RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 MSH5O43196 834 aa16.19■□□□□ 0.18
HLA-DOB-206ENST00000438763 COL18A1P39060 1754 aa16.19■□□□□ 0.18
HLA-DOB-206ENST00000438763 CHRNA2Q15822 529 aa16.18■□□□□ 0.18
HLA-DOB-206ENST00000438763 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
HLA-DOB-206ENST00000438763 SLIT2O94813 1529 aa16.18■□□□□ 0.18
HLA-DOB-206ENST00000438763 ERBB3P21860 1342 aa16.18■□□□□ 0.18
HLA-DOB-206ENST00000438763 YY1P25490 414 aa16.17■□□□□ 0.18
HLA-DOB-206ENST00000438763 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
HLA-DOB-206ENST00000438763 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
HLA-DOB-206ENST00000438763 R3HDM1Q15032 1099 aaKnown RBP16.16■□□□□ 0.18
HLA-DOB-206ENST00000438763 KRT27Q7Z3Y8 459 aa16.16■□□□□ 0.18
HLA-DOB-206ENST00000438763 NCAPD2Q15021 1401 aa16.16■□□□□ 0.18
HLA-DOB-206ENST00000438763 IL16Q14005 1332 aa16.16■□□□□ 0.18
HLA-DOB-206ENST00000438763 BAG6P46379 1132 aa16.15■□□□□ 0.18
HLA-DOB-206ENST00000438763 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
HLA-DOB-206ENST00000438763 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
HLA-DOB-206ENST00000438763 ABCA3Q99758 1704 aa16.15■□□□□ 0.18
HLA-DOB-206ENST00000438763 EN1Q05925 392 aaPredicted RBP16.14■□□□□ 0.17
HLA-DOB-206ENST00000438763 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
HLA-DOB-206ENST00000438763 CCDC9Q9Y3X0 531 aaKnown RBP16.14■□□□□ 0.17
HLA-DOB-206ENST00000438763 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
HLA-DOB-206ENST00000438763 MTHFSDQ2M296 383 aaKnown RBP16.13■□□□□ 0.17
HLA-DOB-206ENST00000438763 RGPD5Q99666 1765 aa16.13■□□□□ 0.17
HLA-DOB-206ENST00000438763 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
HLA-DOB-206ENST00000438763 CSB-PGBD3P0DP91 1061 aa16.13■□□□□ 0.17
HLA-DOB-206ENST00000438763 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
HLA-DOB-206ENST00000438763 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
HLA-DOB-206ENST00000438763 CAMTA1Q9Y6Y1 1673 aa16.12■□□□□ 0.17
HLA-DOB-206ENST00000438763 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
HLA-DOB-206ENST00000438763 VPS72Q15906 364 aa16.12■□□□□ 0.17
HLA-DOB-206ENST00000438763 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
HLA-DOB-206ENST00000438763 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
HLA-DOB-206ENST00000438763 A0A0G2JS52 829 aa16.11■□□□□ 0.17
HLA-DOB-206ENST00000438763 MYT1Q01538 1121 aa16.11■□□□□ 0.17
HLA-DOB-206ENST00000438763 WDR17Q8IZU2 1322 aa16.11■□□□□ 0.17
HLA-DOB-206ENST00000438763 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
HLA-DOB-206ENST00000438763 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
HLA-DOB-206ENST00000438763 RCAN3Q9UKA8 241 aa16.1■□□□□ 0.17
HLA-DOB-206ENST00000438763 GTF3C3Q9Y5Q9 886 aa16.1■□□□□ 0.17
HLA-DOB-206ENST00000438763 FAM208AQ9UK61 1670 aaKnown RBP16.09■□□□□ 0.17
HLA-DOB-206ENST00000438763 RGPD2P0DJD1 1756 aa16.09■□□□□ 0.17
HLA-DOB-206ENST00000438763 ONECUT3O60422 494 aaPredicted RBP16.09■□□□□ 0.17
HLA-DOB-206ENST00000438763 FAM182BQ5T319 152 aa16.09■□□□□ 0.17
HLA-DOB-206ENST00000438763 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
HLA-DOB-206ENST00000438763 COL5A2P05997 1499 aaPredicted RBP16.09■□□□□ 0.17
HLA-DOB-206ENST00000438763 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.16
HLA-DOB-206ENST00000438763 EVA1CP58658 441 aa16.08■□□□□ 0.16
HLA-DOB-206ENST00000438763 RAPGEF4Q8WZA2 1011 aa16.08■□□□□ 0.16
HLA-DOB-206ENST00000438763 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.16
HLA-DOB-206ENST00000438763 PLCH1Q4KWH8 1693 aa16.07■□□□□ 0.16
HLA-DOB-206ENST00000438763 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
HLA-DOB-206ENST00000438763 GNAI1P63096 354 aa16.07■□□□□ 0.16
HLA-DOB-206ENST00000438763 CARD10Q9BWT7 1032 aa16.07■□□□□ 0.16
HLA-DOB-206ENST00000438763 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
HLA-DOB-206ENST00000438763 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
HLA-DOB-206ENST00000438763 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 BTG4Q9NY30 223 aa16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 COL14A1Q05707 1796 aaKnown RBP16.06■□□□□ 0.16
HLA-DOB-206ENST00000438763 NEFLP07196 543 aa16.05■□□□□ 0.16
HLA-DOB-206ENST00000438763 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
HLA-DOB-206ENST00000438763 MAP3K5Q99683 1374 aa16.04■□□□□ 0.16
HLA-DOB-206ENST00000438763 FANCIQ9NVI1 1328 aa16.04■□□□□ 0.16
HLA-DOB-206ENST00000438763 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
HLA-DOB-206ENST00000438763 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
HLA-DOB-206ENST00000438763 MCM10Q7L590 875 aa16.04■□□□□ 0.16
HLA-DOB-206ENST00000438763 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
HLA-DOB-206ENST00000438763 CT47B1P0C2W7 299 aaPredicted RBP16.03■□□□□ 0.16
HLA-DOB-206ENST00000438763 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
HLA-DOB-206ENST00000438763 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
HLA-DOB-206ENST00000438763 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
HLA-DOB-206ENST00000438763 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
HLA-DOB-206ENST00000438763 NWD2Q9ULI1 1742 aa16.03■□□□□ 0.16
HLA-DOB-206ENST00000438763 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
HLA-DOB-206ENST00000438763 LAS1LQ9Y4W2 734 aaKnown RBP16.02■□□□□ 0.16
HLA-DOB-206ENST00000438763 CHL1O00533 1208 aa16.01■□□□□ 0.15
HLA-DOB-206ENST00000438763 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
HLA-DOB-206ENST00000438763 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
HLA-DOB-206ENST00000438763 CRB1P82279 1406 aa16.01■□□□□ 0.15
HLA-DOB-206ENST00000438763 MBIPQ9NS73 344 aa16■□□□□ 0.15
HLA-DOB-206ENST00000438763 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
HLA-DOB-206ENST00000438763 MEGF6O75095 1541 aa16■□□□□ 0.15
HLA-DOB-206ENST00000438763 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
HLA-DOB-206ENST00000438763 IL2RBP14784 551 aa15.99■□□□□ 0.15
HLA-DOB-206ENST00000438763 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
HLA-DOB-206ENST00000438763 FKBP8Q14318 412 aa15.99■□□□□ 0.15
HLA-DOB-206ENST00000438763 CEMIPQ8WUJ3 1361 aa15.98■□□□□ 0.15
HLA-DOB-206ENST00000438763 OVOS2A0A0G2JMS6 1433 aa15.98■□□□□ 0.15
HLA-DOB-206ENST00000438763 DISP2A7MBM2 1401 aa15.98■□□□□ 0.15
HLA-DOB-206ENST00000438763 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
HLA-DOB-206ENST00000438763 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
HLA-DOB-206ENST00000438763 NRAPQ86VF7 1730 aa15.97■□□□□ 0.15
HLA-DOB-206ENST00000438763 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
HLA-DOB-206ENST00000438763 PHKG2P15735 406 aa15.97■□□□□ 0.15
HLA-DOB-206ENST00000438763 RARSP54136 660 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms