RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 SSX2IPQ9Y2D8 614 aa8.91□□□□□ -0.98
TSC1-203ENST00000440111 POGZQ7Z3K3 1410 aa8.91□□□□□ -0.98
TSC1-203ENST00000440111 PDCL3Q9H2J4 239 aa8.91□□□□□ -0.98
TSC1-203ENST00000440111 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
TSC1-203ENST00000440111 MSH5O43196 834 aa8.91□□□□□ -0.98
TSC1-203ENST00000440111 TRHP20396 242 aaPredicted RBP8.91□□□□□ -0.98
TSC1-203ENST00000440111 ARHGAP31Q2M1Z3 1444 aa8.91□□□□□ -0.98
TSC1-203ENST00000440111 SART3Q15020 963 aaKnown RBP8.91□□□□□ -0.98
TSC1-203ENST00000440111 ANAPC15P60006 121 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 TCP11L2Q8N4U5 519 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 CDK5RAP3Q96JB5 506 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 NUCB2P80303 420 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 STIM1Q13586 685 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 FILIP1LQ4L180 1135 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 POLR3GO15318 223 aaPredicted RBP8.9□□□□□ -0.98
TSC1-203ENST00000440111 TNNT1P13805 278 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 CAVIN1Q6NZI2 390 aaKnown RBP8.9□□□□□ -0.98
TSC1-203ENST00000440111 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.9□□□□□ -0.98
TSC1-203ENST00000440111 GIMAP7Q8NHV1 300 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 NSD3Q9BZ95 1437 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 AFAP1Q8N556 730 aa8.9□□□□□ -0.98
TSC1-203ENST00000440111 SREK1Q8WXA9 508 aaKnown RBP8.9□□□□□ -0.98
TSC1-203ENST00000440111 SHROOM2Q13796 1616 aa8.9□□□□□ -0.99
TSC1-203ENST00000440111 ERC1Q8IUD2 1116 aa8.9□□□□□ -0.99
TSC1-203ENST00000440111 SSR1P43307 286 aaKnown RBP8.9□□□□□ -0.99
TSC1-203ENST00000440111 MVPQ14764 893 aaKnown RBP8.9□□□□□ -0.99
TSC1-203ENST00000440111 GPATCH11Q8N954 259 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
TSC1-203ENST00000440111 KIF24Q5T7B8 1368 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 SAMD9LQ8IVG5 1584 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.89□□□□□ -0.99
TSC1-203ENST00000440111 OPA1O60313 960 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 PAXIP1Q6ZW49 1069 aaPredicted RBP8.89□□□□□ -0.99
TSC1-203ENST00000440111 SEPT10Q9P0V9 454 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 CDC45O75419 566 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 EVA1CP58658 441 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 PRPF31Q8WWY3 499 aaKnown RBP8.89□□□□□ -0.99
TSC1-203ENST00000440111 ASXL2Q76L83 1435 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 FERP16591 822 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
TSC1-203ENST00000440111 SLKQ9H2G2 1235 aaPredicted RBP8.89□□□□□ -0.99
TSC1-203ENST00000440111 CNGA1P29973 690 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 CFAP70Q5T0N1 1121 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 ZNF592Q92610 1267 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 SF3B2Q13435 895 aaKnown RBP8.88□□□□□ -0.99
TSC1-203ENST00000440111 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 MCTP1Q6DN14 999 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 DUSP27Q5VZP5 1158 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 HOOK3Q86VS8 718 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 FAM43AQ8N2R8 423 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.88□□□□□ -0.99
TSC1-203ENST00000440111 HDAC1Q13547 482 aaPredicted RBP8.88□□□□□ -0.99
TSC1-203ENST00000440111 DDX12PQ92771 950 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 PLEKHH1Q9ULM0 1364 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 SHTN1A0MZ66 631 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 DDX58O95786 925 aaKnown RBP8.88□□□□□ -0.99
TSC1-203ENST00000440111 SASS6Q6UVJ0 657 aa8.88□□□□□ -0.99
TSC1-203ENST00000440111 NOC2LQ9Y3T9 749 aaKnown RBP8.87□□□□□ -0.99
TSC1-203ENST00000440111 TRAPPC8Q9Y2L5 1435 aa8.87□□□□□ -0.99
TSC1-203ENST00000440111 TET3O43151 1660 aa8.87□□□□□ -0.99
TSC1-203ENST00000440111 RPAP2Q8IXW5 612 aaPredicted RBP8.87□□□□□ -0.99
TSC1-203ENST00000440111 IFT57Q9NWB7 429 aa8.87□□□□□ -0.99
TSC1-203ENST00000440111 MRE11P49959 708 aa8.87□□□□□ -0.99
TSC1-203ENST00000440111 IRX3P78415 501 aaPredicted RBP8.87□□□□□ -0.99
TSC1-203ENST00000440111 NFXL1Q6ZNB6 911 aa8.87□□□□□ -0.99
TSC1-203ENST00000440111 TRAK1Q9UPV9 953 aa8.87□□□□□ -0.99
TSC1-203ENST00000440111 CCDC73Q6ZRK6 1079 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 MYO5CQ9NQX4 1742 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 TTC5Q8N0Z6 440 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 ZFYVE16Q7Z3T8 1539 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 JAKMIP3Q5VZ66 844 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 IKQ13123 557 aaPredicted RBP8.86□□□□□ -0.99
TSC1-203ENST00000440111 INTS3Q68E01 1043 aaKnown RBP8.86□□□□□ -0.99
TSC1-203ENST00000440111 TTC21BQ7Z4L5 1316 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
TSC1-203ENST00000440111 CCDC150Q8NCX0 1101 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 GAS2L2Q8NHY3 880 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 UBE2Q2Q8WVN8 375 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 NOS1P29475 1434 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 PIBF1Q8WXW3 757 aa8.86□□□□□ -0.99
TSC1-203ENST00000440111 LETM1O95202 739 aaPredicted RBP8.85□□□□□ -0.99
TSC1-203ENST00000440111 ATF7IPQ6VMQ6 1270 aa8.85□□□□□ -0.99
TSC1-203ENST00000440111 IPO4Q8TEX9 1081 aaKnown RBP8.85□□□□□ -0.99
TSC1-203ENST00000440111 PPP1R12BO60237 982 aaPredicted RBP8.85□□□□□ -0.99
TSC1-203ENST00000440111 GNAI3P08754 354 aa8.85□□□□□ -0.99
TSC1-203ENST00000440111 PPP4R3AQ6IN85 833 aa8.85□□□□□ -0.99
TSC1-203ENST00000440111 RALYLQ86SE5 291 aaKnown RBP8.85□□□□□ -0.99
TSC1-203ENST00000440111 SMC2O95347 1197 aa8.85□□□□□ -0.99
TSC1-203ENST00000440111 MBD3O95983 291 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 SETBP1Q9Y6X0 1596 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 SRCIN1Q9C0H9 1055 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 DACH1Q9UI36 760 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 RIPK4P57078 832 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 CCDC6Q16204 474 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 CEP135Q66GS9 1140 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 CEP112Q8N8E3 955 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 C22orf23Q9BZE7 217 aa8.84□□□□□ -0.99
TSC1-203ENST00000440111 EIF3DO15371 548 aaKnown RBP eCLIP8.84□□□□□ -0.99
TSC1-203ENST00000440111 BMS1Q14692 1282 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms