Y4K4 846 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 RICTORQ6R327 1708 aa9.68□□□□□ -0.86
CHD6-204ENST00000440647 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
CHD6-204ENST00000440647 HECW1Q76N89 1606 aa9.67□□□□□ -0.86
CHD6-204ENST00000440647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD6-204ENST00000440647 NR5A1Q13285 461 aa9.67□□□□□ -0.86
CHD6-204ENST00000440647 SCARF1Q14162 830 aa9.67□□□□□ -0.86
CHD6-204ENST00000440647 MTMR14Q8NCE2 650 aa9.67□□□□□ -0.86
CHD6-204ENST00000440647 NXF1Q9UBU9 619 aaKnown RBP9.67□□□□□ -0.86
CHD6-204ENST00000440647 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
CHD6-204ENST00000440647 FANCAO15360 1455 aa9.66□□□□□ -0.86
CHD6-204ENST00000440647 DENND4BO75064 1496 aaPredicted RBP9.66□□□□□ -0.86
CHD6-204ENST00000440647 UBTFP17480 764 aaKnown RBP9.66□□□□□ -0.86
CHD6-204ENST00000440647 VASH1Q7L8A9 365 aaPredicted RBP9.66□□□□□ -0.86
CHD6-204ENST00000440647 STK17AQ9UEE5 414 aa9.66□□□□□ -0.86
CHD6-204ENST00000440647 MADDQ8WXG6 1647 aa9.66□□□□□ -0.86
CHD6-204ENST00000440647 PTPRMP28827 1452 aa9.66□□□□□ -0.86
CHD6-204ENST00000440647 AKNAQ7Z591 1439 aa9.65□□□□□ -0.86
CHD6-204ENST00000440647 APBB1O00213 710 aa9.65□□□□□ -0.86
CHD6-204ENST00000440647 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
CHD6-204ENST00000440647 ADAM32Q8TC27 787 aa9.65□□□□□ -0.86
CHD6-204ENST00000440647 MYO5CQ9NQX4 1742 aa9.65□□□□□ -0.87
CHD6-204ENST00000440647 FMN1Q68DA7 1419 aa9.65□□□□□ -0.87
CHD6-204ENST00000440647 RIMS1Q86UR5 1692 aaKnown RBP9.64□□□□□ -0.87
CHD6-204ENST00000440647 BMP1P13497 986 aa9.64□□□□□ -0.87
CHD6-204ENST00000440647 WDR4P57081 412 aaKnown RBP9.64□□□□□ -0.87
CHD6-204ENST00000440647 CDV3Q9UKY7 258 aaKnown RBP9.64□□□□□ -0.87
CHD6-204ENST00000440647 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
CHD6-204ENST00000440647 ZFYVE16Q7Z3T8 1539 aa9.63□□□□□ -0.87
CHD6-204ENST00000440647 SLC10A4Q96EP9 437 aa9.63□□□□□ -0.87
CHD6-204ENST00000440647 ZFP42Q96MM3 310 aa9.63□□□□□ -0.87
CHD6-204ENST00000440647 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
CHD6-204ENST00000440647 MRPL14Q6P1L8 145 aaKnown RBP9.62□□□□□ -0.87
CHD6-204ENST00000440647 IRF7Q92985 503 aa9.62□□□□□ -0.87
CHD6-204ENST00000440647 NDUFB9Q9Y6M9 179 aa9.62□□□□□ -0.87
CHD6-204ENST00000440647 KIF14Q15058 1648 aa9.62□□□□□ -0.87
CHD6-204ENST00000440647 POGZQ7Z3K3 1410 aa9.62□□□□□ -0.87
CHD6-204ENST00000440647 ZBBXA8MT70 800 aa9.61□□□□□ -0.87
CHD6-204ENST00000440647 NR3C2P08235 984 aa9.61□□□□□ -0.87
CHD6-204ENST00000440647 TIMP2P16035 220 aa9.61□□□□□ -0.87
CHD6-204ENST00000440647 CDK11AQ9UQ88 783 aaPredicted RBP9.61□□□□□ -0.87
CHD6-204ENST00000440647 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
CHD6-204ENST00000440647 MAGI2Q86UL8 1455 aa9.6□□□□□ -0.87
CHD6-204ENST00000440647 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
CHD6-204ENST00000440647 FAM181BA6NEQ2 426 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms