RNA–Protein interactions for RNA: ENST00000438274.7

BECN1-202, Transcript of beclin 1, humanhuman

TSL 2 BASIC

Gene BECN1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-202ENST00000438274 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
BECN1-202ENST00000438274 NBPF6Q5VWK0 638 aa12.79□□□□□ -0.36
BECN1-202ENST00000438274 USHBP1Q8N6Y0 703 aa12.79□□□□□ -0.36
BECN1-202ENST00000438274 NBPF4Q96M43 638 aa12.79□□□□□ -0.36
BECN1-202ENST00000438274 COL3A1P02461 1466 aaPredicted RBP12.78□□□□□ -0.36
BECN1-202ENST00000438274 SPATA31A5Q5VU36 1347 aa12.78□□□□□ -0.36
BECN1-202ENST00000438274 SPATA31A7Q8IWB4 1347 aa12.78□□□□□ -0.36
BECN1-202ENST00000438274 IL13P35225 146 aa12.78□□□□□ -0.36
BECN1-202ENST00000438274 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
BECN1-202ENST00000438274 RGS12O14924 1447 aa12.78□□□□□ -0.36
BECN1-202ENST00000438274 SPATA31A1Q5TZJ5 1347 aa12.78□□□□□ -0.36
BECN1-202ENST00000438274 EYA1Q99502 592 aa12.77□□□□□ -0.36
BECN1-202ENST00000438274 U2SURPO15042 1029 aaKnown RBP12.77□□□□□ -0.37
BECN1-202ENST00000438274 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
BECN1-202ENST00000438274 CARD10Q9BWT7 1032 aa12.77□□□□□ -0.37
BECN1-202ENST00000438274 GLI3P10071 1580 aa12.76□□□□□ -0.37
BECN1-202ENST00000438274 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
BECN1-202ENST00000438274 TCP11L2Q8N4U5 519 aa12.76□□□□□ -0.37
BECN1-202ENST00000438274 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
BECN1-202ENST00000438274 A0A0G2JS52 829 aa12.75□□□□□ -0.37
BECN1-202ENST00000438274 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
BECN1-202ENST00000438274 MYT1Q01538 1121 aa12.75□□□□□ -0.37
BECN1-202ENST00000438274 MIER1Q8N108 512 aa12.75□□□□□ -0.37
BECN1-202ENST00000438274 IGSF1Q8N6C5 1336 aa12.74□□□□□ -0.37
BECN1-202ENST00000438274 HMOX1P09601 288 aa12.74□□□□□ -0.37
BECN1-202ENST00000438274 SULT6B1Q6IMI4 303 aa12.74□□□□□ -0.37
BECN1-202ENST00000438274 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
BECN1-202ENST00000438274 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
BECN1-202ENST00000438274 RGPD1P0DJD0 1748 aa12.74□□□□□ -0.37
BECN1-202ENST00000438274 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
BECN1-202ENST00000438274 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
BECN1-202ENST00000438274 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
BECN1-202ENST00000438274 THRAP3Q9Y2W1 955 aaKnown RBP12.73□□□□□ -0.37
BECN1-202ENST00000438274 WNK3Q9BYP7 1800 aa12.72□□□□□ -0.37
BECN1-202ENST00000438274 IL2RBP14784 551 aa12.72□□□□□ -0.37
BECN1-202ENST00000438274 BARGINQ6ZT62 677 aa12.72□□□□□ -0.37
BECN1-202ENST00000438274 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
BECN1-202ENST00000438274 MEGF6O75095 1541 aa12.71□□□□□ -0.37
BECN1-202ENST00000438274 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
BECN1-202ENST00000438274 SEPT12Q8IYM1 358 aa12.71□□□□□ -0.37
BECN1-202ENST00000438274 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
BECN1-202ENST00000438274 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
BECN1-202ENST00000438274 KDRP35968 1356 aa12.69□□□□□ -0.38
BECN1-202ENST00000438274 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
BECN1-202ENST00000438274 DISP2A7MBM2 1401 aa12.69□□□□□ -0.38
BECN1-202ENST00000438274 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
BECN1-202ENST00000438274 CCER2I3L3R5 266 aa12.69□□□□□ -0.38
BECN1-202ENST00000438274 CDCA7Q9BWT1 371 aaPredicted RBP12.69□□□□□ -0.38
BECN1-202ENST00000438274 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
BECN1-202ENST00000438274 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
BECN1-202ENST00000438274 DDB1Q16531 1140 aa12.68□□□□□ -0.38
BECN1-202ENST00000438274 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
BECN1-202ENST00000438274 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
BECN1-202ENST00000438274 EP400Q96L91 3159 aa12.68□□□□□ -0.38
BECN1-202ENST00000438274 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
BECN1-202ENST00000438274 EXOC5O00471 708 aa12.67□□□□□ -0.38
BECN1-202ENST00000438274 KRT27Q7Z3Y8 459 aa12.67□□□□□ -0.38
BECN1-202ENST00000438274 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
BECN1-202ENST00000438274 OVOS2A0A0G2JMS6 1433 aa12.67□□□□□ -0.38
BECN1-202ENST00000438274 BRWD3Q6RI45 1802 aa12.66□□□□□ -0.38
BECN1-202ENST00000438274 FCHSD2O94868 740 aa12.66□□□□□ -0.38
BECN1-202ENST00000438274 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
BECN1-202ENST00000438274 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
BECN1-202ENST00000438274 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
BECN1-202ENST00000438274 PDE3BQ13370 1112 aa12.65□□□□□ -0.38
BECN1-202ENST00000438274 CCDC146Q8IYE0 955 aa12.65□□□□□ -0.38
BECN1-202ENST00000438274 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
BECN1-202ENST00000438274 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
BECN1-202ENST00000438274 TNS2Q63HR2 1409 aa12.65□□□□□ -0.38
BECN1-202ENST00000438274 SPDYE4A6NLX3 237 aa12.64□□□□□ -0.39
BECN1-202ENST00000438274 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
BECN1-202ENST00000438274 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
BECN1-202ENST00000438274 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
BECN1-202ENST00000438274 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
BECN1-202ENST00000438274 SHANK3Q9BYB0 1731 aa12.64□□□□□ -0.39
BECN1-202ENST00000438274 NEFMP07197 916 aa12.64□□□□□ -0.39
BECN1-202ENST00000438274 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
BECN1-202ENST00000438274 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
BECN1-202ENST00000438274 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
BECN1-202ENST00000438274 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
BECN1-202ENST00000438274 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
BECN1-202ENST00000438274 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
BECN1-202ENST00000438274 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
BECN1-202ENST00000438274 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
BECN1-202ENST00000438274 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
BECN1-202ENST00000438274 CYP27B1O15528 508 aa12.62□□□□□ -0.39
BECN1-202ENST00000438274 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
BECN1-202ENST00000438274 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
BECN1-202ENST00000438274 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
BECN1-202ENST00000438274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■□□□ 11.9
BECN1-202ENST00000438274 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
BECN1-202ENST00000438274 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
BECN1-202ENST00000438274 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
BECN1-202ENST00000438274 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
BECN1-202ENST00000438274 PLEKHG2Q9H7P9 1386 aa12.6□□□□□ -0.39
BECN1-202ENST00000438274 PHKG2P15735 406 aa12.6□□□□□ -0.39
BECN1-202ENST00000438274 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
BECN1-202ENST00000438274 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
BECN1-202ENST00000438274 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
BECN1-202ENST00000438274 SF3B2Q13435 895 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 677.1 ms