RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
HLA-DMB-259ENST00000438510 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
HLA-DMB-259ENST00000438510 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
HLA-DMB-259ENST00000438510 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
HLA-DMB-259ENST00000438510 HMOX1P09601 288 aa14.05□□□□□ -0.16
HLA-DMB-259ENST00000438510 TATP17735 454 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMB-259ENST00000438510 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
HLA-DMB-259ENST00000438510 FCHSD2O94868 740 aa14.04□□□□□ -0.16
HLA-DMB-259ENST00000438510 NEFMP07197 916 aa14.04□□□□□ -0.16
HLA-DMB-259ENST00000438510 AEBP1Q8IUX7 1158 aa14.04□□□□□ -0.16
HLA-DMB-259ENST00000438510 PNISRQ8TF01 805 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-259ENST00000438510 TNS2Q63HR2 1409 aa14.04□□□□□ -0.16
HLA-DMB-259ENST00000438510 RXRBP28702 533 aa14.03□□□□□ -0.16
HLA-DMB-259ENST00000438510 FAM98CQ17RN3 349 aaKnown RBP14.03□□□□□ -0.16
HLA-DMB-259ENST00000438510 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
HLA-DMB-259ENST00000438510 A0A0G2JS52 829 aa14.02□□□□□ -0.17
HLA-DMB-259ENST00000438510 MYT1Q01538 1121 aa14.02□□□□□ -0.17
HLA-DMB-259ENST00000438510 MAPK8IP3Q9UPT6 1336 aa14.01□□□□□ -0.17
HLA-DMB-259ENST00000438510 PRKAR2BP31323 418 aa14.01□□□□□ -0.17
HLA-DMB-259ENST00000438510 ADAMTS8Q9UP79 889 aa14.01□□□□□ -0.17
HLA-DMB-259ENST00000438510 ONECUT3O60422 494 aaPredicted RBP14□□□□□ -0.17
HLA-DMB-259ENST00000438510 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
HLA-DMB-259ENST00000438510 DDB1Q16531 1140 aa14□□□□□ -0.17
HLA-DMB-259ENST00000438510 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
HLA-DMB-259ENST00000438510 FAM9BQ8IZU0 186 aa14□□□□□ -0.17
HLA-DMB-259ENST00000438510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14□□□□□ -0.17
HLA-DMB-259ENST00000438510 SPG7Q9UQ90 795 aa14□□□□□ -0.17
HLA-DMB-259ENST00000438510 RGS12O14924 1447 aa13.99□□□□□ -0.17
HLA-DMB-259ENST00000438510 SCN11AQ9UI33 1791 aa13.99□□□□□ -0.17
HLA-DMB-259ENST00000438510 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
HLA-DMB-259ENST00000438510 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
HLA-DMB-259ENST00000438510 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
HLA-DMB-259ENST00000438510 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
HLA-DMB-259ENST00000438510 EXOC5O00471 708 aa13.98□□□□□ -0.17
HLA-DMB-259ENST00000438510 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
HLA-DMB-259ENST00000438510 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
HLA-DMB-259ENST00000438510 SEPT12Q8IYM1 358 aa13.97□□□□□ -0.17
HLA-DMB-259ENST00000438510 GAS2L2Q8NHY3 880 aa13.97□□□□□ -0.17
HLA-DMB-259ENST00000438510 PLEKHF1Q96S99 279 aa13.97□□□□□ -0.17
HLA-DMB-259ENST00000438510 SBF2Q86WG5 1849 aa13.97□□□□□ -0.17
HLA-DMB-259ENST00000438510 ADAMTS7Q9UKP4 1686 aa13.96□□□□□ -0.17
HLA-DMB-259ENST00000438510 PDE3BQ13370 1112 aa13.96□□□□□ -0.17
HLA-DMB-259ENST00000438510 CCDC146Q8IYE0 955 aa13.96□□□□□ -0.17
HLA-DMB-259ENST00000438510 ITGB4P16144 1822 aa13.95□□□□□ -0.18
HLA-DMB-259ENST00000438510 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
HLA-DMB-259ENST00000438510 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMB-259ENST00000438510 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
HLA-DMB-259ENST00000438510 HSP90AB1P08238 724 aaKnown RBP13.94□□□□□ -0.18
HLA-DMB-259ENST00000438510 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
HLA-DMB-259ENST00000438510 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
HLA-DMB-259ENST00000438510 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
HLA-DMB-259ENST00000438510 NHSQ6T4R5 1651 aa13.94□□□□□ -0.18
HLA-DMB-259ENST00000438510 MAP3K5Q99683 1374 aa13.94□□□□□ -0.18
HLA-DMB-259ENST00000438510 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
HLA-DMB-259ENST00000438510 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
HLA-DMB-259ENST00000438510 DDX54Q8TDD1 881 aaKnown RBP13.93□□□□□ -0.18
HLA-DMB-259ENST00000438510 SIPA1L3O60292 1781 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMB-259ENST00000438510 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
HLA-DMB-259ENST00000438510 PHKG2P15735 406 aa13.92□□□□□ -0.18
HLA-DMB-259ENST00000438510 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
HLA-DMB-259ENST00000438510 KRT27Q7Z3Y8 459 aa13.92□□□□□ -0.18
HLA-DMB-259ENST00000438510 GNAT3A8MTJ3 354 aa13.91□□□□□ -0.18
HLA-DMB-259ENST00000438510 CYP27B1O15528 508 aa13.91□□□□□ -0.18
HLA-DMB-259ENST00000438510 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-259ENST00000438510 BCL9O00512 1426 aa13.9□□□□□ -0.18
HLA-DMB-259ENST00000438510 APAF1O14727 1248 aa13.9□□□□□ -0.18
HLA-DMB-259ENST00000438510 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
HLA-DMB-259ENST00000438510 NGEFQ8N5V2 710 aa13.9□□□□□ -0.18
HLA-DMB-259ENST00000438510 MARCH10Q8NA82 808 aaPredicted RBP13.9□□□□□ -0.18
HLA-DMB-259ENST00000438510 RTF1Q92541 710 aaKnown RBP13.9□□□□□ -0.18
HLA-DMB-259ENST00000438510 MRC1P22897 1456 aa13.89□□□□□ -0.19
HLA-DMB-259ENST00000438510 RIPK4P57078 832 aa13.89□□□□□ -0.19
HLA-DMB-259ENST00000438510 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-259ENST00000438510 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
HLA-DMB-259ENST00000438510 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
HLA-DMB-259ENST00000438510 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-259ENST00000438510 BTAF1O14981 1849 aa13.88□□□□□ -0.19
HLA-DMB-259ENST00000438510 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
HLA-DMB-259ENST00000438510 TNS1Q9HBL0 1735 aaKnown RBP13.87□□□□□ -0.19
HLA-DMB-259ENST00000438510 PAPPAQ13219 1627 aa13.87□□□□□ -0.19
HLA-DMB-259ENST00000438510 NEUROD2Q15784 382 aa13.87□□□□□ -0.19
HLA-DMB-259ENST00000438510 FAM196AQ6ZSG2 479 aa13.87□□□□□ -0.19
HLA-DMB-259ENST00000438510 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
HLA-DMB-259ENST00000438510 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
HLA-DMB-259ENST00000438510 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
HLA-DMB-259ENST00000438510 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
HLA-DMB-259ENST00000438510 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
HLA-DMB-259ENST00000438510 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-259ENST00000438510 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
HLA-DMB-259ENST00000438510 RGPD3A6NKT7 1758 aaPredicted RBP13.84□□□□□ -0.19
HLA-DMB-259ENST00000438510 RGPD4Q7Z3J3 1758 aa13.84□□□□□ -0.19
HLA-DMB-259ENST00000438510 CALD1Q05682 793 aaKnown RBP13.84□□□□□ -0.19
HLA-DMB-259ENST00000438510 TEFQ10587 303 aa13.84□□□□□ -0.19
HLA-DMB-259ENST00000438510 FAM182BQ5T319 152 aa13.84□□□□□ -0.19
HLA-DMB-259ENST00000438510 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.19
HLA-DMB-259ENST00000438510 CABP4P57796 275 aa13.83□□□□□ -0.2
HLA-DMB-259ENST00000438510 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.2
HLA-DMB-259ENST00000438510 MCM10Q7L590 875 aa13.83□□□□□ -0.2
HLA-DMB-259ENST00000438510 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
HLA-DMB-259ENST00000438510 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms